ORF » Species Summary » Populus trichocarpa » POPTR_0013s03070g cDNA ORF clone

POPTR_0013s03070g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0013s03070g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0013s03070g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa27850 XM_002319546.3
Latest version!		 Populus trichocarpa bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (LOC7473892), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
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OPa27850 XM_002319546.2 Populus trichocarpa hypothetical protein (POPTR_0013s03070g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0013s03070g ( XM_002319546.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002319582.1 Populus trichocarpa bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (LOC7473892), mRNA.
    Price & Availability↑
    CloneID OPa27850
    Clone ID Related Accession (Same CDS sequence) XM_002319546.3 , XM_002319546.2
    Accession Version XM_002319546.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1566bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002319546.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

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    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGATCTCC AAAGCGCTGA CGGAGAGCGA AGAAATTCGA CACTGATATG TGCACCGATA 
    ATGGCAGAAT CAGTTGATCA AATGTTGGTT CAAATGAAAA GGGCGAAGGA GCTTGGGGCC 
    GACGTTGCTG AAGTTCGGGT GGATTTCTTG AAGAATTTCA GTCCTAGAAA TGATCTCGAA 
    GCCTTGATTA AACAATGCCC TTTACCCACT CTTATCACTT ACAGACCGAA ATGGGAAGGC 
    GGTCAGTATG ATGGTGATGA AAACAAGCGA CAAAAGGCAC TGCAAATAGC CATGGAATTG 
    GGAGCAGATT TTATAGACAT CGAACTTAAG GTAGCTCAAG AGTTTTATAA TTTCATTCAA 
    GGGAAGAAAC CTGAAAAGGT CAAGATCATT GTTTCTTCAC ACAACTACGA ATGCACTCCC 
    TCCATAGAGG AAATAGGTGA CCTTGTGGCC AGGATACAAG CTACTGGAGC TGATATAGTG 
    AAGGTTGCAA CAACTGCTTT AGACATTACA GATAATGCAC GGATGTTTCA CATAATTGTG 
    AATTTACAAG TTCCAATGAT AGGACTTGTT ATGGGCGAGA GAGGTTTAAT GTCAAGGGTG 
    CTTGCTGCAA AATATGGAGC CTTTCTCACT TTTGGTTCAA TTGAGGCAGG AGTGGTGTCT 
    GCTCCAGGGC AACCAACTGT CAAAGATTTA TTGGAACTTT ACAATCTCAG ACAGATTGAA 
    GCTGATACCA AAGTACATGG TGTTATTGGG AATCCTATTG GTCATAGCAA AAGTCCTCAC 
    CTCTATAATG CAGCATTTAA GTCAGTTGGC TTTAATGGAA TCTATCTGCC TCTGTTGGTT 
    GATAGTGTTG CAAATTATAT ATCCACGTAT TCATCTCCAG ACTTTGCTGG ATACAGTTAT 
    ACAATTCCTC ACAAAGAAGA TGGACTCAAG TGCTGCGATG AGGTCGATCC AATAGCGAAG 
    GAAATTGGAG CTATTAGTTG CATGATTAGG AGACCGGATG ACGGGAAACT AAAGGGCTAC 
