ORF » Species Summary » Populus trichocarpa » POPTR_0001s09860g cDNA ORF clone

POPTR_0001s09860g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s09860g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s09860g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01014 XM_002297976.3
Latest version!		 Populus trichocarpa 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic (LOC7472744), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa01015 XM_006368704.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0001s09860g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
View Old Accession Versions >>
OPa01014 XM_002297976.2 Populus trichocarpa hypothetical protein (POPTR_0001s09860g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s09860g ( XM_002297976.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002298012.2 Populus trichocarpa hypothetical protein (POPTR_0001s09860g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa01014
    Clone ID Related Accession (Same CDS sequence) XM_002297976.2 , XM_002297976.3
    Accession Version XM_002297976.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 708bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002297976.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGGCCATTG CCACGGCCAC AAACTTGTAC ACTTCATATT CTCCAATAAC AACCAAAACC 
    CGCAATAACA AAAGTGTCTC TATTCCATTA CAACCTGGTG CTTACATCTC TAGGCATGTC 
    AAGTTCGCTG TACCAATTCA GAAAAGAACC ACACTTTCGA TATCAGCTGC AAGTACCACT 
    GCTATACAAG TAGATGGACC TACAACCTCT AGCAAAGCAT CAAAGACTTT GCCTTTCAGA 
    GTGGGTCATG GGTTTGATCT CCATAGGTTA GAACCTGGGT ACCCTTTGAT TATTGGTGGG 
    ATTGATGTGC CACATGATAG AGGATGTGAA GCTCACTCTG ATGGGGACGT GTTACTTCAT 
    TGTGTTGTGG ATGCAGTATT GGGTGCTCTG GGGCTCCCTG ATATCGGGCA GATATTCCCT 
    GATTCTGATC CCAAGTGGAA AGGAGCACCT TCATCTGTTT TTATCAAAGA AGCTGTGAGA 
    CTAATGCACG AGGCAGGTTA CGAGATTGGA AACTTGGATG CTACCTTGAT CCTTCAAAGG 
    CCAAAACTCA GCCCACACAA GGAGGCTATC AGGGCCAATT TGTCGGAACT GCTAGGAGCC 
    GACCCCTCTG TTGTAAATCT GAAAGCGAAA ACTCATGAAA AGGTCGATAG CCTTGGTGAA 
    AATAGAAGCA TCGCGGCGCA CACAGTGGTT CTTCTCATGA AGAAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002298012.2
    CDS97..804
    Translation

    Target ORF information:

    RefSeq Version XM_002297976.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s09860g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002297976.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGGCCATTG CCACGGCCAC AAACTTGTAC ACTTCATATT CTCCAATAAC AACCAAAACC 
    CGCAATAACA AAAGTGTCTC TATTCCATTA CAACCTGGTG CTTACATCTC TAGGCATGTC 
    AAGTTCGCTG TACCAATTCA GAAAAGAACC ACACTTTCGA TATCAGCTGC AAGTACCACT 
    GCTATACAAG TAGATGGACC TACAACCTCT AGCAAAGCAT CAAAGACTTT GCCTTTCAGA 
    GTGGGTCATG GGTTTGATCT CCATAGGTTA GAACCTGGGT ACCCTTTGAT TATTGGTGGG 
    ATTGATGTGC CACATGATAG AGGATGTGAA GCTCACTCTG ATGGGGACGT GTTACTTCAT 
    TGTGTTGTGG ATGCAGTATT GGGTGCTCTG GGGCTCCCTG ATATCGGGCA GATATTCCCT 
    GATTCTGATC CCAAGTGGAA AGGAGCACCT TCATCTGTTT TTATCAAAGA AGCTGTGAGA 
    CTAATGCACG AGGCAGGTTA CGAGATTGGA AACTTGGATG CTACCTTGAT CCTTCAAAGG 
    CCAAAACTCA GCCCACACAA GGAGGCTATC AGGGCCAATT TGTCGGAACT GCTAGGAGCC 
    GACCCCTCTG TTGTAAATCT GAAAGCGAAA ACTCATGAAA AGGTCGATAG CCTTGGTGAA 
    AATAGAAGCA TCGCGGCGCA CACAGTGGTT CTTCTCATGA AGAAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s09860g ( XM_002297976.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002298012.2 Populus trichocarpa 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic (LOC7472744), mRNA.
    Price & Availability↑
    CloneID OPa01014
    Clone ID Related Accession (Same CDS sequence) XM_002297976.2 , XM_002297976.3
    Accession Version XM_002297976.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 708bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002297976.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGGCCATTG CCACGGCCAC AAACTTGTAC ACTTCATATT CTCCAATAAC AACCAAAACC 
    CGCAATAACA AAAGTGTCTC TATTCCATTA CAACCTGGTG CTTACATCTC TAGGCATGTC 
    AAGTTCGCTG TACCAATTCA GAAAAGAACC ACACTTTCGA TATCAGCTGC AAGTACCACT 
    GCTATACAAG TAGATGGACC TACAACCTCT AGCAAAGCAT CAAAGACTTT GCCTTTCAGA 
    GTGGGTCATG GGTTTGATCT CCATAGGTTA GAACCTGGGT ACCCTTTGAT TATTGGTGGG 
    ATTGATGTGC CACATGATAG AGGATGTGAA GCTCACTCTG ATGGGGACGT GTTACTTCAT 
    TGTGTTGTGG ATGCAGTATT GGGTGCTCTG GGGCTCCCTG ATATCGGGCA GATATTCCCT 
    GATTCTGATC CCAAGTGGAA AGGAGCACCT TCATCTGTTT TTATCAAAGA AGCTGTGAGA 
    CTAATGCACG AGGCAGGTTA CGAGATTGGA AACTTGGATG CTACCTTGAT CCTTCAAAGG 
    CCAAAACTCA GCCCACACAA GGAGGCTATC AGGGCCAATT TGTCGGAACT GCTAGGAGCC 
    GACCCCTCTG TTGTAAATCT GAAAGCGAAA ACTCATGAAA AGGTCGATAG CCTTGGTGAA 
    AATAGAAGCA TCGCGGCGCA CACAGTGGTT CTTCTCATGA AGAAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002298012.2
    CDS113..820
    Translation

