ORF » Species Summary » Populus trichocarpa » LOC7475727 cDNA ORF clone

LOC7475727 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7475727 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7475727 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa07935 XM_002303230.3
Latest version!		 Populus trichocarpa caffeoylshikimate esterase (LOC7475727), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
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OPa07935 XM_002303230.2 Populus trichocarpa esterase/lipase/thioesterase family protein (POPTR_0003s05780g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7475727 ( XM_002303230.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002303266.1 Populus trichocarpa esterase/lipase/thioesterase family protein (POPTR_0003s05780g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa07935
    Clone ID Related Accession (Same CDS sequence) XM_002303230.2 , XM_002303230.3
    Accession Version XM_002303230.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 981bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product esterase/lipase/thioesterase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008469). On Dec 16, 2013 this sequence version replaced XM_002303230.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGCCATCCG AAGCGCAGCA GCCCGAAGCG CCACCCAACT TCTGGGGCGA CATGCCGGAG 
    GAGGAGTACT ATGCATCGCA AGGAGTGACC AATACCCAGT CACACTTTGA AACGCCGAAT 
    GGGAAGGTCT TCACGCAGGG TTTTCTCCCG TTGGATAAAA AGGTCAAAGC CACGGTGTAT 
    ATGACCCACG GCTACGGATC TGATACTGGC TGGCTGTTTC AGAAGATTTG CATCAACTTT 
    GCTACCTGGG GTTATGCTGT TTTTGCTGCT GATCTTCTTG GGCATGGCAG ATCAGACGGT 
    TTACGCTGCT ACATGGGCGA CATGGAGAAA ATTGCTGCAG CGTCCGTATC GTTCTTCAAG 
    CATGTGCGCT ACAGCGAGCC ATACAAGAAC TTGCCCGCCT TCTTATTTGG CGAGTCAATG 
    GGCGGACTAG CAACGATGCT GATGTATTTC CAATCAGAAC CTGACACGTG GACGGGCGTG 
    ATTTTCTCGG CCCCACTTTT CGTCATACCG GAACCAATGA AACCTAGTAA GGCACACCTA 
    TTCATGTATG GCCTGCTCTT TGGATTTGCT GACACGTGGG CGGCCATGCC AGACAACAAA 
    ATGGTAGGTA AAGCGATAAA GGACCCAGAG AAACTCAAGA TCATAGCATC CAACCCCAGA 
    AGATACACAG GCAAGCCTAG GGTGGGTACC ATGAGAGAAA TTGCCAGAGT CTGCCAATAC 
    ATACAGGACA ATTTCTCCAA GGTTACGGTG CCGTTTTTGA CTGTCCACGG GACCGCCGAT 
    GGGGTGACAT GCCCAACATC ATCACAGTTG TTGTATGAGA AAGCCTCGAG TGAGGATAAG 
    AGCTTGAAGA TGTACGAGGG CATGTACCAT TCTTTGATAC AAGGCGAGCC TGACGAAAAT 
    GCAAGTCTTG TCTTGAAGGA TATGAGAGAG TGGATCGATG AGAGGGTTGA GAGGTATGGG 
    TCTACAAAGA GTGATGATTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002303266.1
    CDS177..1157
    Translation

    Target ORF information:

