ORF » Species Summary » Populus trichocarpa » LOC18105660 cDNA ORF clone

LOC18105660 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18105660 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18105660 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

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OPa32163 XM_006374250.2
Latest version!		 Populus trichocarpa probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 (LOC18105660), mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00
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OPa32163 XM_006374250.1 Populus trichocarpa ATP-dependent RNA helicase family protein (POPTR_0015s05960g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18105660 ( XM_006374250.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006374312.1 Populus trichocarpa ATP-dependent RNA helicase family protein (POPTR_0015s05960g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa32163
    Clone ID Related Accession (Same CDS sequence) XM_006374250.1 , XM_006374250.2
    Accession Version XM_006374250.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3534bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product ATP-dependent RNA helicase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008481). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    ATGGCAACCG CAGCAGAAAA CGACGCCGGA TTGAAGAAGC TCGAGTACCT CTCCCTCGTC 
    TCCAAGGTCT GCAGCGAACT CGAAACTCAC TTGGGGTTTG GAGATAAGAT CTTAGCTGAG 
    TTCATCACCG AGTTAGGTCG GAGTTGCGAA ACAGTAGATG AGTTCGATGC GAAGCTGAAG 
    GAAAATGGAG CTGAAATGCC TGATTACTTT GTTCGGACAT TGCTGACGAT TATTCACGCG 
    ATTTTGCCGC CGAAAGCGGA GAAGGAGGGG AAGAAAGATA AGGAGAATGA TGGGTCAGGT 
    AAAGATTCTA AATTTAAAGC TCTCTCGATT AAAGATAGTA GAGACAGAGT GAAAGAAATT 
    GATAGGGAAT TGGAAATTGA AGCTGAAGAG AAAAGTAGAA GAGAGAATGA AGACAGGCAC 
    AGAGAAAGAG ATAACGATGA CAGACATATA GAGAGAGATA GGAGAGGGAG AGATAGGGAT 
    AGAGAGAGGG ATAGGGATAG GGATACAGAT AGAGAGAGAG AAAGAGATAT GTATGATAGA 
    GATGATAGGA GGAGAGATAG AGGAAGAAGG AGAGATGGAC ATGATATAGA GGATGGTGAA 
    GGTGAGAGGG AGAGAAGGAA TGGGAAACAT GGGTATGGTG GTGGTAATAG TAATGAGCCG 
    GAATTGTATG GGGTTTATAA GGGGAGGGTG TCGAGGGTGA TGGATACAGG TTGTTTTGTC 
    GAGTTGAGTG ATTTTAAGGG GAAGGAGGGT TTGGTTCATG TTTCGCAGAT TGCAACCAGG 
    AGAGTTGGGA ATGCAAAGGA CGTGGTTAAG AGGGACCAGG AAGTTTATGT TAAGGTGATT 
    TCAGTGTCGG GGAACAAGTT GAGTCTTTCG ATGAGGGATG TTGATCAGAA TAGTGGGAAA 
    GATTTGCTTC CATTGAAGAA GAGGGATGAT GAGGAGGATG GTTTTAGGAG CAATGCTTTG 
    GGTTTGTCTA AGGAGGGGCC GGTGACGAGG ACAGGGTTGT CAGGGATTAG GATTGTGGAG 
    GAGGAGGATA CTGGTCCGTC ACGGAGACCT TTAAAGAGAA TGAGCTCGCC AGAGAAGTGG 
