POPTR_0001s31970g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s31970g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s31970g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa00381 XM_002300149.2
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0001s31970g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa420223 XM_002300149.3
Latest version!
Populus trichocarpa uncharacterized LOC7461680 (LOC7461680), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa00381
    Clone ID Related Accession (Same CDS sequence) XM_002300149.2
    Accession Version XM_002300149.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 915bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002300149.1. COMPLETENESS: incomplete on both ends.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGCTTTCGT TGCGCCTCCG CTCCTCAGTT TGCAAGACCC TTCCTCCTCA AAAATTCTTT 
    CAATTCTTTA GCCATCAAAA GACCAGTGAT GACCAAACAC ACGGCTTTCC TCCACTTCCC
    GCAACGAAAA CGAACTCCGG TCTCAAAGAA GAGGAGAAAG GAGGAATAGA GCAAGCTATG
    CAGTTGCCGG AGGGATTACG CAGAGAGTCC ATGCCCCGGC ATGTTGCTGT AATCATGGAC
    GGAAATTCCA GGTGGGCTCG GCAACGAGGG ATGCTCACAC CTTCTGGTCA TGAAGCTGGC
    GTGAGGTCAT TGAAAGAGTT TATAAGGCTT TGCCTTCAAT GGGGTATTAA GGTTGTCACC
    GTTTTTGCAT TTTCTATAGA TAATTGGACT AGGCCTAAGG AGGAGGTTGA TATCGTCATG
    ACTATGATTG AGAATCTGTT AAAGTCTGGT TTGGATGATT TTATCAGGGA AGGTACTCGA
    GTCTCTATAA TAGGTGATAC CTCAAGGGTC CCAAAGTCTT TGCAGAGAAC GATATGTGAC
    ATAGAAGAGA TGACAAGAGA GAACTCAAAA TTCCATTTCA TCATGGCTAT CAGCTATAGC
    GGGACATATG ATGTTGTACA AGCATGCAAA AGTGTTGCTC AAAAGGTAAA GGATGGTGTT
    ATTCAAGTGG AGGACATCAA TGAAAGTGCA GTTCAACAGG AATTAGAAAC CAAGTGTTGC
    GAGTTTCCTT GTCCTGATTT GTTAATAAGA ACAAGTGGTG AACTTAGAAT TAGCAATTTT
    TTGCTGTGGC AGTCAGCCTA TAGTGAGCTT TTCTTCGCAA AAGCACTATG GCCTGATTTT
    GGAAAGGCTG ATTTTGTAGA GGCCTTAACT TCATATCAGC ATAGGCAGAG ACGTTATGGT
    GGTCGATATT CATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002300185.2
    CDS1..915
    Translation

    Target ORF information:

    RefSeq Version XM_002300149.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s31970g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002300149.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGCTTTCGT TGCGCCTCCG CTCCTCAGTT TGCAAGACCC TTCCTCCTCA AAAATTCTTT 
    CAATTCTTTA GCCATCAAAA GACCAGTGAT GACCAAACAC ACGGCTTTCC TCCACTTCCC
    GCAACGAAAA CGAACTCCGG TCTCAAAGAA GAGGAGAAAG GAGGAATAGA GCAAGCTATG
    CAGTTGCCGG AGGGATTACG CAGAGAGTCC ATGCCCCGGC ATGTTGCTGT AATCATGGAC
    GGAAATTCCA GGTGGGCTCG GCAACGAGGG ATGCTCACAC CTTCTGGTCA TGAAGCTGGC
