ORF » Species Summary » Populus trichocarpa » POPTR_0006s25820g cDNA ORF clone

POPTR_0006s25820g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0006s25820g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0006s25820g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa14769 XM_002308581.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0006s25820g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa430825 XM_024602488.1
Latest version!		 Populus trichocarpa aspartate aminotransferase, cytoplasmic (LOC7471541), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0006s25820g ( XM_002308581.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002308617.2 Populus trichocarpa hypothetical protein (POPTR_0006s25820g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa14769
    Clone ID Related Accession (Same CDS sequence) XM_002308581.2
    Accession Version XM_002308581.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1440bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008472). On Dec 16, 2013 this sequence version replaced XM_002308581.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGTGATTT GGGCACTGCA AGACGATGCA TGCATCACTT ATATCCACGC GTTAGCCAAG 
    ACAACCAGTA ACAGAAGCAG AAACAGTAGC AAAAACAGAA ACTCTCACCC CATGGAATCT 
    CTGAGTACCA AGGAGACAAC AACCAAGGAC TGCAATGGAG ACTCTGTGTT TGAAAATGTT 
    GTTAGAGCTC CTGATGTTCC AGTTTATGCG TTAAATTGTA CAGAGAAATT TAAGTATCGT 
    GTGGAATTTT CAAAGAATGT TAATTATAGC TTGGTCATGG TTGCTTATAG CAAGGACCCT 
    AGCCCAGTTA AGCTGAATTT GGGTATTGGT GTTTACCGGA CGGAGGATGG AAAACCTCAT 
    GTTTTGAATG TGGTTAGACG AGTAGAGAAG CTACTACTTG ATGATGTGTC TGCTACTAAG 
    GAGTATCTCC CTATTACTGG AATGGCAGAA TTTAATAAAT TGAGTGCTCA GCTTGTTTTC 
    GGTGCTGACA GCCCAGCTAT GAAAGAGAAC AGAGTGACTA CAGTCCAATG CTTGGCTGGT 
    TGTGGTTCAC TGAGGACTGG AGCTGATTTT TTAGCAAAGC ATTACCACCA ACACACAGTC 
    TATCTTTCCC AGCCAACATA TGGAAACCAT CCAAATTTTT TCTTAGCAGC TGGTCTAACT 
    TTGAAAACTT ACCGTTACTA TGACCCAATA ACACGAGGGC TGGACTTCCA AGGAATGCTG 
    GATGACCTTG GTTCTGCACC TTCTGGAGCC ATTGTGCTTT TCCAAGTATG CAGTCATAAC 
    CCTACTGGTG TTGATCCAAC TCTTCATCAG TGGGAGCAGA TTAGACAGTT GGTGAGATCA 
    AAAGGACTGC TACCTTTCTT TGATAATGCC TACCAGGGCA TTGTAAGCGG AAGTTTGGAT 
    ATGGATGCGC AGTCTGTTCG AATGTTTGTT ACAGATGGTG GTGAATGCCT TGTAGCTCAC 
    TCCTATTCAA AGATTATGGG ACTCTATGGA GAACGTGTTG GGGCACTTAG CATTGTGTGC 
    AAGACAGCAG ATGTGGCGAA GCGGGTTGAG AGCCAGCTGA AACTTGTGAT CAGACCTATG 
    TATTCAAACC CACCAATTCA CGGGGCAAGC ATTGTGACTG CTATATTGAA GGACAGGGAA 
    ATGTTTGATG AATGGACTGT TGAGTTGAAG GCAATGATTG ATCGTATTAT TCACCTGCGC 
    CAGCAACTTT ACGATGCTTT GCGTGATAGA GGTACACCTG GGGACTGGAG CCACATTATG 
    AAGCAGGTTG GGATGTATAC TTTCTCAGGA TTGAATGCTG AGCAAGTTGC CTTCATGAAC 
    AAAGAGTACC ATATCTACAT GTCATCTGAT GGGAGGATCA ACATGGCAGG CCTGAGTGCT 
    AAGACTGTCC CCTATCTAGC TGATGCAATT CATTCAGCTG TTACAGGGAT CAATTTATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002308617.2
    CDS1..1440
    Translation

    Target ORF information:

    RefSeq Version XM_002308581.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0006s25820g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002308581.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGTGATTT GGGCACTGCA AGACGATGCA TGCATCACTT ATATCCACGC GTTAGCCAAG 
    ACAACCAGTA ACAGAAGCAG AAACAGTAGC AAAAACAGAA ACTCTCACCC CATGGAATCT 
    CTGAGTACCA AGGAGACAAC AACCAAGGAC TGCAATGGAG ACTCTGTGTT TGAAAATGTT 
    GTTAGAGCTC CTGATGTTCC AGTTTATGCG TTAAATTGTA CAGAGAAATT TAAGTATCGT 
    GTGGAATTTT CAAAGAATGT TAATTATAGC TTGGTCATGG TTGCTTATAG CAAGGACCCT 
    AGCCCAGTTA AGCTGAATTT GGGTATTGGT GTTTACCGGA CGGAGGATGG AAAACCTCAT 
    GTTTTGAATG TGGTTAGACG AGTAGAGAAG CTACTACTTG ATGATGTGTC TGCTACTAAG 
    GAGTATCTCC CTATTACTGG AATGGCAGAA TTTAATAAAT TGAGTGCTCA GCTTGTTTTC 
    GGTGCTGACA GCCCAGCTAT GAAAGAGAAC AGAGTGACTA CAGTCCAATG CTTGGCTGGT 
    TGTGGTTCAC TGAGGACTGG AGCTGATTTT TTAGCAAAGC ATTACCACCA ACACACAGTC 
    TATCTTTCCC AGCCAACATA TGGAAACCAT CCAAATTTTT TCTTAGCAGC TGGTCTAACT 
    TTGAAAACTT ACCGTTACTA TGACCCAATA ACACGAGGGC TGGACTTCCA AGGAATGCTG 
    GATGACCTTG GTTCTGCACC TTCTGGAGCC ATTGTGCTTT TCCAAGTATG CAGTCATAAC 
    CCTACTGGTG TTGATCCAAC TCTTCATCAG TGGGAGCAGA TTAGACAGTT GGTGAGATCA 
    AAAGGACTGC TACCTTTCTT TGATAATGCC TACCAGGGCA TTGTAAGCGG AAGTTTGGAT 
    ATGGATGCGC AGTCTGTTCG AATGTTTGTT ACAGATGGTG GTGAATGCCT TGTAGCTCAC 
    TCCTATTCAA AGATTATGGG ACTCTATGGA GAACGTGTTG GGGCACTTAG CATTGTGTGC 
    AAGACAGCAG ATGTGGCGAA GCGGGTTGAG AGCCAGCTGA AACTTGTGAT CAGACCTATG 
    TATTCAAACC CACCAATTCA CGGGGCAAGC ATTGTGACTG CTATATTGAA GGACAGGGAA 
    ATGTTTGATG AATGGACTGT TGAGTTGAAG GCAATGATTG ATCGTATTAT TCACCTGCGC 
    CAGCAACTTT ACGATGCTTT GCGTGATAGA GGTACACCTG GGGACTGGAG CCACATTATG 
    AAGCAGGTTG GGATGTATAC TTTCTCAGGA TTGAATGCTG AGCAAGTTGC CTTCATGAAC 
    AAAGAGTACC ATATCTACAT GTCATCTGAT GGGAGGATCA ACATGGCAGG CCTGAGTGCT 
    AAGACTGTCC CCTATCTAGC TGATGCAATT CATTCAGCTG TTACAGGGAT CAATTTATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0006s25820g ( XM_024602488.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024458256.1 Populus trichocarpa aspartate aminotransferase, cytoplasmic (LOC7471541), mRNA.
    Price & Availability↑
    CloneID OPa430825
    Clone ID Related Accession (Same CDS sequence) XM_024602488.1
    Accession Version XM_024602488.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1266bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product aspartate aminotransferase, cytoplasmic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGAATCTC TGAGTACCAA GGAGACAACA ACCAAGGACT GCAATGGAGA CTCTGTGTTT 
    GAAAATGTTG TTAGAGCTCC TGATGTTCCA GTTTATGCGG TCATGGTTGC TTATAGCAAG 
    GACCCTAGCC CAGTTAAGCT GAATTTGGGT ATTGGTGTTT ACCGGACGGA GGATGGAAAA 
    CCTCATGTTT TGAATGTGGT TAGACGAGTA GAGAAGCTAC TACTTGATGA TGTGTCTGCT 
    ACTAAGGAGT ATCTCCCTAT TACTGGAATG GCAGAATTTA ATAAATTGAG TGCTCAGCTT 
    GTTTTCGGTG CTGACAGCCC AGCTATGAAA GAGAACAGAG TGACTACAGT CCAATGCTTG 
    GCTGGTTGTG GTTCACTGAG GACTGGAGCT GATTTTTTAG CAAAGCATTA CCACCAACAC 
    ACAGTCTATC TTTCCCAGCC AACATATGGA AACCATCCAA ATTTTTTCTT AGCAGCTGGT 
    CTAACTTTGA AAACTTACCG TTACTATGAC CCAATAACAC GAGGGCTGGA CTTCCAAGGA 
    ATGCTGGATG ACCTTGGTTC TGCACCTTCT GGAGCCATTG TGCTTTTCCA AGTATGCAGT 
    CATAACCCTA CTGGTGTTGA TCCAACTCTT CATCAGTGGG AGCAGATTAG ACAGTTGGTG 
    AGATCAAAAG GACTGCTACC TTTCTTTGAT AATGCCTACC AGGGCATTGT AAGCGGAAGT 
    TTGGATATGG ATGCGCAGTC TGTTCGAATG TTTGTTACAG ATGGTGGTGA ATGCCTTGTA 
    GCTCACTCCT ATTCAAAGAT TATGGGACTC TATGGAGAAC GTGTTGGGGC ACTTAGCATT 
    GTGTGCAAGA CAGCAGATGT GGCGAAGCGG GTTGAGAGCC AGCTGAAACT TGTGATCAGA 
    CCTATGTATT CAAACCCACC AATTCACGGG GCAAGCATTG TGACTGCTAT ATTGAAGGAC 
    AGGGAAATGT TTGATGAATG GACTGTTGAG TTGAAGGCAA TGATTGATCG TATTATTCAC 
    CTGCGCCAGC AACTTTACGA TGCTTTGCGT GATAGAGGTA CACCTGGGGA CTGGAGCCAC 
    ATTATGAAGC AGGTTGGGAT GTATACTTTC TCAGGATTGA ATGCTGAGCA AGTTGCCTTC 
    ATGACCAAAG AGTACCATAT CTACATGTCA TCTGATGGGA GGATCAACAT GGCAGGCCTG 
    AGTGCTAAGA CTGTCCCCTA TCTAGCTGAT GCAATTCATT CAGCTGTTAC AGGGATCAAT 
    TTATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024458256.1
    CDS75..1340
    Translation

