ORF » Species Summary » Populus trichocarpa » LOC7458772 cDNA ORF clone

LOC7458772 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7458772 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7458772 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa35318 XM_002324961.3
Latest version!		 Populus trichocarpa aspartate aminotransferase, cytoplasmic (LOC7458772), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa35318 XM_002324961.2 Populus trichocarpa aspartate aminotransferase family protein (POPTR_0018s08910g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7458772 ( XM_002324961.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002324997.1 Populus trichocarpa aspartate aminotransferase family protein (POPTR_0018s08910g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa35318
    Clone ID Related Accession (Same CDS sequence) XM_002324961.2 , XM_002324961.3
    Accession Version XM_002324961.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1224bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product aspartate aminotransferase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008484). On Dec 16, 2013 this sequence version replaced XM_002324961.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGAGTCTT CTTCTGTGTT TGCTAACATT GTCCGAGCTC CTGAAGATCC CATTCTCGGA 
    GTGACAGTTG CATATAACAA GGATAGCAGC CCACATAAGT TGAATTTGGG TGTTGGTGCT 
    TACCGAACCG AGGAAGGGAA GCCTCTGGTT TTGAATGTGG TGAGAAGAGC AGAGCAGATG 
    TTAGTGAATG ACAGCTCTCG GGTCAAAGAA TATCTTCCCA TTGTTGGACT TGCCGATTTT 
    AACAAATTGA GTGCCAAGCT TATTTTTGGT GCTGATAGTC CAGCCATACA AGAGAACAGA 
    GTGACTACTG TCCAGTGCTT GTCCGGTACT GGTTCTCTGA GGGTTGGGGC TGAGTTTCTT 
    GCTAGGCATT ACCACCAACT CGTGATTTAC ATCCCGAATC CCACGTGGGG AAATCATACC 
    AAAATCTTCG GTCTTGCAGG GCTGTCTGTG AAGGCTTACC GTTACTATGA TCCATCAACA 
    CGTGGGCTGG ATTTCCAAGG CTTGCTAGAG GATCTTGGAG CTGCACCATC AGGATCTATA 
    GTGCTTCTTC ATGCATGTGC TCATAACCCC ACTGGTGTTG ACCCAACCAT TGAACAATGG 
    GAGCAGATCA GACAGTTGAT GAGATCAAAA GGGCTGCTAC CATTCTTTGA CAGTGCTTAC 
    CAGGGTTTTG CTAGTGGTAG CCTAGATGCA GATGCAGGGT CTGTTCGCAT GTTCGTTGCA 
    GATGGCGGTG AATGTCTTGC AGCTCAGAGT TATGCAAAAA ACATGGGCCT CTATGGGGAA 
    CGTGTTGGTG CTCTCAGCAT AGTTTGCAAG AAAGCAGATG TTGCAAGTAG GGTTGAGAGC 
    CAGTTGAAGC TTGTGATACG GCCCATGTAT TCTAATCCAC CTATTCATGG TGCATCAATT 
    GTGGCCACCA TTCTCAAAGA CAGGGATATG TACAATGAAT GGACTGTTGA GCTGAAAGCA 
    ATGGCTGACC GGATTATAAG CATGCGCCAA CAACTATTTG ATGCTTTATC TGCTAGAGGC 
    ACTCCTGGTG ACTGGAGTCA CATTATCAAG CAAATTGGAA TGTTTACCTT CACTGGCTTG 
    AACACTGAAC AAGTTGCCTT CATGACCAAA GAGTATCACA TATACATGAC ATCTGATGGG 
    AGGATAAGCA TGGCAGGTCT TAGTTCCAGG ACAGTCCCTC ATCTGACAGA TGCCATACAT 
    GCTGCTGTTA CCCGTGTTGG CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002324997.1
    CDS121..1344
    Translation

    Target ORF information:

    RefSeq Version XM_002324961.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa aspartate aminotransferase family protein (POPTR_0018s08910g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002324961.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGAGTCTT CTTCTGTGTT TGCTAACATT GTCCGAGCTC CTGAAGATCC CATTCTCGGA 
    GTGACAGTTG CATATAACAA GGATAGCAGC CCACATAAGT TGAATTTGGG TGTTGGTGCT 
    TACCGAACCG AGGAAGGGAA GCCTCTGGTT TTGAATGTGG TGAGAAGAGC AGAGCAGATG 
    TTAGTGAATG ACAGCTCTCG GGTCAAAGAA TATCTTCCCA TTGTTGGACT TGCCGATTTT 
    AACAAATTGA GTGCCAAGCT TATTTTTGGT GCTGATAGTC CAGCCATACA AGAGAACAGA 
    GTGACTACTG TCCAGTGCTT GTCCGGTACT GGTTCTCTGA GGGTTGGGGC TGAGTTTCTT 
    GCTAGGCATT ACCACCAACT CGTGATTTAC ATCCCGAATC CCACGTGGGG AAATCATACC 
    AAAATCTTCG GTCTTGCAGG GCTGTCTGTG AAGGCTTACC GTTACTATGA TCCATCAACA 
    CGTGGGCTGG ATTTCCAAGG CTTGCTAGAG GATCTTGGAG CTGCACCATC AGGATCTATA 
    GTGCTTCTTC ATGCATGTGC TCATAACCCC ACTGGTGTTG ACCCAACCAT TGAACAATGG 
    GAGCAGATCA GACAGTTGAT GAGATCAAAA GGGCTGCTAC CATTCTTTGA CAGTGCTTAC 
    CAGGGTTTTG CTAGTGGTAG CCTAGATGCA GATGCAGGGT CTGTTCGCAT GTTCGTTGCA 
    GATGGCGGTG AATGTCTTGC AGCTCAGAGT TATGCAAAAA ACATGGGCCT CTATGGGGAA 
    CGTGTTGGTG CTCTCAGCAT AGTTTGCAAG AAAGCAGATG TTGCAAGTAG GGTTGAGAGC 
    CAGTTGAAGC TTGTGATACG GCCCATGTAT TCTAATCCAC CTATTCATGG TGCATCAATT 
    GTGGCCACCA TTCTCAAAGA CAGGGATATG TACAATGAAT GGACTGTTGA GCTGAAAGCA 
    ATGGCTGACC GGATTATAAG CATGCGCCAA CAACTATTTG ATGCTTTATC TGCTAGAGGC 
    ACTCCTGGTG ACTGGAGTCA CATTATCAAG CAAATTGGAA TGTTTACCTT CACTGGCTTG 
    AACACTGAAC AAGTTGCCTT CATGACCAAA GAGTATCACA TATACATGAC ATCTGATGGG 
    AGGATAAGCA TGGCAGGTCT TAGTTCCAGG ACAGTCCCTC ATCTGACAGA TGCCATACAT 
    GCTGCTGTTA CCCGTGTTGG CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7458772 ( XM_002324961.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002324997.1 Populus trichocarpa aspartate aminotransferase, cytoplasmic (LOC7458772), mRNA.
    Price & Availability↑
    CloneID OPa35318
    Clone ID Related Accession (Same CDS sequence) XM_002324961.2 , XM_002324961.3
    Accession Version XM_002324961.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1224bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product aspartate aminotransferase, cytoplasmic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037302.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002324961.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGAGTCTT CTTCTGTGTT TGCTAACATT GTCCGAGCTC CTGAAGATCC CATTCTCGGA 
    GTGACAGTTG CATATAACAA GGATAGCAGC CCACATAAGT TGAATTTGGG TGTTGGTGCT 
    TACCGAACCG AGGAAGGGAA GCCTCTGGTT TTGAATGTGG TGAGAAGAGC AGAGCAGATG 
    TTAGTGAATG ACAGCTCTCG GGTCAAAGAA TATCTTCCCA TTGTTGGACT TGCCGATTTT 
    AACAAATTGA GTGCCAAGCT TATTTTTGGT GCTGATAGTC CAGCCATACA AGAGAACAGA 
    GTGACTACTG TCCAGTGCTT GTCCGGTACT GGTTCTCTGA GGGTTGGGGC TGAGTTTCTT 
    GCTAGGCATT ACCACCAACT CGTGATTTAC ATCCCGAATC CCACGTGGGG AAATCATACC 
    AAAATCTTCG GTCTTGCAGG GCTGTCTGTG AAGGCTTACC GTTACTATGA TCCATCAACA 
    CGTGGGCTGG ATTTCCAAGG CTTGCTAGAG GATCTTGGAG CTGCACCATC AGGATCTATA 
    GTGCTTCTTC ATGCATGTGC TCATAACCCC ACTGGTGTTG ACCCAACCAT TGAACAATGG 
    GAGCAGATCA GACAGTTGAT GAGATCAAAA GGGCTGCTAC CATTCTTTGA CAGTGCTTAC 
    CAGGGTTTTG CTAGTGGTAG CCTAGATGCA GATGCAGGGT CTGTTCGCAT GTTCGTTGCA 
    GATGGCGGTG AATGTCTTGC AGCTCAGAGT TATGCAAAAA ACATGGGCCT CTATGGGGAA 
    CGTGTTGGTG CTCTCAGCAT AGTTTGCAAG AAAGCAGATG TTGCAAGTAG GGTTGAGAGC 
    CAGTTGAAGC TTGTGATACG GCCCATGTAT TCTAATCCAC CTATTCATGG TGCATCAATT 
    GTGGCCACCA TTCTCAAAGA CAGGGATATG TACAATGAAT GGACTGTTGA GCTGAAAGCA 
    ATGGCTGACC GGATTATAAG CATGCGCCAA CAACTATTTG ATGCTTTATC TGCTAGAGGC 
    ACTCCTGGTG ACTGGAGTCA CATTATCAAG CAAATTGGAA TGTTTACCTT CACTGGCTTG 
    AACACTGAAC AAGTTGCCTT CATGACCAAA GAGTATCACA TATACATGAC ATCTGATGGG 
    AGGATAAGCA TGGCAGGTCT TAGTTCCAGG ACAGTCCCTC ATCTGACAGA TGCCATACAT 
    GCTGCTGTTA CCCGTGTTGG CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002324997.1
    CDS130..1353
    Translation