    AATGTTGACT ATCTTGGAGC CATAGCAGCT ATTGAGGAGG CATTAGGAGC ATCCAATGGT 
    GCCCCTGCAT CTGTTTCACC GTTGGCAGGT AAACTCTTTG TTGTCATGGG AGCTGGTGGA 
    GCTGGAAAGG CCCTTGCTTA TGGTGCATAT GAGAAAGGAG CAAGAGTTGT TGTTGCCAAC 
    CGCACATATG GCAAGGCCAA GGAGCTTGCC AGTAAAGTAG GAGGACAAGC GATTGCTCTA 
    GCCAAACTAA AAGATTTTCA TCCAGAAGAA GGAATGATCC TTGCAAATAC CACATCTGTT 
    GGAATGAAAC CAAGAATAGA AGATACACCA CTTGCTAAGG AAGCTTTAAA ACACTATGCG 
    CTGGTCTTCG ACGCAATTTA CACGCCGAAA CTGACCACTC TCTTAAGAGA AGCACAGGAG 
    GCTGGAAGCA CCATTGTTTA TGGGACAGAG ATGTTCATCA ACCAAGCATT TGTACAGTTT 
    GAAAGGTTCA CTGGTTTGCC TGCACCAAAG CAACTCATTA GAGATGTGTT AGCAAGGAAT 
    ACATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002319582.1
    CDS171..1736
    Translation

    Target ORF information:

    RefSeq Version XM_002319546.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic (LOC7473892), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002319546.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGATCTCC AAAGCGCTGA CGGAGAGCGA AGAAATTCGA CACTGATATG TGCACCGATA 
    ATGGCAGAAT CAGTTGATCA AATGTTGGTT CAAATGAAAA GGGCGAAGGA GCTTGGGGCC 
    GACGTTGCTG AAGTTCGGGT GGATTTCTTG AAGAATTTCA GTCCTAGAAA TGATCTCGAA 
    GCCTTGATTA AACAATGCCC TTTACCCACT CTTATCACTT ACAGACCGAA ATGGGAAGGC 
    GGTCAGTATG ATGGTGATGA AAACAAGCGA CAAAAGGCAC TGCAAATAGC CATGGAATTG 
    GGAGCAGATT TTATAGACAT CGAACTTAAG GTAGCTCAAG AGTTTTATAA TTTCATTCAA 
    GGGAAGAAAC CTGAAAAGGT CAAGATCATT GTTTCTTCAC ACAACTACGA ATGCACTCCC 
    TCCATAGAGG AAATAGGTGA CCTTGTGGCC AGGATACAAG CTACTGGAGC TGATATAGTG 
    AAGGTTGCAA CAACTGCTTT AGACATTACA GATAATGCAC GGATGTTTCA CATAATTGTG 
    AATTTACAAG TTCCAATGAT AGGACTTGTT ATGGGCGAGA GAGGTTTAAT GTCAAGGGTG 
    CTTGCTGCAA AATATGGAGC CTTTCTCACT TTTGGTTCAA TTGAGGCAGG AGTGGTGTCT 
    GCTCCAGGGC AACCAACTGT CAAAGATTTA TTGGAACTTT ACAATCTCAG ACAGATTGAA 
    GCTGATACCA AAGTACATGG TGTTATTGGG AATCCTATTG GTCATAGCAA AAGTCCTCAC 
    CTCTATAATG CAGCATTTAA GTCAGTTGGC TTTAATGGAA TCTATCTGCC TCTGTTGGTT 
    GATAGTGTTG CAAATTATAT ATCCACGTAT TCATCTCCAG ACTTTGCTGG ATACAGTTAT 
    ACAATTCCTC ACAAAGAAGA TGGACTCAAG TGCTGCGATG AGGTCGATCC AATAGCGAAG 
    GAAATTGGAG CTATTAGTTG CATGATTAGG AGACCGGATG ACGGGAAACT AAAGGGCTAC 
    AATGTTGACT ATCTTGGAGC CATAGCAGCT ATTGAGGAGG CATTAGGAGC ATCCAATGGT 
    GCCCCTGCAT CTGTTTCACC GTTGGCAGGT AAACTCTTTG TTGTCATGGG AGCTGGTGGA 
    GCTGGAAAGG CCCTTGCTTA TGGTGCATAT GAGAAAGGAG CAAGAGTTGT TGTTGCCAAC 
    CGCACATATG GCAAGGCCAA GGAGCTTGCC AGTAAAGTAG GAGGACAAGC GATTGCTCTA 
    GCCAAACTAA AAGATTTTCA TCCAGAAGAA GGAATGATCC TTGCAAATAC CACATCTGTT 
