ORF » Species Summary » Populus trichocarpa » LOC7460095 cDNA ORF clone

LOC7460095 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7460095 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7460095 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa20796 XM_002312816.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0009s15940g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa436030 XM_002312816.3
Latest version!		 Populus trichocarpa geranylgeranyl diphosphate reductase, chloroplastic (LOC7460095), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7460095 ( XM_002312816.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002312852.2 Populus trichocarpa hypothetical protein (POPTR_0009s15940g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa20796
    Clone ID Related Accession (Same CDS sequence) XM_002312816.2
    Accession Version XM_002312816.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1089bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008475). On Dec 16, 2013 this sequence version replaced XM_002312816.1. COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGATCGACG AGTTTTCCAT CCCTCTTCAC CTCATCGACC GACATGTCAC TCGCATGAAG 
    ATCATCTCTC CTTCGAACCT GACCGTTGAT TTCGGATCGA AAACATTAAA GTCTCATGAG 
    TTTATCCCCA TGTTGCGCCG CGAAGTACTG GATTCTTTTC TCCGGTCTCG TGCTCAATCC 
    AACGGTGCTC AATTTATCAC TGGCCTTGTC ACGGATATTG AGGTGCCTGA TTTTTTATCT 
    TCAAAACCGT ATGTTATCCA CCACACTATT AATAATTGTA AACGATCATT AGCCGTTGAT 
    TTGATTGTCG GGGCTGATGG GGCTAATAGC AGGGTAGCGA AGATTATTAA TGCAGGGAAT 
    TACAGATGTG CCATTGCTTT TCAAGAGAGG ATCAAATTAC CGGATGAGAA AATGGAGTAT 
    TATCATAATC TCGCAGAAAT GTATGTTGGG AATGACGTGT CGCCTGACTT TTACGCGTGG 
    GTGTTTCCAA AATGCGACCA CGTGGCGGTG GGGACGGGCA CGGCGTGTGC GAGGCGGGAT 
    ATTAAGGTGT ATCAAAGAGG GATCAGGGAG AGGGTTAAGG AGAAGATTAA GGGTGGCAGA 
    GTGATTAAAG TGGAGGCTCA CCCAATCCCG GAGCAACCGC GTCCGAGGCG TGTGCGTGGA 
    CGTGTGGCGC TTGTTGGGGA CGCGGCGGGG TATGTGACCA AGTGTTCGGG AGAAGGAATA 
    TATTTCGCGG CGAAATCCGG TAGAATGTGC GGGGAGGCTA TTGTGAAGGC TTCAGAAGGG 
    GGGGAGAGGA TGGTCAGTGA GGAGGATTTG AAGAGGGAGT ACTTGAGAGA ATGGGATAAC 
    AAGTATGTGA ATACTTTCAG GTTCTTGGAT TTGTTGCAAA GAGTGTTTTA TGGGAGTAAT 
    GTGGGTAGAG AGGCATTGGT GGAGTTATGT GGGGATGAGT ATGTGCAGAG GATGACATTT 
    GATAGTTACT TGTACAAGAA GATGGCTAGT GGAGATAGAT GGGATGATGT GAAATTGGTT 
    TTGAATACTT TTGGGAGTTT TATGAGGTGT AAGGTTGTAG GAAGAGAGAT GGAGGCTTTG 
    AAGCTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312852.2
    CDS158..1246
    Translation

    Target ORF information:

    RefSeq Version XM_002312816.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0009s15940g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312816.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGATCGACG AGTTTTCCAT CCCTCTTCAC CTCATCGACC GACATGTCAC TCGCATGAAG 
    ATCATCTCTC CTTCGAACCT GACCGTTGAT TTCGGATCGA AAACATTAAA GTCTCATGAG 
    TTTATCCCCA TGTTGCGCCG CGAAGTACTG GATTCTTTTC TCCGGTCTCG TGCTCAATCC 
    AACGGTGCTC AATTTATCAC TGGCCTTGTC ACGGATATTG AGGTGCCTGA TTTTTTATCT 
    TCAAAACCGT ATGTTATCCA CCACACTATT AATAATTGTA AACGATCATT AGCCGTTGAT 
    TTGATTGTCG GGGCTGATGG GGCTAATAGC AGGGTAGCGA AGATTATTAA TGCAGGGAAT 
    TACAGATGTG CCATTGCTTT TCAAGAGAGG ATCAAATTAC CGGATGAGAA AATGGAGTAT 
    TATCATAATC TCGCAGAAAT GTATGTTGGG AATGACGTGT CGCCTGACTT TTACGCGTGG 
    GTGTTTCCAA AATGCGACCA CGTGGCGGTG GGGACGGGCA CGGCGTGTGC GAGGCGGGAT 
    ATTAAGGTGT ATCAAAGAGG GATCAGGGAG AGGGTTAAGG AGAAGATTAA GGGTGGCAGA 
    GTGATTAAAG TGGAGGCTCA CCCAATCCCG GAGCAACCGC GTCCGAGGCG TGTGCGTGGA 
    CGTGTGGCGC TTGTTGGGGA CGCGGCGGGG TATGTGACCA AGTGTTCGGG AGAAGGAATA 
    TATTTCGCGG CGAAATCCGG TAGAATGTGC GGGGAGGCTA TTGTGAAGGC TTCAGAAGGG 
    GGGGAGAGGA TGGTCAGTGA GGAGGATTTG AAGAGGGAGT ACTTGAGAGA ATGGGATAAC 
    AAGTATGTGA ATACTTTCAG GTTCTTGGAT TTGTTGCAAA GAGTGTTTTA TGGGAGTAAT 
    GTGGGTAGAG AGGCATTGGT GGAGTTATGT GGGGATGAGT ATGTGCAGAG GATGACATTT 
    GATAGTTACT TGTACAAGAA GATGGCTAGT GGAGATAGAT GGGATGATGT GAAATTGGTT 
    TTGAATACTT TTGGGAGTTT TATGAGGTGT AAGGTTGTAG GAAGAGAGAT GGAGGCTTTG 
    AAGCTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7460095 ( XM_002312816.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002312852.3 Populus trichocarpa geranylgeranyl diphosphate reductase, chloroplastic (LOC7460095), mRNA.
    Price & Availability↑
    CloneID OPa436030
    Clone ID Related Accession (Same CDS sequence) XM_002312816.3
    Accession Version XM_002312816.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1365bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product geranylgeranyl diphosphate reductase, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002312816.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGCCGCAC TAGCACTAAC CCACAACCTT CATTTCACTC CAACCCTACC TCTCAAAGCC 
    ATAAAACAAC ACCAGCAACC AAAACCCAAA ACTCTAACAA TCACCGCCAC CTCATCCAGC 
    CCCCTCTCTG GCCGCAAACT CCGCGCCGCT GTGATCGGCG GCGGCCCAGC AGGTTCATCC 
    GCCGCAGAAG CCTTAGCCGC CGGAGGAGTT GAAACCTTCC TCTTCGAGCG TAGCCCTTCC 
    ACAGCTAAGC CATGTGGTGG AGCCATCCCT CTTTGCATGA TCGACGAGTT TTCCATCCCT 
    CTTCACCTCA TCGACCGACA TGTCACTCGC ATGAAGATCA TCTCTCCTTC GAACCTGACC 
    GTTGATTTCG GATCGAAAAC ATTAAAGTCT CATGAGTTTA TCCCCATGTT GCGCCGCGAA 
    GTACTGGATT CTTTTCTCCG GTCTCGTGCT CAATCCAACG GTGCTCAATT TATCACTGGC 
    CTTGTCACGG ATATTGAGGT GCCTGATTTT TTATCTTCAA AACCGTATGT TATCCACCAC 
    ACTATTAATA ATTGTAAACG ATCATTAGCC GTTGATTTGA TTGTCGGGGC TGATGGGGCT 
    AATAGCAGGG TAGCGAAGAT TATTAATGCA GGGAATTACA GATGTGCCAT TGCTTTTCAA 
    GAGAGGATCA AATTACCGGA TGAGAAAATG GAGTATTATC ATAATCTCGC AGAAATGTAT 
    GTTGGGAATG ACGTGTCGCC TGACTTTTAC GCGTGGGTGT TTCCAAAATG CGACCACGTG 
    GCGGTGGGGA CGGGCACGGC GTGTGCGAGG CGGGATATTA AGGTGTATCA AAGAGGGATC 
    AGGGAGAGGG TTAAGGAGAA GATTAAGGGT GGCAGAGTGA TTAAAGTGGA GGCTCACCCA 
    ATCCCGGAGC AACCGCGTCC GAGGCGTGTG CGTGGACGTG TGGCGCTTGT TGGGGACGCG 
    GCGGGGTATG TGACCAAGTG TTCGGGAGAA GGAATATATT TCGCGGCGAA ATCCGGTAGA 
    ATGTGCGGGG AGGCTATTGT GAAGGCTTCA GAAGGGGGGG AGAGGATGGT CAGTGAGGAG 
    GATTTGAGGA GGGAGTACTT GAGAGAATGG GATAACAAGT ATGTGAATAC TTTCAGGTTC 
    TTGGATTTGT TGCAAAGAGT GTTTTATGGG AGTAATGTGG GTAGAGAGGC ATTGGTGGAG 
    TTATGTGGGG ATGAGTATGT GCAGAGGATG ACATTTGATA GTTACTTGTA CAAGAAGATG 
    GCTAGTGGAG ATAGATGGGA TGATGTGAAA TTGGTTTTGA ATACTTTTGG GAGTTTTATG 
    AGGTGTAAGG TTGTAGGAAG AGAGATGGAG GCTTTGAAGC TGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312852.3
    CDS156..1520
    Translation