    GAAGCAAAAC AGTTGATTGC TTCGGGGGTT TTGAGTGTGC AAGAGTACCC CATGTATGAT 
    GAGGAAATAG ATGGGTTGCT TTATCAAGAA GAGGGAGTTG AGGAAGAGCT TGAGATTGAG 
    ATGAATGAGG ATGAGCCTGC ATTTTTGCAA GGGCAGACTA GGTATTCTGT TGATATGTCA 
    CCAGTTAAGA TTTTTAAGAA TCCTGAAGGT TCGTTGAGTC GTGCAGCTGC TCTTCAGTCT 
    GCACTTATAA AGGAGAGGAG AGAAGTGAGG GAGCAGCAGC AGAGGACTAT GCTTGATTCA 
    ATACCAAAGG ATCTTAATCG TCCTTGGGAA GACCCAATGC CCGAGACTGG CGAGAGGCAT 
    CTTGCCCAGG AGCTGCGTGG TGTTGGCTTA TCTGCTTATG ACATGCCTGA ATGGAAGAAG 
    GATGCATTTG GGAAAGCACT GACATATGGG CAGCGATCCA AGTTATCTAT CCAGGAACAG 
    AGGCAGAGCT TGCCAATTTA CAAATTGAAA AAAGAGTTAA TTCAGGCTGT CCATGACAAT 
    CAGGTTCTGG TGGTTATTGG TGAGACAGGT TCAGGTAAGA CTACTCAGGT GACACAGTAT 
    CTTGCTGAGG CAGGTTATAC CACTAGGGGT AAGATTGGAT GTACTCAGCC TCGTAGGGTG 
    GCTGCTATGT CTGTAGCCAA GAGGGTGGCT GAAGAGTTTG GCTGTCGTTT AGGTGAGGAA 
    GTTGGCTATG CTATTCGTTT TGAGGATTGC ACTGGACCAG ATACTGTGAT CAAGTATATG 
    ACAGATGGTA TGCTGCTTAG GGAGATTCTG ATTGATGAGA ACCTTTCTCA GTACTCGGTG 
    ATAATGCTAG ATGAAGCTCA TGAGAGGACC ATTCACACTG ATGTCCTTTT CGGGTTGCTC 
    AAGAAACTTG TGAAGAGAAG ACCTGATCTT CGCTTGATTG TCACATCAGC CACACTGGAT 
    GCGGAGAAAT TTTCAGGGTA TTTCTTCAAC TGTAACATAT TCACGATTCC TGGGAGAACA 
    TTTCCTGTGG AGATATTGTA CACCAAACAG CCAGAAAGTG ACTACTTAGA TGCATCTCTG 
    ATTACTGTCT TGCAAATCCA CTTGACAGAA CCTGAAGGTG ACATACTTCT ATTCTTGACA 
    GGCCAGGAGG AGATTGATTT TGCATGTCAA TCTCTTTATG AGAGGATGAA AGGATTAGGA 
    AAAAATGTTC CTGAATTGAT CATTTTGCCT GTTTATAGTG CTCTTCCTAG TGAAATGCAG 
    TCAAGAATCT TTGATCCTGC CCCACCTGGA AAGAGGAAGG TGGTTGTGGC AACTAATATT 
    GCCGAAGCCT CTTTGACAAT TGATGGAATT TTTTATGTTA TTGATCCTGG GTTTGCCAAG 
    CAGAACGTGT ATAATCCAAA GCAAGGGCTT GATTCTCTAG TTATAACGCC AATTTCACAA 
    GCATCTGCCA AGCAACGAGC TGGACGTGCT GGGCGTACTG GGCCTGGAAA ATGTTATCGT 
    CTCTACACAG AAAGTGCATA CCGCAATGAG ATGTCTCCCA CCTCAATTCC AGAAATCCAA 
    AGAATTAATC TTGGATTCAC TACGCTTACA ATGAAGGCTA TGGGAATTAA TGACCTATTG 
    TCTTTTGATT TTATGGATCC ACCTTCACCG CAGGCCCTGA TTTCTGCCAT GGAACAGCTA 
    TACAGCCTTG GAGCTCTGGA TGAGGAAGGA CTTCTTACCA AACTAGGGAG GAAAATGGCA 
    GAATTTCCTC TGGATCCACC ATTGTCTAAA ATGTTGCTGG CTAGTGTAGA CCTCGGGTGC 
    AGTGATGAGA TTTTGACTAT GATTGCCATG ATCCAAACTG GTAACATCTT TTACAGACCT 
    AGAGAAAAAC AAGCTCAGGC TGATCAGAAG AGGGCCAAGT TTTTCCAGCC TGAGGGAGAC 
    CATCTGACTT TGCTTGCTGT GTACGAGGCT TGGAAAGCCA AGAACTTTTC AGGACCTTGG 
    TGTTTTGAGA ACTTTGTCCA ATCCCGATCC TTGAGGAGAG CACAGGATGT CAGAAAACAG 
    CTTCTAAGCA TCATGGACAA GTATAAACTA GATGTTGTTA GTGCTGGGAA GAATTTTACC 
    AAGATAAGGA AAGCGATTAC AGCTGGATTC TTTTTCCATG CAGCTAGAAA GGACCCACAG 