    GGAATGAAAC CAAGAATAGA AGATACACCA CTTGCTAAGG AAGCTTTAAA ACACTATGCG 
    CTGGTCTTCG ACGCAATTTA CACGCCGAAA CTGACCACTC TCTTAAGAGA AGCACAGGAG 
    GCTGGAAGCA CCATTGTTTA TGGGACAGAG ATGTTCATCA ACCAAGCATT TGTACAGTTT 
    GAAAGGTTCA CTGGTTTGCC TGCACCAAAG CAACTCATTA GAGATGTGTT AGCAAGGAAT 
    ACATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0013s03070g ( XM_002319546.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002319582.1 Populus trichocarpa hypothetical protein (POPTR_0013s03070g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa27850
    Clone ID Related Accession (Same CDS sequence) XM_002319546.3 , XM_002319546.2
    Accession Version XM_002319546.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1566bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008479). On Dec 16, 2013 this sequence version replaced XM_002319546.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGATCTCC AAAGCGCTGA CGGAGAGCGA AGAAATTCGA CACTGATATG TGCACCGATA 
    ATGGCAGAAT CAGTTGATCA AATGTTGGTT CAAATGAAAA GGGCGAAGGA GCTTGGGGCC 
    GACGTTGCTG AAGTTCGGGT GGATTTCTTG AAGAATTTCA GTCCTAGAAA TGATCTCGAA 
    GCCTTGATTA AACAATGCCC TTTACCCACT CTTATCACTT ACAGACCGAA ATGGGAAGGC 
    GGTCAGTATG ATGGTGATGA AAACAAGCGA CAAAAGGCAC TGCAAATAGC CATGGAATTG 
    GGAGCAGATT TTATAGACAT CGAACTTAAG GTAGCTCAAG AGTTTTATAA TTTCATTCAA 
    GGGAAGAAAC CTGAAAAGGT CAAGATCATT GTTTCTTCAC ACAACTACGA ATGCACTCCC 
    TCCATAGAGG AAATAGGTGA CCTTGTGGCC AGGATACAAG CTACTGGAGC TGATATAGTG 
    AAGGTTGCAA CAACTGCTTT AGACATTACA GATAATGCAC GGATGTTTCA CATAATTGTG 
    AATTTACAAG TTCCAATGAT AGGACTTGTT ATGGGCGAGA GAGGTTTAAT GTCAAGGGTG 
    CTTGCTGCAA AATATGGAGC CTTTCTCACT TTTGGTTCAA TTGAGGCAGG AGTGGTGTCT 
    GCTCCAGGGC AACCAACTGT CAAAGATTTA TTGGAACTTT ACAATCTCAG ACAGATTGAA 
    GCTGATACCA AAGTACATGG TGTTATTGGG AATCCTATTG GTCATAGCAA AAGTCCTCAC 
    CTCTATAATG CAGCATTTAA GTCAGTTGGC TTTAATGGAA TCTATCTGCC TCTGTTGGTT 
    GATAGTGTTG CAAATTATAT ATCCACGTAT TCATCTCCAG ACTTTGCTGG ATACAGTTAT 
    ACAATTCCTC ACAAAGAAGA TGGACTCAAG TGCTGCGATG AGGTCGATCC AATAGCGAAG 
    GAAATTGGAG CTATTAGTTG CATGATTAGG AGACCGGATG ACGGGAAACT AAAGGGCTAC 
    AATGTTGACT ATCTTGGAGC CATAGCAGCT ATTGAGGAGG CATTAGGAGC ATCCAATGGT 
    GCCCCTGCAT CTGTTTCACC GTTGGCAGGT AAACTCTTTG TTGTCATGGG AGCTGGTGGA 
    GCTGGAAAGG CCCTTGCTTA TGGTGCATAT GAGAAAGGAG CAAGAGTTGT TGTTGCCAAC 
    CGCACATATG GCAAGGCCAA GGAGCTTGCC AGTAAAGTAG GAGGACAAGC GATTGCTCTA 
    GCCAAACTAA AAGATTTTCA TCCAGAAGAA GGAATGATCC TTGCAAATAC CACATCTGTT 
    GGAATGAAAC CAAGAATAGA AGATACACCA CTTGCTAAGG AAGCTTTAAA ACACTATGCG 