    Target ORF information:

    RefSeq Version XM_002312816.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa geranylgeranyl diphosphate reductase, chloroplastic (LOC7460095), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312816.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGCCGCAC TAGCACTAAC CCACAACCTT CATTTCACTC CAACCCTACC TCTCAAAGCC 
    ATAAAACAAC ACCAGCAACC AAAACCCAAA ACTCTAACAA TCACCGCCAC CTCATCCAGC 
    CCCCTCTCTG GCCGCAAACT CCGCGCCGCT GTGATCGGCG GCGGCCCAGC AGGTTCATCC 
    GCCGCAGAAG CCTTAGCCGC CGGAGGAGTT GAAACCTTCC TCTTCGAGCG TAGCCCTTCC 
    ACAGCTAAGC CATGTGGTGG AGCCATCCCT CTTTGCATGA TCGACGAGTT TTCCATCCCT 
    CTTCACCTCA TCGACCGACA TGTCACTCGC ATGAAGATCA TCTCTCCTTC GAACCTGACC 
    GTTGATTTCG GATCGAAAAC ATTAAAGTCT CATGAGTTTA TCCCCATGTT GCGCCGCGAA 
    GTACTGGATT CTTTTCTCCG GTCTCGTGCT CAATCCAACG GTGCTCAATT TATCACTGGC 
    CTTGTCACGG ATATTGAGGT GCCTGATTTT TTATCTTCAA AACCGTATGT TATCCACCAC 
    ACTATTAATA ATTGTAAACG ATCATTAGCC GTTGATTTGA TTGTCGGGGC TGATGGGGCT 
    AATAGCAGGG TAGCGAAGAT TATTAATGCA GGGAATTACA GATGTGCCAT TGCTTTTCAA 
    GAGAGGATCA AATTACCGGA TGAGAAAATG GAGTATTATC ATAATCTCGC AGAAATGTAT 
    GTTGGGAATG ACGTGTCGCC TGACTTTTAC GCGTGGGTGT TTCCAAAATG CGACCACGTG 
    GCGGTGGGGA CGGGCACGGC GTGTGCGAGG CGGGATATTA AGGTGTATCA AAGAGGGATC 
    AGGGAGAGGG TTAAGGAGAA GATTAAGGGT GGCAGAGTGA TTAAAGTGGA GGCTCACCCA 
    ATCCCGGAGC AACCGCGTCC GAGGCGTGTG CGTGGACGTG TGGCGCTTGT TGGGGACGCG 
    GCGGGGTATG TGACCAAGTG TTCGGGAGAA GGAATATATT TCGCGGCGAA ATCCGGTAGA 
    ATGTGCGGGG AGGCTATTGT GAAGGCTTCA GAAGGGGGGG AGAGGATGGT CAGTGAGGAG 
    GATTTGAGGA GGGAGTACTT GAGAGAATGG GATAACAAGT ATGTGAATAC TTTCAGGTTC 
    TTGGATTTGT TGCAAAGAGT GTTTTATGGG AGTAATGTGG GTAGAGAGGC ATTGGTGGAG 
    TTATGTGGGG ATGAGTATGT GCAGAGGATG ACATTTGATA GTTACTTGTA CAAGAAGATG 
    GCTAGTGGAG ATAGATGGGA TGATGTGAAA TTGGTTTTGA ATACTTTTGG GAGTTTTATG 
    AGGTGTAAGG TTGTAGGAAG AGAGATGGAG GCTTTGAAGC TGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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