    GAGGGTTATC GGACTTTGGT TGAGAACCAG CCAGTTTATA TCCACCCCAG CAGTGCTCTT 
    TTCCAGAGAC AACCAGACTG GGTCATCTAC CATGAGCTGG TAATGACTAC AAAAGAGTAT 
    ATGCGTGAGG TCACGGTTAT AGATCCCAAG TGGCTTGTGG AACTAGCTCC CAGGTTCTTT 
    AAAGTATCAG ATCCTACAAA AATGAGCAAG CGAAAGCGTC AAGAACGCAT TGAACCTCTC 
    TACGATAGAT ACCACGAACC TAATTCGTGG CGTTTGAGTA AAAGGCGAGC ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006374312.1
    CDS93..3626
    Translation

    Target ORF information:

    RefSeq Version XM_006374250.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa ATP-dependent RNA helicase family protein (POPTR_0015s05960g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006374250.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    ATGGCAACCG CAGCAGAAAA CGACGCCGGA TTGAAGAAGC TCGAGTACCT CTCCCTCGTC 
    TCCAAGGTCT GCAGCGAACT CGAAACTCAC TTGGGGTTTG GAGATAAGAT CTTAGCTGAG 
    TTCATCACCG AGTTAGGTCG GAGTTGCGAA ACAGTAGATG AGTTCGATGC GAAGCTGAAG 
    GAAAATGGAG CTGAAATGCC TGATTACTTT GTTCGGACAT TGCTGACGAT TATTCACGCG 
    ATTTTGCCGC CGAAAGCGGA GAAGGAGGGG AAGAAAGATA AGGAGAATGA TGGGTCAGGT 
    AAAGATTCTA AATTTAAAGC TCTCTCGATT AAAGATAGTA GAGACAGAGT GAAAGAAATT 
    GATAGGGAAT TGGAAATTGA AGCTGAAGAG AAAAGTAGAA GAGAGAATGA AGACAGGCAC 
    AGAGAAAGAG ATAACGATGA CAGACATATA GAGAGAGATA GGAGAGGGAG AGATAGGGAT 
    AGAGAGAGGG ATAGGGATAG GGATACAGAT AGAGAGAGAG AAAGAGATAT GTATGATAGA 
    GATGATAGGA GGAGAGATAG AGGAAGAAGG AGAGATGGAC ATGATATAGA GGATGGTGAA 
    GGTGAGAGGG AGAGAAGGAA TGGGAAACAT GGGTATGGTG GTGGTAATAG TAATGAGCCG 
    GAATTGTATG GGGTTTATAA GGGGAGGGTG TCGAGGGTGA TGGATACAGG TTGTTTTGTC 
    GAGTTGAGTG ATTTTAAGGG GAAGGAGGGT TTGGTTCATG TTTCGCAGAT TGCAACCAGG 
    AGAGTTGGGA ATGCAAAGGA CGTGGTTAAG AGGGACCAGG AAGTTTATGT TAAGGTGATT 
    TCAGTGTCGG GGAACAAGTT GAGTCTTTCG ATGAGGGATG TTGATCAGAA TAGTGGGAAA 
    GATTTGCTTC CATTGAAGAA GAGGGATGAT GAGGAGGATG GTTTTAGGAG CAATGCTTTG 
    GGTTTGTCTA AGGAGGGGCC GGTGACGAGG ACAGGGTTGT CAGGGATTAG GATTGTGGAG 
    GAGGAGGATA CTGGTCCGTC ACGGAGACCT TTAAAGAGAA TGAGCTCGCC AGAGAAGTGG 
    GAAGCAAAAC AGTTGATTGC TTCGGGGGTT TTGAGTGTGC AAGAGTACCC CATGTATGAT 
    GAGGAAATAG ATGGGTTGCT TTATCAAGAA GAGGGAGTTG AGGAAGAGCT TGAGATTGAG 
    ATGAATGAGG ATGAGCCTGC ATTTTTGCAA GGGCAGACTA GGTATTCTGT TGATATGTCA 
    CCAGTTAAGA TTTTTAAGAA TCCTGAAGGT TCGTTGAGTC GTGCAGCTGC TCTTCAGTCT 
    GCACTTATAA AGGAGAGGAG AGAAGTGAGG GAGCAGCAGC AGAGGACTAT GCTTGATTCA 
    ATACCAAAGG ATCTTAATCG TCCTTGGGAA GACCCAATGC CCGAGACTGG CGAGAGGCAT 
    CTTGCCCAGG AGCTGCGTGG TGTTGGCTTA TCTGCTTATG ACATGCCTGA ATGGAAGAAG 
    GATGCATTTG GGAAAGCACT GACATATGGG CAGCGATCCA AGTTATCTAT CCAGGAACAG 