    Target ORF information:

    RefSeq Version XM_024602488.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa aspartate aminotransferase, cytoplasmic (LOC7471541), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024602488.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGAATCTC TGAGTACCAA GGAGACAACA ACCAAGGACT GCAATGGAGA CTCTGTGTTT 
    GAAAATGTTG TTAGAGCTCC TGATGTTCCA GTTTATGCGG TCATGGTTGC TTATAGCAAG 
    GACCCTAGCC CAGTTAAGCT GAATTTGGGT ATTGGTGTTT ACCGGACGGA GGATGGAAAA 
    CCTCATGTTT TGAATGTGGT TAGACGAGTA GAGAAGCTAC TACTTGATGA TGTGTCTGCT 
    ACTAAGGAGT ATCTCCCTAT TACTGGAATG GCAGAATTTA ATAAATTGAG TGCTCAGCTT 
    GTTTTCGGTG CTGACAGCCC AGCTATGAAA GAGAACAGAG TGACTACAGT CCAATGCTTG 
    GCTGGTTGTG GTTCACTGAG GACTGGAGCT GATTTTTTAG CAAAGCATTA CCACCAACAC 
    ACAGTCTATC TTTCCCAGCC AACATATGGA AACCATCCAA ATTTTTTCTT AGCAGCTGGT 
    CTAACTTTGA AAACTTACCG TTACTATGAC CCAATAACAC GAGGGCTGGA CTTCCAAGGA 
    ATGCTGGATG ACCTTGGTTC TGCACCTTCT GGAGCCATTG TGCTTTTCCA AGTATGCAGT 
    CATAACCCTA CTGGTGTTGA TCCAACTCTT CATCAGTGGG AGCAGATTAG ACAGTTGGTG 
    AGATCAAAAG GACTGCTACC TTTCTTTGAT AATGCCTACC AGGGCATTGT AAGCGGAAGT 
    TTGGATATGG ATGCGCAGTC TGTTCGAATG TTTGTTACAG ATGGTGGTGA ATGCCTTGTA 
    GCTCACTCCT ATTCAAAGAT TATGGGACTC TATGGAGAAC GTGTTGGGGC ACTTAGCATT 
    GTGTGCAAGA CAGCAGATGT GGCGAAGCGG GTTGAGAGCC AGCTGAAACT TGTGATCAGA 
    CCTATGTATT CAAACCCACC AATTCACGGG GCAAGCATTG TGACTGCTAT ATTGAAGGAC 
    AGGGAAATGT TTGATGAATG GACTGTTGAG TTGAAGGCAA TGATTGATCG TATTATTCAC 
    CTGCGCCAGC AACTTTACGA TGCTTTGCGT GATAGAGGTA CACCTGGGGA CTGGAGCCAC 
    ATTATGAAGC AGGTTGGGAT GTATACTTTC TCAGGATTGA ATGCTGAGCA AGTTGCCTTC 
    ATGACCAAAG AGTACCATAT CTACATGTCA TCTGATGGGA GGATCAACAT GGCAGGCCTG 
    AGTGCTAAGA CTGTCCCCTA TCTAGCTGAT GCAATTCATT CAGCTGTTAC AGGGATCAAT 
    TTATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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