    Target ORF information:

    RefSeq Version XM_002324961.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa aspartate aminotransferase, cytoplasmic (LOC7458772), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002324961.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGAGTCTT CTTCTGTGTT TGCTAACATT GTCCGAGCTC CTGAAGATCC CATTCTCGGA 
    GTGACAGTTG CATATAACAA GGATAGCAGC CCACATAAGT TGAATTTGGG TGTTGGTGCT 
    TACCGAACCG AGGAAGGGAA GCCTCTGGTT TTGAATGTGG TGAGAAGAGC AGAGCAGATG 
    TTAGTGAATG ACAGCTCTCG GGTCAAAGAA TATCTTCCCA TTGTTGGACT TGCCGATTTT 
    AACAAATTGA GTGCCAAGCT TATTTTTGGT GCTGATAGTC CAGCCATACA AGAGAACAGA 
    GTGACTACTG TCCAGTGCTT GTCCGGTACT GGTTCTCTGA GGGTTGGGGC TGAGTTTCTT 
    GCTAGGCATT ACCACCAACT CGTGATTTAC ATCCCGAATC CCACGTGGGG AAATCATACC 
    AAAATCTTCG GTCTTGCAGG GCTGTCTGTG AAGGCTTACC GTTACTATGA TCCATCAACA 
    CGTGGGCTGG ATTTCCAAGG CTTGCTAGAG GATCTTGGAG CTGCACCATC AGGATCTATA 
    GTGCTTCTTC ATGCATGTGC TCATAACCCC ACTGGTGTTG ACCCAACCAT TGAACAATGG 
    GAGCAGATCA GACAGTTGAT GAGATCAAAA GGGCTGCTAC CATTCTTTGA CAGTGCTTAC 
    CAGGGTTTTG CTAGTGGTAG CCTAGATGCA GATGCAGGGT CTGTTCGCAT GTTCGTTGCA 
    GATGGCGGTG AATGTCTTGC AGCTCAGAGT TATGCAAAAA ACATGGGCCT CTATGGGGAA 
    CGTGTTGGTG CTCTCAGCAT AGTTTGCAAG AAAGCAGATG TTGCAAGTAG GGTTGAGAGC 
    CAGTTGAAGC TTGTGATACG GCCCATGTAT TCTAATCCAC CTATTCATGG TGCATCAATT 
    GTGGCCACCA TTCTCAAAGA CAGGGATATG TACAATGAAT GGACTGTTGA GCTGAAAGCA 
    ATGGCTGACC GGATTATAAG CATGCGCCAA CAACTATTTG ATGCTTTATC TGCTAGAGGC 
    ACTCCTGGTG ACTGGAGTCA CATTATCAAG CAAATTGGAA TGTTTACCTT CACTGGCTTG 
    AACACTGAAC AAGTTGCCTT CATGACCAAA GAGTATCACA TATACATGAC ATCTGATGGG 
    AGGATAAGCA TGGCAGGTCT TAGTTCCAGG ACAGTCCCTC ATCTGACAGA TGCCATACAT 
    GCTGCTGTTA CCCGTGTTGG CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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