    AGGCAGAGCT TGCCAATTTA CAAATTGAAA AAAGAGTTAA TTCAGGCTGT CCATGACAAT 
    CAGGTTCTGG TGGTTATTGG TGAGACAGGT TCAGGTAAGA CTACTCAGGT GACACAGTAT 
    CTTGCTGAGG CAGGTTATAC CACTAGGGGT AAGATTGGAT GTACTCAGCC TCGTAGGGTG 
    GCTGCTATGT CTGTAGCCAA GAGGGTGGCT GAAGAGTTTG GCTGTCGTTT AGGTGAGGAA 
    GTTGGCTATG CTATTCGTTT TGAGGATTGC ACTGGACCAG ATACTGTGAT CAAGTATATG 
    ACAGATGGTA TGCTGCTTAG GGAGATTCTG ATTGATGAGA ACCTTTCTCA GTACTCGGTG 
    ATAATGCTAG ATGAAGCTCA TGAGAGGACC ATTCACACTG ATGTCCTTTT CGGGTTGCTC 
    AAGAAACTTG TGAAGAGAAG ACCTGATCTT CGCTTGATTG TCACATCAGC CACACTGGAT 
    GCGGAGAAAT TTTCAGGGTA TTTCTTCAAC TGTAACATAT TCACGATTCC TGGGAGAACA 
    TTTCCTGTGG AGATATTGTA CACCAAACAG CCAGAAAGTG ACTACTTAGA TGCATCTCTG 
    ATTACTGTCT TGCAAATCCA CTTGACAGAA CCTGAAGGTG ACATACTTCT ATTCTTGACA 
    GGCCAGGAGG AGATTGATTT TGCATGTCAA TCTCTTTATG AGAGGATGAA AGGATTAGGA 
    AAAAATGTTC CTGAATTGAT CATTTTGCCT GTTTATAGTG CTCTTCCTAG TGAAATGCAG 
    TCAAGAATCT TTGATCCTGC CCCACCTGGA AAGAGGAAGG TGGTTGTGGC AACTAATATT 
    GCCGAAGCCT CTTTGACAAT TGATGGAATT TTTTATGTTA TTGATCCTGG GTTTGCCAAG 
    CAGAACGTGT ATAATCCAAA GCAAGGGCTT GATTCTCTAG TTATAACGCC AATTTCACAA 
    GCATCTGCCA AGCAACGAGC TGGACGTGCT GGGCGTACTG GGCCTGGAAA ATGTTATCGT 
    CTCTACACAG AAAGTGCATA CCGCAATGAG ATGTCTCCCA CCTCAATTCC AGAAATCCAA 
    AGAATTAATC TTGGATTCAC TACGCTTACA ATGAAGGCTA TGGGAATTAA TGACCTATTG 
    TCTTTTGATT TTATGGATCC ACCTTCACCG CAGGCCCTGA TTTCTGCCAT GGAACAGCTA 
    TACAGCCTTG GAGCTCTGGA TGAGGAAGGA CTTCTTACCA AACTAGGGAG GAAAATGGCA 
    GAATTTCCTC TGGATCCACC ATTGTCTAAA ATGTTGCTGG CTAGTGTAGA CCTCGGGTGC 
    AGTGATGAGA TTTTGACTAT GATTGCCATG ATCCAAACTG GTAACATCTT TTACAGACCT 
    AGAGAAAAAC AAGCTCAGGC TGATCAGAAG AGGGCCAAGT TTTTCCAGCC TGAGGGAGAC 
    CATCTGACTT TGCTTGCTGT GTACGAGGCT TGGAAAGCCA AGAACTTTTC AGGACCTTGG 
    TGTTTTGAGA ACTTTGTCCA ATCCCGATCC TTGAGGAGAG CACAGGATGT CAGAAAACAG 
    CTTCTAAGCA TCATGGACAA GTATAAACTA GATGTTGTTA GTGCTGGGAA GAATTTTACC 
    AAGATAAGGA AAGCGATTAC AGCTGGATTC TTTTTCCATG CAGCTAGAAA GGACCCACAG 
    GAGGGTTATC GGACTTTGGT TGAGAACCAG CCAGTTTATA TCCACCCCAG CAGTGCTCTT 
    TTCCAGAGAC AACCAGACTG GGTCATCTAC CATGAGCTGG TAATGACTAC AAAAGAGTAT 
    ATGCGTGAGG TCACGGTTAT AGATCCCAAG TGGCTTGTGG AACTAGCTCC CAGGTTCTTT 
    AAAGTATCAG ATCCTACAAA AATGAGCAAG CGAAAGCGTC AAGAACGCAT TGAACCTCTC 
    TACGATAGAT ACCACGAACC TAATTCGTGG CGTTTGAGTA AAAGGCGAGC ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18105660 ( XM_006374250.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006374312.1 Populus trichocarpa probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 (LOC18105660), mRNA.
