LOC18109653 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18109653 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18109653 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa24676 XM_006387875.1
Latest version!
Populus trichocarpa Peroxidase 5 precursor family protein (POPTR_0466s00200g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa419916 XM_024593428.1
Latest version!
Populus trichocarpa lignin-forming anionic peroxidase (LOC18109653), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa419917 XM_024593429.1
Latest version!
Populus trichocarpa lignin-forming anionic peroxidase (LOC18109653), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa24676
    Clone ID Related Accession (Same CDS sequence) XM_006387875.1
    Accession Version XM_006387875.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 954bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product Peroxidase 5 precursor family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_006255858). COMPLETENESS: incomplete on both ends.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAGTGA AAGTGGCAGC AGCTTTCATT TTTATGCTGT TTCTCTTGAG CACTACCGCA 
    TGCCAAGCAA AACTATCCTC TGCATTTTAC CACAAGTCGT GTCCTAAAGC AGAAAGTGCT
    ATCCGAACTG CCATCAGAAC TGCAATTGCG AGAGAACGGA GGATGGCGGC GTCTCTCATT
    CGTCTCCACT TTCATGATTG CTTCGTGCAG GGTTGTGATG CCTCAATTTT ATTAGACGAA
    ACTTCCTCTA TTCAGAGTGA AAAGACTGCA GGAGGCAATA ATAACTCTGT TAGAGGTTAT
    GAAGTCATAG ATAAAGCAAA ATCTAAAGTA GAGAAGATAT GTCCTGGAGT TGTATCTTGC
    GCGGATATCA TTGCTGTGGC AGCAAGAGAC GCATCTGCTT ATGTGGGTGG TCCATCTTGG
    GCAGTGAAGC TTGGAAGAAG AGATTCAACT ACAGCAAGTC CAGCTTTAGC CATCACAGAA
    CTACCTGCCT TCTTTGACGA CCTGGGGAGG CTTATTTCTC GCTTCCAGCA GAAAGGCCTT
    ACTGCAAGGG ACATGGTTGC ATTGTCAGGT TCTCATACGT TAGGACAAGC TCAATGCTTT
    ACATTCCGTG ACAGGATTTA CAATGCTAGC AATATCGATG CTGGATTCGC TAGCACTCGC
    AAGAGACGTT GTCCCCGTGC TGGTGGCCAG GCAAATTTGG CTCCGCTCGA TTTAGTCACA
    CCCAATTCTT TTGACAACAA TTACTTCAAG AATTTGATGC GAAACAAGGG CCTCCTTCAA
    TCAGATCAAG TTCTTTTCAA TGGAGGCTCC ACGGACAGCA TTGTCTCAGA ATACAGCAGG
    AATCCTGCGA AATTCAGCTC TGATTTTGCA TCTGCCATGA TCAAAATGGG AGACATCCGT
    CCACTCACTG GATCAGCCGG GCAGATAAGG AGGATTTGCA GTGCTGTCAA CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006387937.1
    CDS1..954
    Translation

    Target ORF information:

    RefSeq Version XM_006387875.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa Peroxidase 5 precursor family protein (POPTR_0466s00200g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006387875.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAGTGA AAGTGGCAGC AGCTTTCATT TTTATGCTGT TTCTCTTGAG CACTACCGCA 
    TGCCAAGCAA AACTATCCTC TGCATTTTAC CACAAGTCGT GTCCTAAAGC AGAAAGTGCT
    ATCCGAACTG CCATCAGAAC TGCAATTGCG AGAGAACGGA GGATGGCGGC GTCTCTCATT
    CGTCTCCACT TTCATGATTG CTTCGTGCAG GGTTGTGATG CCTCAATTTT ATTAGACGAA
    ACTTCCTCTA TTCAGAGTGA AAAGACTGCA GGAGGCAATA ATAACTCTGT TAGAGGTTAT
    GAAGTCATAG ATAAAGCAAA ATCTAAAGTA GAGAAGATAT GTCCTGGAGT TGTATCTTGC
    GCGGATATCA TTGCTGTGGC AGCAAGAGAC GCATCTGCTT ATGTGGGTGG TCCATCTTGG
    GCAGTGAAGC TTGGAAGAAG AGATTCAACT ACAGCAAGTC CAGCTTTAGC CATCACAGAA
    CTACCTGCCT TCTTTGACGA CCTGGGGAGG CTTATTTCTC GCTTCCAGCA GAAAGGCCTT
    ACTGCAAGGG ACATGGTTGC ATTGTCAGGT TCTCATACGT TAGGACAAGC TCAATGCTTT
    ACATTCCGTG ACAGGATTTA CAATGCTAGC AATATCGATG CTGGATTCGC TAGCACTCGC
    AAGAGACGTT GTCCCCGTGC TGGTGGCCAG GCAAATTTGG CTCCGCTCGA TTTAGTCACA
    CCCAATTCTT TTGACAACAA TTACTTCAAG AATTTGATGC GAAACAAGGG CCTCCTTCAA
    TCAGATCAAG TTCTTTTCAA TGGAGGCTCC ACGGACAGCA TTGTCTCAGA ATACAGCAGG
    AATCCTGCGA AATTCAGCTC TGATTTTGCA TCTGCCATGA TCAAAATGGG AGACATCCGT
    CCACTCACTG GATCAGCCGG GCAGATAAGG AGGATTTGCA GTGCTGTCAA CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa419916
    Clone ID Related Accession (Same CDS sequence) XM_024593428.1
    Accession Version XM_024593428.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 954bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product lignin-forming anionic peroxidase isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020168179.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAGTGA AAGTGGCAGC AGCTTTCATT TTTATGCTGT TTCTCTTGAG CACTACCGCA 
    TGCCAAGCAA AACTATCCTC TGCATTTTAC CACAAGTCGT GTCCTAAAGC AGAAAGTGCT
    ATCCGAACTG CCATCAGAAC TGCAATTGCG AGAGAACGGA GGATGGCGGC GTCTCTCATT
    CGTCTCCACT TTCATGATTG CTTCGTGCAG GGTTGTGATG CCTCAATTTT ATTAGACGAA
    ACTTCCTCTA TTCAGAGTGA AAAGACTGCA GGAGGCAATA ATAACTCTGT TAGAGGTTAT
    GAAGTCATAG ATAAAGCAAA ATCTAAAGTA GAGAAGATAT GTCCTGGAGT TGTATCTTGC
    GCGGATATCA TTGCTGTGGC AGCAAGAGAC GCATCTGCTT ATGTGGGTGG TCCATCTTGG
    GCAGTGAAGC TTGGAAGAAG AGATTCAACT ACAGCAAGTC CAGCTTTAGC CATCACAGAA
    CTACCTGCCT TCTTTGACGA CCTGGGGAGG CTTATTTCTC GCTTCCAGCA GAAAGGCCTT
    ACTGCAAGGG ACATGGTTGC ATTGTCAGGT TCTCATACGT TAGGACAAGC TCAATGCTTT
    ACATTCCGTG ACAGGATTTA CAATGCTAGC AATATCGATG CTGGATTCGC TAGCACTCGC
    AAGAGACGTT GTCCCCGTGC TGGTGGCCAG GCAAATTTGG CTCCGCTCGA TTTAGTCACA
    CCCAATTCTT TTGACAACAA TTACTTCAAG AATTTGATGC GAAACAAGGG CCTCCTTCAA
    TCAGATCAAG TTCTTTTCAA TGGAGGCTCC ACGGACAGCA TTGTCTCAGA ATACAGCAGG
    AATCCTGCGA AATTCAGCTC TGATTTTGCA TCTGCCATGA TCAAAATGGG AGACATCCGT
    CCACTCATTG GATCAGCCGG GCAGATAAGG AGGATTTGCA GTGCTGTCAA CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024449196.1
    CDS153..1106
    Translation

    Target ORF information:

    RefSeq Version XM_024593428.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa lignin-forming anionic peroxidase (LOC18109653), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024593428.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAGTGA AAGTGGCAGC AGCTTTCATT TTTATGCTGT TTCTCTTGAG CACTACCGCA 
    TGCCAAGCAA AACTATCCTC TGCATTTTAC CACAAGTCGT GTCCTAAAGC AGAAAGTGCT
    ATCCGAACTG CCATCAGAAC TGCAATTGCG AGAGAACGGA GGATGGCGGC GTCTCTCATT
    CGTCTCCACT TTCATGATTG CTTCGTGCAG GGTTGTGATG CCTCAATTTT ATTAGACGAA
    ACTTCCTCTA TTCAGAGTGA AAAGACTGCA GGAGGCAATA ATAACTCTGT TAGAGGTTAT
    GAAGTCATAG ATAAAGCAAA ATCTAAAGTA GAGAAGATAT GTCCTGGAGT TGTATCTTGC
    GCGGATATCA TTGCTGTGGC AGCAAGAGAC GCATCTGCTT ATGTGGGTGG TCCATCTTGG
    GCAGTGAAGC TTGGAAGAAG AGATTCAACT ACAGCAAGTC CAGCTTTAGC CATCACAGAA
    CTACCTGCCT TCTTTGACGA CCTGGGGAGG CTTATTTCTC GCTTCCAGCA GAAAGGCCTT
    ACTGCAAGGG ACATGGTTGC ATTGTCAGGT TCTCATACGT TAGGACAAGC TCAATGCTTT
    ACATTCCGTG ACAGGATTTA CAATGCTAGC AATATCGATG CTGGATTCGC TAGCACTCGC
    AAGAGACGTT GTCCCCGTGC TGGTGGCCAG GCAAATTTGG CTCCGCTCGA TTTAGTCACA
    CCCAATTCTT TTGACAACAA TTACTTCAAG AATTTGATGC GAAACAAGGG CCTCCTTCAA
    TCAGATCAAG TTCTTTTCAA TGGAGGCTCC ACGGACAGCA TTGTCTCAGA ATACAGCAGG
    AATCCTGCGA AATTCAGCTC TGATTTTGCA TCTGCCATGA TCAAAATGGG AGACATCCGT
    CCACTCATTG GATCAGCCGG GCAGATAAGG AGGATTTGCA GTGCTGTCAA CTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa419917
    Clone ID Related Accession (Same CDS sequence) XM_024593429.1
    Accession Version XM_024593429.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 951bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product lignin-forming anionic peroxidase isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020168179.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAGTGA AAGTGGCAGC AGCTTTCATT TTTATGCTGT TTTTCTTGAC CACAGCATGC 
    CAAGCAAAGC TCTCCTCTAC ATTTTACCAC AAGTCGTGTC CTAATGCAGA AAGTGCTATC
    CGAACTGCCA TCAGAACTGC AATTGCGAGA GAACGGAGGA TGGCGGCGTC TCTCATTCGC
    CTGCACTTTC ATGATTGCTT CGTGCAGGGC TGTGATGCCT CGATCTTGCT AGACGAAACT
    TCCTCTATCA AGAGTGAAAA GACTGCAGGA GCCAACAAGA ACTCTGCCAG AGGCTATGAA
    GTCATAGATA AAGCAAAAGC TGAAGTAGAG AAGATATGTC CTGGAGTGGT ATCTTGCGCG
    GATATCATTG CTGTGGCAGC AAGAGACGCA TCTGCTTATG TGGGTGGTCC ATCTTGGGCA
    GTGAAGCTTG GAAGAAGAGA TTCAACTACA GCAAGTCCAA CTTTAGCCAT CACAGAACTA
    CCTGCCTTCT CTGACGACCT GGGGAGGCTT ATTTCTCGCT TCCAGCAGAA AGGCCTCACT
    GCAAGGGACA TGGTTGCTTT GTCAGGTTCG CATAGTCTAG GACAGGCTCA ATGCTTTACA
    TTCCGTGATA GGATACACAG TGACAATAAT ATCGATGCTG GGTTCGCTAG CACTCGCAAG
    AGGCGTTGTC CCCGTGCTGG TGGCCAGGCA AATTTGGCTC CGCTCGATTT AGTCACACCC
    AATTCTTTTG ACAACAATTA CTTCAAGAAT TTGATGCGAA ACAAGGGCCT CCTTCAATCA
    GATCAAGTTC TTTTCAATGG AGGCTCCACG GACAGCATTG TCTCAGAATA CAGCAGGAAT
    CCTGCGAAAT TCAGCTCTGA TTTTGCATCT GCCATGATCA AAATGGGAGA CATCCGTCCA
    CTCATTGGAT CAGCCGGGCA GATAAGGAGG ATTTGCAGTG CTGTCAACTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024449197.1
    CDS147..1097
    Translation

    Target ORF information:

    RefSeq Version XM_024593429.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa lignin-forming anionic peroxidase (LOC18109653), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024593429.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCAGTGA AAGTGGCAGC AGCTTTCATT TTTATGCTGT TTTTCTTGAC CACAGCATGC 
    CAAGCAAAGC TCTCCTCTAC ATTTTACCAC AAGTCGTGTC CTAATGCAGA AAGTGCTATC
    CGAACTGCCA TCAGAACTGC AATTGCGAGA GAACGGAGGA TGGCGGCGTC TCTCATTCGC
    CTGCACTTTC ATGATTGCTT CGTGCAGGGC TGTGATGCCT CGATCTTGCT AGACGAAACT
    TCCTCTATCA AGAGTGAAAA GACTGCAGGA GCCAACAAGA ACTCTGCCAG AGGCTATGAA
    GTCATAGATA AAGCAAAAGC TGAAGTAGAG AAGATATGTC CTGGAGTGGT ATCTTGCGCG
    GATATCATTG CTGTGGCAGC AAGAGACGCA TCTGCTTATG TGGGTGGTCC ATCTTGGGCA
    GTGAAGCTTG GAAGAAGAGA TTCAACTACA GCAAGTCCAA CTTTAGCCAT CACAGAACTA
    CCTGCCTTCT CTGACGACCT GGGGAGGCTT ATTTCTCGCT TCCAGCAGAA AGGCCTCACT
    GCAAGGGACA TGGTTGCTTT GTCAGGTTCG CATAGTCTAG GACAGGCTCA ATGCTTTACA
    TTCCGTGATA GGATACACAG TGACAATAAT ATCGATGCTG GGTTCGCTAG CACTCGCAAG
    AGGCGTTGTC CCCGTGCTGG TGGCCAGGCA AATTTGGCTC CGCTCGATTT AGTCACACCC
    AATTCTTTTG ACAACAATTA CTTCAAGAAT TTGATGCGAA ACAAGGGCCT CCTTCAATCA
    GATCAAGTTC TTTTCAATGG AGGCTCCACG GACAGCATTG TCTCAGAATA CAGCAGGAAT
    CCTGCGAAAT TCAGCTCTGA TTTTGCATCT GCCATGATCA AAATGGGAGA CATCCGTCCA
    CTCATTGGAT CAGCCGGGCA GATAAGGAGG ATTTGCAGTG CTGTCAACTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D