    CTGGTCTTCG ACGCAATTTA CACGCCGAAA CTGACCACTC TCTTAAGAGA AGCACAGGAG 
    GCTGGAAGCA CCATTGTTTA TGGGACAGAG ATGTTCATCA ACCAAGCATT TGTACAGTTT 
    GAAAGGTTCA CTGGTTTGCC TGCACCAAAG CAACTCATTA GAGATGTGTT AGCAAGGAAT 
    ACATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002319582.1
    CDS1..1566
    Translation

    Target ORF information:

    RefSeq Version XM_002319546.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0013s03070g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002319546.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGATCTCC AAAGCGCTGA CGGAGAGCGA AGAAATTCGA CACTGATATG TGCACCGATA 
    ATGGCAGAAT CAGTTGATCA AATGTTGGTT CAAATGAAAA GGGCGAAGGA GCTTGGGGCC 
    GACGTTGCTG AAGTTCGGGT GGATTTCTTG AAGAATTTCA GTCCTAGAAA TGATCTCGAA 
    GCCTTGATTA AACAATGCCC TTTACCCACT CTTATCACTT ACAGACCGAA ATGGGAAGGC 
    GGTCAGTATG ATGGTGATGA AAACAAGCGA CAAAAGGCAC TGCAAATAGC CATGGAATTG 
    GGAGCAGATT TTATAGACAT CGAACTTAAG GTAGCTCAAG AGTTTTATAA TTTCATTCAA 
    GGGAAGAAAC CTGAAAAGGT CAAGATCATT GTTTCTTCAC ACAACTACGA ATGCACTCCC 
    TCCATAGAGG AAATAGGTGA CCTTGTGGCC AGGATACAAG CTACTGGAGC TGATATAGTG 
    AAGGTTGCAA CAACTGCTTT AGACATTACA GATAATGCAC GGATGTTTCA CATAATTGTG 
    AATTTACAAG TTCCAATGAT AGGACTTGTT ATGGGCGAGA GAGGTTTAAT GTCAAGGGTG 
    CTTGCTGCAA AATATGGAGC CTTTCTCACT TTTGGTTCAA TTGAGGCAGG AGTGGTGTCT 
    GCTCCAGGGC AACCAACTGT CAAAGATTTA TTGGAACTTT ACAATCTCAG ACAGATTGAA 
    GCTGATACCA AAGTACATGG TGTTATTGGG AATCCTATTG GTCATAGCAA AAGTCCTCAC 
    CTCTATAATG CAGCATTTAA GTCAGTTGGC TTTAATGGAA TCTATCTGCC TCTGTTGGTT 
    GATAGTGTTG CAAATTATAT ATCCACGTAT TCATCTCCAG ACTTTGCTGG ATACAGTTAT 
    ACAATTCCTC ACAAAGAAGA TGGACTCAAG TGCTGCGATG AGGTCGATCC AATAGCGAAG 
    GAAATTGGAG CTATTAGTTG CATGATTAGG AGACCGGATG ACGGGAAACT AAAGGGCTAC 
    AATGTTGACT ATCTTGGAGC CATAGCAGCT ATTGAGGAGG CATTAGGAGC ATCCAATGGT 
    GCCCCTGCAT CTGTTTCACC GTTGGCAGGT AAACTCTTTG TTGTCATGGG AGCTGGTGGA 
    GCTGGAAAGG CCCTTGCTTA TGGTGCATAT GAGAAAGGAG CAAGAGTTGT TGTTGCCAAC 
    CGCACATATG GCAAGGCCAA GGAGCTTGCC AGTAAAGTAG GAGGACAAGC GATTGCTCTA 
    GCCAAACTAA AAGATTTTCA TCCAGAAGAA GGAATGATCC TTGCAAATAC CACATCTGTT 
    GGAATGAAAC CAAGAATAGA AGATACACCA CTTGCTAAGG AAGCTTTAAA ACACTATGCG 
    CTGGTCTTCG ACGCAATTTA CACGCCGAAA CTGACCACTC TCTTAAGAGA AGCACAGGAG 
    GCTGGAAGCA CCATTGTTTA TGGGACAGAG ATGTTCATCA ACCAAGCATT TGTACAGTTT 
    GAAAGGTTCA CTGGTTTGCC TGCACCAAAG CAACTCATTA GAGATGTGTT AGCAAGGAAT 
    ACATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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