    Price & Availability↑
    CloneID OPa32163
    Clone ID Related Accession (Same CDS sequence) XM_006374250.1 , XM_006374250.2
    Accession Version XM_006374250.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3534bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037299.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006374250.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    ATGGCAACCG CAGCAGAAAA CGACGCCGGA TTGAAGAAGC TCGAGTACCT CTCCCTCGTC 
    TCCAAGGTCT GCAGCGAACT CGAAACTCAC TTGGGGTTTG GAGATAAGAT CTTAGCTGAG 
    TTCATCACCG AGTTAGGTCG GAGTTGCGAA ACAGTAGATG AGTTCGATGC GAAGCTGAAG 
    GAAAATGGAG CTGAAATGCC TGATTACTTT GTTCGGACAT TGCTGACGAT TATTCACGCG 
    ATTTTGCCGC CGAAAGCGGA GAAGGAGGGG AAGAAAGATA AGGAGAATGA TGGGTCAGGT 
    AAAGATTCTA AATTTAAAGC TCTCTCGATT AAAGATAGTA GAGACAGAGT GAAAGAAATT 
    GATAGGGAAT TGGAAATTGA AGCTGAAGAG AAAAGTAGAA GAGAGAATGA AGACAGGCAC 
    AGAGAAAGAG ATAACGATGA CAGACATATA GAGAGAGATA GGAGAGGGAG AGATAGGGAT 
    AGAGAGAGGG ATAGGGATAG GGATACAGAT AGAGAGAGAG AAAGAGATAT GTATGATAGA 
    GATGATAGGA GGAGAGATAG AGGAAGAAGG AGAGATGGAC ATGATATAGA GGATGGTGAA 
    GGTGAGAGGG AGAGAAGGAA TGGGAAACAT GGGTATGGTG GTGGTAATAG TAATGAGCCG 
    GAATTGTATG GGGTTTATAA GGGGAGGGTG TCGAGGGTGA TGGATACAGG TTGTTTTGTC 
    GAGTTGAGTG ATTTTAAGGG GAAGGAGGGT TTGGTTCATG TTTCGCAGAT TGCAACCAGG 
    AGAGTTGGGA ATGCAAAGGA CGTGGTTAAG AGGGACCAGG AAGTTTATGT TAAGGTGATT 
    TCAGTGTCGG GGAACAAGTT GAGTCTTTCG ATGAGGGATG TTGATCAGAA TAGTGGGAAA 
    GATTTGCTTC CATTGAAGAA GAGGGATGAT GAGGAGGATG GTTTTAGGAG CAATGCTTTG 
    GGTTTGTCTA AGGAGGGGCC GGTGACGAGG ACAGGGTTGT CAGGGATTAG GATTGTGGAG 
    GAGGAGGATA CTGGTCCGTC ACGGAGACCT TTAAAGAGAA TGAGCTCGCC AGAGAAGTGG 
    GAAGCAAAAC AGTTGATTGC TTCGGGGGTT TTGAGTGTGC AAGAGTACCC CATGTATGAT 
    GAGGAAATAG ATGGGTTGCT TTATCAAGAA GAGGGAGTTG AGGAAGAGCT TGAGATTGAG 
    ATGAATGAGG ATGAGCCTGC ATTTTTGCAA GGGCAGACTA GGTATTCTGT TGATATGTCA 
    CCAGTTAAGA TTTTTAAGAA TCCTGAAGGT TCGTTGAGTC GTGCAGCTGC TCTTCAGTCT 
    GCACTTATAA AGGAGAGGAG AGAAGTGAGG GAGCAGCAGC AGAGGACTAT GCTTGATTCA 
    ATACCAAAGG ATCTTAATCG TCCTTGGGAA GACCCAATGC CCGAGACTGG CGAGAGGCAT 
    CTTGCCCAGG AGCTGCGTGG TGTTGGCTTA TCTGCTTATG ACATGCCTGA ATGGAAGAAG 
    GATGCATTTG GGAAAGCACT GACATATGGG CAGCGATCCA AGTTATCTAT CCAGGAACAG 
    AGGCAGAGCT TGCCAATTTA CAAATTGAAA AAAGAGTTAA TTCAGGCTGT CCATGACAAT 