    GTGAGGTCAT TGAAAGAGTT TATAAGGCTT TGCCTTCAAT GGGGTATTAA GGTTGTCACC
    GTTTTTGCAT TTTCTATAGA TAATTGGACT AGGCCTAAGG AGGAGGTTGA TATCGTCATG
    ACTATGATTG AGAATCTGTT AAAGTCTGGT TTGGATGATT TTATCAGGGA AGGTACTCGA
    GTCTCTATAA TAGGTGATAC CTCAAGGGTC CCAAAGTCTT TGCAGAGAAC GATATGTGAC
    ATAGAAGAGA TGACAAGAGA GAACTCAAAA TTCCATTTCA TCATGGCTAT CAGCTATAGC
    GGGACATATG ATGTTGTACA AGCATGCAAA AGTGTTGCTC AAAAGGTAAA GGATGGTGTT
    ATTCAAGTGG AGGACATCAA TGAAAGTGCA GTTCAACAGG AATTAGAAAC CAAGTGTTGC
    GAGTTTCCTT GTCCTGATTT GTTAATAAGA ACAAGTGGTG AACTTAGAAT TAGCAATTTT
    TTGCTGTGGC AGTCAGCCTA TAGTGAGCTT TTCTTCGCAA AAGCACTATG GCCTGATTTT
    GGAAAGGCTG ATTTTGTAGA GGCCTTAACT TCATATCAGC ATAGGCAGAG ACGTTATGGT
    GGTCGATATT CATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa420223
    Clone ID Related Accession (Same CDS sequence) XM_002300149.3
    Accession Version XM_002300149.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1476bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product uncharacterized protein LOC7461680
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002300149.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 43% of CDS bases ##RefSeq-Attributes-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGCTTTCGT TGCGCCTCCG CTCCTCAGTT TGCAAGACCC TTCCTCCTCA AAAATTCTTT 
    CAATTCTTTA GCCATCAAAA GACCAGTGAT GACCAAACAC ACGGCTTTCC TCCACTTCCC
    GCAACGAAAA CGAACTCCGG TCTCAAAGAA GAGGAGAAAG GAGGAATAGA GCAAGCTATG
    CAGTTGCCGG AGGGATTACG CAGAGAGTCC ATGCCCCGGC ATGTTGCTGT AATCATGGAC
    GGAAATTCCA GGTGGGCTCG GCAACGAGGG ATGCTCACAC CTTCTGGTCA TGAAGCTGGC
    GTGAGGTCAT TGAAAGAGTT TATAAGGCTT TGCCTTCAAT GGGGTATTAA GGTTGTCACC
    GTTTTTGCAT TTTCTATAGA TAATTGGACT AGGCCTAAGG AGGAGGTTGA TATCGTCATG
    ACTATGATTG AGAATCTGTT AAAGTCTGGT TTGGATGATT TTATCAGGGA AGGTACTCGA
    GTCTCTATAA TAGGTGATAC CTCAAGGGTC CCAAAGTCTT TGCAGAGAAC GATATGTGAC
    ATAGAAGAGA TGACAAGAGA GAACTCAAAA TTCCATTTCA TCATGGCTAT CAGCTATAGC
    GGGACATATG ATGTTGTACA AGCATGCAAA AGTGTTGCTC AAAAGGTAAA GGATGGTGTT
    ATTCAAGTGG AGGACATCAA TGAAAGTGCA GTTCAACAGG AATTAGAAAC CAAGTGTTGC
    GAGTTTCCTT GTCCTGATTT GTTAATAAGA ACAAGTGGTG AACTTAGAAT TAGCAATTTT
    TTGCTGTGGC AGTCAGCCTA TAGTGAGCTT TTCTTCGCAA AAGCACTATG GAGTTCTGGT
    AGTAAGATGT GGGGATATGA TAGTGGAACT TATGTGATAC CTAAGAATAC TGAGGAGGAG
    GATGCTATTT CGATAGATAC ATGGGAAGTA AACAATGCAA AGATTATTAC TTGGATCAAC
    AATTCTGTTG AGCATTCCAT AGATACTCTT GAGCAAAATG GAGTTGCTGA AAGAAAACAT
    AGGAACGTTG TCGAAACTGC TCGTTTTCTC TTGTTGTCTA CTTCTATTCC TAGTGAGTTT
    AAGGGAGAAG CTATCCTTAC TGCTAACGCA ATAAGTTGTC CTCCCAATTT GTTATTTGTG