    Target ORF information:

    RefSeq Version XM_002297976.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic (LOC7472744), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002297976.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGGCCATTG CCACGGCCAC AAACTTGTAC ACTTCATATT CTCCAATAAC AACCAAAACC 
    CGCAATAACA AAAGTGTCTC TATTCCATTA CAACCTGGTG CTTACATCTC TAGGCATGTC 
    AAGTTCGCTG TACCAATTCA GAAAAGAACC ACACTTTCGA TATCAGCTGC AAGTACCACT 
    GCTATACAAG TAGATGGACC TACAACCTCT AGCAAAGCAT CAAAGACTTT GCCTTTCAGA 
    GTGGGTCATG GGTTTGATCT CCATAGGTTA GAACCTGGGT ACCCTTTGAT TATTGGTGGG 
    ATTGATGTGC CACATGATAG AGGATGTGAA GCTCACTCTG ATGGGGACGT GTTACTTCAT 
    TGTGTTGTGG ATGCAGTATT GGGTGCTCTG GGGCTCCCTG ATATCGGGCA GATATTCCCT 
    GATTCTGATC CCAAGTGGAA AGGAGCACCT TCATCTGTTT TTATCAAAGA AGCTGTGAGA 
    CTAATGCACG AGGCAGGTTA CGAGATTGGA AACTTGGATG CTACCTTGAT CCTTCAAAGG 
    CCAAAACTCA GCCCACACAA GGAGGCTATC AGGGCCAATT TGTCGGAACT GCTAGGAGCC 
    GACCCCTCTG TTGTAAATCT GAAAGCGAAA ACTCATGAAA AGGTCGATAG CCTTGGTGAA 
    AATAGAAGCA TCGCGGCGCA CACAGTGGTT CTTCTCATGA AGAAATGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s09860g ( XM_006368704.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006368766.1 Populus trichocarpa hypothetical protein (POPTR_0001s09860g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa01015
    Clone ID Related Accession (Same CDS sequence) XM_006368704.1
    Accession Version XM_006368704.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 528bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGGCCATTG CCACGGCCAC AAACTTGTAC ACTTCATATT CTCCAATAAC AACCAAAACC 
    CGCAATAACA AAAGTGTCTC TATTCCATTA CAACCTGGTG CTTACATCTC TAGGCATGTC 
    AAGTTCGCTG TACCAATTCA GAAAAGAACC ACACTTTCGA TATCAGCTGC AAGTACCACT 
    GCTATACAAG TAGATGGACC TACAACCTCT AGCAAAGCAT CAAAGACTTT GCCTTTCAGA 
    GTGGGTCATG GGTTTGATCT CCATAGGTTA GAACCTGGGT ACCCTTTGAT TATTGGTGGG 
    ATTGATGTGC CACATGATAG AGGATGTGAA GCTCACTCTG ATGGGGACGT GTTACTTCAT 
    TGTGTTGTGG ATGCAGTATT GGGTGCTCTG GGGCTCCCTG ATATCGGGCA GATATTCCCT 
    GATTCTGATC CCAAGTGGAA AGGAGCACCT TCATCTGTTT TTATCAAAGA AGCTGTGTTA 
    AAGGTAGAGT ATCCGATCTG CGAGGAAGCA ATTCTGATAG TGCTCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006368766.1
    CDS97..624
    Translation

    Target ORF information:

    RefSeq Version XM_006368704.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s09860g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006368704.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGGCCATTG CCACGGCCAC AAACTTGTAC ACTTCATATT CTCCAATAAC AACCAAAACC 
    CGCAATAACA AAAGTGTCTC TATTCCATTA CAACCTGGTG CTTACATCTC TAGGCATGTC 
    AAGTTCGCTG TACCAATTCA GAAAAGAACC ACACTTTCGA TATCAGCTGC AAGTACCACT 
    GCTATACAAG TAGATGGACC TACAACCTCT AGCAAAGCAT CAAAGACTTT GCCTTTCAGA 
    GTGGGTCATG GGTTTGATCT CCATAGGTTA GAACCTGGGT ACCCTTTGAT TATTGGTGGG 
    ATTGATGTGC CACATGATAG AGGATGTGAA GCTCACTCTG ATGGGGACGT GTTACTTCAT 
    TGTGTTGTGG ATGCAGTATT GGGTGCTCTG GGGCTCCCTG ATATCGGGCA GATATTCCCT 
    GATTCTGATC CCAAGTGGAA AGGAGCACCT TCATCTGTTT TTATCAAAGA AGCTGTGTTA 
    AAGGTAGAGT ATCCGATCTG CGAGGAAGCA ATTCTGATAG TGCTCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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