    CAGGTTCTGG TGGTTATTGG TGAGACAGGT TCAGGTAAGA CTACTCAGGT GACACAGTAT 
    CTTGCTGAGG CAGGTTATAC CACTAGGGGT AAGATTGGAT GTACTCAGCC TCGTAGGGTG 
    GCTGCTATGT CTGTAGCCAA GAGGGTGGCT GAAGAGTTTG GCTGTCGTTT AGGTGAGGAA 
    GTTGGCTATG CTATTCGTTT TGAGGATTGC ACTGGACCAG ATACTGTGAT CAAGTATATG 
    ACAGATGGTA TGCTGCTTAG GGAGATTCTG ATTGATGAGA ACCTTTCTCA GTACTCGGTG 
    ATAATGCTAG ATGAAGCTCA TGAGAGGACC ATTCACACTG ATGTCCTTTT CGGGTTGCTC 
    AAGAAACTTG TGAAGAGAAG ACCTGATCTT CGCTTGATTG TCACATCAGC CACACTGGAT 
    GCGGAGAAAT TTTCAGGGTA TTTCTTCAAC TGTAACATAT TCACGATTCC TGGGAGAACA 
    TTTCCTGTGG AGATATTGTA CACCAAACAG CCAGAAAGTG ACTACTTAGA TGCATCTCTG 
    ATTACTGTCT TGCAAATCCA CTTGACAGAA CCTGAAGGTG ACATACTTCT ATTCTTGACA 
    GGCCAGGAGG AGATTGATTT TGCATGTCAA TCTCTTTATG AGAGGATGAA AGGATTAGGA 
    AAAAATGTTC CTGAATTGAT CATTTTGCCT GTTTATAGTG CTCTTCCTAG TGAAATGCAG 
    TCAAGAATCT TTGATCCTGC CCCACCTGGA AAGAGGAAGG TGGTTGTGGC AACTAATATT 
    GCCGAAGCCT CTTTGACAAT TGATGGAATT TTTTATGTTA TTGATCCTGG GTTTGCCAAG 
    CAGAACGTGT ATAATCCAAA GCAAGGGCTT GATTCTCTAG TTATAACGCC AATTTCACAA 
    GCATCTGCCA AGCAACGAGC TGGACGTGCT GGGCGTACTG GGCCTGGAAA ATGTTATCGT 
    CTCTACACAG AAAGTGCATA CCGCAATGAG ATGTCTCCCA CCTCAATTCC AGAAATCCAA 
    AGAATTAATC TTGGATTCAC TACGCTTACA ATGAAGGCTA TGGGAATTAA TGACCTATTG 
    TCTTTTGATT TTATGGATCC ACCTTCACCG CAGGCCCTGA TTTCTGCCAT GGAACAGCTA 
    TACAGCCTTG GAGCTCTGGA TGAGGAAGGA CTTCTTACCA AACTAGGGAG GAAAATGGCA 
    GAATTTCCTC TGGATCCACC ATTGTCTAAA ATGTTGCTGG CTAGTGTAGA CCTCGGGTGC 
    AGTGATGAGA TTTTGACTAT GATTGCCATG ATCCAAACTG GTAACATCTT TTACAGACCT 
    AGAGAAAAAC AAGCTCAGGC TGATCAGAAG AGGGCCAAGT TTTTCCAGCC TGAGGGAGAC 
    CATCTGACTT TGCTTGCTGT GTACGAGGCT TGGAAAGCCA AGAACTTTTC AGGACCTTGG 
    TGTTTTGAGA ACTTTGTCCA ATCCCGATCC TTGAGGAGAG CACAGGATGT CAGAAAACAG 
    CTTCTAAGCA TCATGGACAA GTATAAACTA GATGTTGTTA GTGCTGGGAA GAATTTTACC 
    AAGATAAGGA AAGCGATTAC AGCTGGATTC TTTTTCCATG CAGCTAGAAA GGACCCACAG 
    GAGGGTTATC GGACTTTGGT TGAGAACCAG CCAGTTTATA TCCACCCCAG CAGTGCTCTT 
    TTCCAGAGAC AACCAGACTG GGTCATCTAC CATGAGCTGG TAATGACTAC AAAAGAGTAT 
    ATGCGTGAGG TCACGGTTAT AGATCCCAAG TGGCTTGTGG AACTAGCTCC CAGGTTCTTT 
    AAAGTATCAG ATCCTACAAA AATGAGCAAG CGAAAGCGTC AAGAACGCAT TGAACCTCTC 
    TACGATAGAT ACCACGAACC TAATTCGTGG CGTTTGAGTA AAAGGCGAGC ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006374312.1