    TCTTTCTGGG TTATGGTGAA GGTACTGACA CTTTACTCTC CAGCACACCT AAAGCTTCAT
    TATCATCTAC AACTTCTCAA GCTTTATATG AGATTGTGGA TCCATCTCTA TGTCAATCCA
    TATGCATTTG TAATTATTGA TCCTCTTTGG CAGTGGGCTA TGGATGAGGA ACCTTTTGTT
    TTGCATAAGA TAGATGCTTG GGATCTGTAT AGTATGGATT ATGAGAAGAC ATTTGCCCCA
    GTTGCAAAAA TGACTACTAT TTGTACTCTT ATTGCAGTAG CTTTGATTCG TCAGTGGTCG
    TATCATTATA TCTTCATCAA CAATGTTCTG GTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002300185.3
    CDS31..1506
    Translation

    Target ORF information:

    RefSeq Version XM_002300149.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa uncharacterized LOC7461680 (LOC7461680), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002300149.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGCTTTCGT TGCGCCTCCG CTCCTCAGTT TGCAAGACCC TTCCTCCTCA AAAATTCTTT 
    CAATTCTTTA GCCATCAAAA GACCAGTGAT GACCAAACAC ACGGCTTTCC TCCACTTCCC
    GCAACGAAAA CGAACTCCGG TCTCAAAGAA GAGGAGAAAG GAGGAATAGA GCAAGCTATG
    CAGTTGCCGG AGGGATTACG CAGAGAGTCC ATGCCCCGGC ATGTTGCTGT AATCATGGAC
    GGAAATTCCA GGTGGGCTCG GCAACGAGGG ATGCTCACAC CTTCTGGTCA TGAAGCTGGC
    GTGAGGTCAT TGAAAGAGTT TATAAGGCTT TGCCTTCAAT GGGGTATTAA GGTTGTCACC
    GTTTTTGCAT TTTCTATAGA TAATTGGACT AGGCCTAAGG AGGAGGTTGA TATCGTCATG
    ACTATGATTG AGAATCTGTT AAAGTCTGGT TTGGATGATT TTATCAGGGA AGGTACTCGA
    GTCTCTATAA TAGGTGATAC CTCAAGGGTC CCAAAGTCTT TGCAGAGAAC GATATGTGAC
    ATAGAAGAGA TGACAAGAGA GAACTCAAAA TTCCATTTCA TCATGGCTAT CAGCTATAGC
    GGGACATATG ATGTTGTACA AGCATGCAAA AGTGTTGCTC AAAAGGTAAA GGATGGTGTT
    ATTCAAGTGG AGGACATCAA TGAAAGTGCA GTTCAACAGG AATTAGAAAC CAAGTGTTGC
    GAGTTTCCTT GTCCTGATTT GTTAATAAGA ACAAGTGGTG AACTTAGAAT TAGCAATTTT
    TTGCTGTGGC AGTCAGCCTA TAGTGAGCTT TTCTTCGCAA AAGCACTATG GAGTTCTGGT
    AGTAAGATGT GGGGATATGA TAGTGGAACT TATGTGATAC CTAAGAATAC TGAGGAGGAG
    GATGCTATTT CGATAGATAC ATGGGAAGTA AACAATGCAA AGATTATTAC TTGGATCAAC
    AATTCTGTTG AGCATTCCAT AGATACTCTT GAGCAAAATG GAGTTGCTGA AAGAAAACAT
    AGGAACGTTG TCGAAACTGC TCGTTTTCTC TTGTTGTCTA CTTCTATTCC TAGTGAGTTT
    AAGGGAGAAG CTATCCTTAC TGCTAACGCA ATAAGTTGTC CTCCCAATTT GTTATTTGTG
    TCTTTCTGGG TTATGGTGAA GGTACTGACA CTTTACTCTC CAGCACACCT AAAGCTTCAT
    TATCATCTAC AACTTCTCAA GCTTTATATG AGATTGTGGA TCCATCTCTA TGTCAATCCA
    TATGCATTTG TAATTATTGA TCCTCTTTGG CAGTGGGCTA TGGATGAGGA ACCTTTTGTT
    TTGCATAAGA TAGATGCTTG GGATCTGTAT AGTATGGATT ATGAGAAGAC ATTTGCCCCA
    GTTGCAAAAA TGACTACTAT TTGTACTCTT ATTGCAGTAG CTTTGATTCG TCAGTGGTCG
    TATCATTATA TCTTCATCAA CAATGTTCTG GTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D