    RefSeq Version XM_002303230.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa esterase/lipase/thioesterase family protein (POPTR_0003s05780g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002303230.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGCCATCCG AAGCGCAGCA GCCCGAAGCG CCACCCAACT TCTGGGGCGA CATGCCGGAG 
    GAGGAGTACT ATGCATCGCA AGGAGTGACC AATACCCAGT CACACTTTGA AACGCCGAAT 
    GGGAAGGTCT TCACGCAGGG TTTTCTCCCG TTGGATAAAA AGGTCAAAGC CACGGTGTAT 
    ATGACCCACG GCTACGGATC TGATACTGGC TGGCTGTTTC AGAAGATTTG CATCAACTTT 
    GCTACCTGGG GTTATGCTGT TTTTGCTGCT GATCTTCTTG GGCATGGCAG ATCAGACGGT 
    TTACGCTGCT ACATGGGCGA CATGGAGAAA ATTGCTGCAG CGTCCGTATC GTTCTTCAAG 
    CATGTGCGCT ACAGCGAGCC ATACAAGAAC TTGCCCGCCT TCTTATTTGG CGAGTCAATG 
    GGCGGACTAG CAACGATGCT GATGTATTTC CAATCAGAAC CTGACACGTG GACGGGCGTG 
    ATTTTCTCGG CCCCACTTTT CGTCATACCG GAACCAATGA AACCTAGTAA GGCACACCTA 
    TTCATGTATG GCCTGCTCTT TGGATTTGCT GACACGTGGG CGGCCATGCC AGACAACAAA 
    ATGGTAGGTA AAGCGATAAA GGACCCAGAG AAACTCAAGA TCATAGCATC CAACCCCAGA 
    AGATACACAG GCAAGCCTAG GGTGGGTACC ATGAGAGAAA TTGCCAGAGT CTGCCAATAC 
    ATACAGGACA ATTTCTCCAA GGTTACGGTG CCGTTTTTGA CTGTCCACGG GACCGCCGAT 
    GGGGTGACAT GCCCAACATC ATCACAGTTG TTGTATGAGA AAGCCTCGAG TGAGGATAAG 
    AGCTTGAAGA TGTACGAGGG CATGTACCAT TCTTTGATAC AAGGCGAGCC TGACGAAAAT 
    GCAAGTCTTG TCTTGAAGGA TATGAGAGAG TGGATCGATG AGAGGGTTGA GAGGTATGGG 
    TCTACAAAGA GTGATGATTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7475727 ( XM_002303230.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002303266.1 Populus trichocarpa caffeoylshikimate esterase (LOC7475727), mRNA.
    Price & Availability↑
    CloneID OPa07935
    Clone ID Related Accession (Same CDS sequence) XM_002303230.2 , XM_002303230.3
    Accession Version XM_002303230.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 981bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product caffeoylshikimate esterase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002303230.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGCCATCCG AAGCGCAGCA GCCCGAAGCG CCACCCAACT TCTGGGGCGA CATGCCGGAG 
    GAGGAGTACT ATGCATCGCA AGGAGTGACC AATACCCAGT CACACTTTGA AACGCCGAAT 
    GGGAAGGTCT TCACGCAGGG TTTTCTCCCG TTGGATAAAA AGGTCAAAGC CACGGTGTAT 
    ATGACCCACG GCTACGGATC TGATACTGGC TGGCTGTTTC AGAAGATTTG CATCAACTTT 
    GCTACCTGGG GTTATGCTGT TTTTGCTGCT GATCTTCTTG GGCATGGCAG ATCAGACGGT 
    TTACGCTGCT ACATGGGCGA CATGGAGAAA ATTGCTGCAG CGTCCGTATC GTTCTTCAAG 
    CATGTGCGCT ACAGCGAGCC ATACAAGAAC TTGCCCGCCT TCTTATTTGG CGAGTCAATG 
    GGCGGACTAG CAACGATGCT GATGTATTTC CAATCAGAAC CTGACACGTG GACGGGCGTG 
    ATTTTCTCGG CCCCACTTTT CGTCATACCG GAACCAATGA AACCTAGTAA GGCACACCTA 
    TTCATGTATG GCCTGCTCTT TGGATTTGCT GACACGTGGG CGGCCATGCC AGACAACAAA 
    ATGGTAGGTA AAGCGATAAA GGACCCAGAG AAACTCAAGA TCATAGCATC CAACCCCAGA 
    AGATACACAG GCAAGCCTAG GGTGGGTACC ATGAGAGAAA TTGCCAGAGT CTGCCAATAC 
    ATACAGGACA ATTTCTCCAA GGTTACGGTG CCGTTTTTGA CTGTCCACGG GACCGCCGAT 
    GGGGTGACAT GCCCAACATC ATCACAGTTG TTGTATGAGA AAGCCTCGAG TGAGGATAAG 
    AGCTTGAAGA TGTACGAGGG CATGTACCAT TCTTTGATAC AAGGCGAGCC TGACGAAAAT 
    GCAAGTCTTG TCTTGAAGGA TATGAGAGAG TGGATCGATG AGAGGGTTGA GAGGTATGGG 
    TCTACAAAGA GTGATGATTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002303266.1
    CDS254..1234
    Translation

    Target ORF information:

    RefSeq Version XM_002303230.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa caffeoylshikimate esterase (LOC7475727), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002303230.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGCCATCCG AAGCGCAGCA GCCCGAAGCG CCACCCAACT TCTGGGGCGA CATGCCGGAG 
    GAGGAGTACT ATGCATCGCA AGGAGTGACC AATACCCAGT CACACTTTGA AACGCCGAAT 
    GGGAAGGTCT TCACGCAGGG TTTTCTCCCG TTGGATAAAA AGGTCAAAGC CACGGTGTAT 
    ATGACCCACG GCTACGGATC TGATACTGGC TGGCTGTTTC AGAAGATTTG CATCAACTTT 
    GCTACCTGGG GTTATGCTGT TTTTGCTGCT GATCTTCTTG GGCATGGCAG ATCAGACGGT 
    TTACGCTGCT ACATGGGCGA CATGGAGAAA ATTGCTGCAG CGTCCGTATC GTTCTTCAAG 
    CATGTGCGCT ACAGCGAGCC ATACAAGAAC TTGCCCGCCT TCTTATTTGG CGAGTCAATG 
    GGCGGACTAG CAACGATGCT GATGTATTTC CAATCAGAAC CTGACACGTG GACGGGCGTG 
    ATTTTCTCGG CCCCACTTTT CGTCATACCG GAACCAATGA AACCTAGTAA GGCACACCTA 
    TTCATGTATG GCCTGCTCTT TGGATTTGCT GACACGTGGG CGGCCATGCC AGACAACAAA 
    ATGGTAGGTA AAGCGATAAA GGACCCAGAG AAACTCAAGA TCATAGCATC CAACCCCAGA 
    AGATACACAG GCAAGCCTAG GGTGGGTACC ATGAGAGAAA TTGCCAGAGT CTGCCAATAC 
    ATACAGGACA ATTTCTCCAA GGTTACGGTG CCGTTTTTGA CTGTCCACGG GACCGCCGAT 
    GGGGTGACAT GCCCAACATC ATCACAGTTG TTGTATGAGA AAGCCTCGAG TGAGGATAAG 
    AGCTTGAAGA TGTACGAGGG CATGTACCAT TCTTTGATAC AAGGCGAGCC TGACGAAAAT 
    GCAAGTCTTG TCTTGAAGGA TATGAGAGAG TGGATCGATG AGAGGGTTGA GAGGTATGGG 
    TCTACAAAGA GTGATGATTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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