    CDS113..3646
    Translation

    Target ORF information:

    RefSeq Version XM_006374250.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 (LOC18105660), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006374250.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    ATGGCAACCG CAGCAGAAAA CGACGCCGGA TTGAAGAAGC TCGAGTACCT CTCCCTCGTC 
    TCCAAGGTCT GCAGCGAACT CGAAACTCAC TTGGGGTTTG GAGATAAGAT CTTAGCTGAG 
    TTCATCACCG AGTTAGGTCG GAGTTGCGAA ACAGTAGATG AGTTCGATGC GAAGCTGAAG 
    GAAAATGGAG CTGAAATGCC TGATTACTTT GTTCGGACAT TGCTGACGAT TATTCACGCG 
    ATTTTGCCGC CGAAAGCGGA GAAGGAGGGG AAGAAAGATA AGGAGAATGA TGGGTCAGGT 
    AAAGATTCTA AATTTAAAGC TCTCTCGATT AAAGATAGTA GAGACAGAGT GAAAGAAATT 
    GATAGGGAAT TGGAAATTGA AGCTGAAGAG AAAAGTAGAA GAGAGAATGA AGACAGGCAC 
    AGAGAAAGAG ATAACGATGA CAGACATATA GAGAGAGATA GGAGAGGGAG AGATAGGGAT 
    AGAGAGAGGG ATAGGGATAG GGATACAGAT AGAGAGAGAG AAAGAGATAT GTATGATAGA 
    GATGATAGGA GGAGAGATAG AGGAAGAAGG AGAGATGGAC ATGATATAGA GGATGGTGAA 
    GGTGAGAGGG AGAGAAGGAA TGGGAAACAT GGGTATGGTG GTGGTAATAG TAATGAGCCG 
    GAATTGTATG GGGTTTATAA GGGGAGGGTG TCGAGGGTGA TGGATACAGG TTGTTTTGTC 
    GAGTTGAGTG ATTTTAAGGG GAAGGAGGGT TTGGTTCATG TTTCGCAGAT TGCAACCAGG 
    AGAGTTGGGA ATGCAAAGGA CGTGGTTAAG AGGGACCAGG AAGTTTATGT TAAGGTGATT 
    TCAGTGTCGG GGAACAAGTT GAGTCTTTCG ATGAGGGATG TTGATCAGAA TAGTGGGAAA 
    GATTTGCTTC CATTGAAGAA GAGGGATGAT GAGGAGGATG GTTTTAGGAG CAATGCTTTG 
    GGTTTGTCTA AGGAGGGGCC GGTGACGAGG ACAGGGTTGT CAGGGATTAG GATTGTGGAG 
    GAGGAGGATA CTGGTCCGTC ACGGAGACCT TTAAAGAGAA TGAGCTCGCC AGAGAAGTGG 
    GAAGCAAAAC AGTTGATTGC TTCGGGGGTT TTGAGTGTGC AAGAGTACCC CATGTATGAT 
    GAGGAAATAG ATGGGTTGCT TTATCAAGAA GAGGGAGTTG AGGAAGAGCT TGAGATTGAG 
    ATGAATGAGG ATGAGCCTGC ATTTTTGCAA GGGCAGACTA GGTATTCTGT TGATATGTCA 
    CCAGTTAAGA TTTTTAAGAA TCCTGAAGGT TCGTTGAGTC GTGCAGCTGC TCTTCAGTCT 
    GCACTTATAA AGGAGAGGAG AGAAGTGAGG GAGCAGCAGC AGAGGACTAT GCTTGATTCA 
    ATACCAAAGG ATCTTAATCG TCCTTGGGAA GACCCAATGC CCGAGACTGG CGAGAGGCAT 
    CTTGCCCAGG AGCTGCGTGG TGTTGGCTTA TCTGCTTATG ACATGCCTGA ATGGAAGAAG 
    GATGCATTTG GGAAAGCACT GACATATGGG CAGCGATCCA AGTTATCTAT CCAGGAACAG 
    AGGCAGAGCT TGCCAATTTA CAAATTGAAA AAAGAGTTAA TTCAGGCTGT CCATGACAAT 
    CAGGTTCTGG TGGTTATTGG TGAGACAGGT TCAGGTAAGA CTACTCAGGT GACACAGTAT 
    CTTGCTGAGG CAGGTTATAC CACTAGGGGT AAGATTGGAT GTACTCAGCC TCGTAGGGTG 
    GCTGCTATGT CTGTAGCCAA GAGGGTGGCT GAAGAGTTTG GCTGTCGTTT AGGTGAGGAA 
    GTTGGCTATG CTATTCGTTT TGAGGATTGC ACTGGACCAG ATACTGTGAT CAAGTATATG 
    ACAGATGGTA TGCTGCTTAG GGAGATTCTG ATTGATGAGA ACCTTTCTCA GTACTCGGTG 
    ATAATGCTAG ATGAAGCTCA TGAGAGGACC ATTCACACTG ATGTCCTTTT CGGGTTGCTC 
    AAGAAACTTG TGAAGAGAAG ACCTGATCTT CGCTTGATTG TCACATCAGC CACACTGGAT 
    GCGGAGAAAT TTTCAGGGTA TTTCTTCAAC TGTAACATAT TCACGATTCC TGGGAGAACA 
    TTTCCTGTGG AGATATTGTA CACCAAACAG CCAGAAAGTG ACTACTTAGA TGCATCTCTG 
    ATTACTGTCT TGCAAATCCA CTTGACAGAA CCTGAAGGTG ACATACTTCT ATTCTTGACA 
    GGCCAGGAGG AGATTGATTT TGCATGTCAA TCTCTTTATG AGAGGATGAA AGGATTAGGA 
    AAAAATGTTC CTGAATTGAT CATTTTGCCT GTTTATAGTG CTCTTCCTAG TGAAATGCAG 
    TCAAGAATCT TTGATCCTGC CCCACCTGGA AAGAGGAAGG TGGTTGTGGC AACTAATATT 
    GCCGAAGCCT CTTTGACAAT TGATGGAATT TTTTATGTTA TTGATCCTGG GTTTGCCAAG 
    CAGAACGTGT ATAATCCAAA GCAAGGGCTT GATTCTCTAG TTATAACGCC AATTTCACAA 
    GCATCTGCCA AGCAACGAGC TGGACGTGCT GGGCGTACTG GGCCTGGAAA ATGTTATCGT 
    CTCTACACAG AAAGTGCATA CCGCAATGAG ATGTCTCCCA CCTCAATTCC AGAAATCCAA 
    AGAATTAATC TTGGATTCAC TACGCTTACA ATGAAGGCTA TGGGAATTAA TGACCTATTG 
    TCTTTTGATT TTATGGATCC ACCTTCACCG CAGGCCCTGA TTTCTGCCAT GGAACAGCTA 
    TACAGCCTTG GAGCTCTGGA TGAGGAAGGA CTTCTTACCA AACTAGGGAG GAAAATGGCA 
    GAATTTCCTC TGGATCCACC ATTGTCTAAA ATGTTGCTGG CTAGTGTAGA CCTCGGGTGC 
    AGTGATGAGA TTTTGACTAT GATTGCCATG ATCCAAACTG GTAACATCTT TTACAGACCT 
    AGAGAAAAAC AAGCTCAGGC TGATCAGAAG AGGGCCAAGT TTTTCCAGCC TGAGGGAGAC 
    CATCTGACTT TGCTTGCTGT GTACGAGGCT TGGAAAGCCA AGAACTTTTC AGGACCTTGG 
    TGTTTTGAGA ACTTTGTCCA ATCCCGATCC TTGAGGAGAG CACAGGATGT CAGAAAACAG 
    CTTCTAAGCA TCATGGACAA GTATAAACTA GATGTTGTTA GTGCTGGGAA GAATTTTACC 
    AAGATAAGGA AAGCGATTAC AGCTGGATTC TTTTTCCATG CAGCTAGAAA GGACCCACAG 
    GAGGGTTATC GGACTTTGGT TGAGAACCAG CCAGTTTATA TCCACCCCAG CAGTGCTCTT 
    TTCCAGAGAC AACCAGACTG GGTCATCTAC CATGAGCTGG TAATGACTAC AAAAGAGTAT 
    ATGCGTGAGG TCACGGTTAT AGATCCCAAG TGGCTTGTGG AACTAGCTCC CAGGTTCTTT 
    AAAGTATCAG ATCCTACAAA AATGAGCAAG CGAAAGCGTC AAGAACGCAT TGAACCTCTC 
    TACGATAGAT ACCACGAACC TAATTCGTGG CGTTTGAGTA AAAGGCGAGC ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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