ORF » Species Summary » Populus trichocarpa » LOC18102498 cDNA ORF clone

LOC18102498 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18102498 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18102498 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa24452 XM_006378307.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0010s09020g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa438139 XM_006378307.2
Latest version!		 Populus trichocarpa 3-ketoacyl-CoA synthase 11 (LOC18102498), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18102498 ( XM_006378307.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006378369.1 Populus trichocarpa hypothetical protein (POPTR_0010s09020g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa24452
    Clone ID Related Accession (Same CDS sequence) XM_006378307.1
    Accession Version XM_006378307.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1560bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008476). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAGATG AGAAGAAACA AAACCTGGAA AACAAACCTG CGTTGTCTCC ACCTCTACCC 
    GAGAGGAAGA AAAACACCTT ACCAAACTTC CTTTTATCTG TTCAGCTCAA ATATGTGAAA 
    CTTGGTTACC ACTACTTGGT TTCCAATGCC ATGTACCTCA TGCTCATGCC AGCACTTTGC 
    GTGATTTTTG CTCATCTTTC AACATTCACA GTTGATGAGC TTTGGAATCA ACTCAAATTC 
    AATTTTGTGA CAGTAGTTCT TTCCTCAACC TCAATTGTTT TTACTGCTAC ACTCTACTTC 
    ATGAGCCGTC CAAGAAAAGT TTACTTGGTG GATTTTTCAT GTTACAAGCC CGGACCAGCT 
    CATAAAGCAT CTAGAGAACT CTTCATGCAG TTATCTGCAG CGTCCGAGGT TTTCACAGAG 
    CAAAGCTTAG CTTTTCAAAA GAAAATCCTA GAGAAATCAG GCTATGGTGA AATGACCTAC 
    GCTCCAAAAG GCTTGATGCG TGTCCCGCCA GACCAGTCCA TGGCTGAATC CTGGAGGGAA 
    TCAGAGATGG TGATGTTCGG AGCAATTGAT GATCTCTTGG CCAAAACAAG GGTGAAGCCT 
    AGAGACATAG GAATACTCGT GGTGAATAGC AGTTTGTTCA ATCCCACGCC GTCTCTCTCA 
    GCTAGAGTTG TGAATCACTA CAAGCTTAGA GGGAACATTT TGAGCTATAA TCTTGGTGGT 
    ATGGGCTGCA GTGCAGGACT TATTTCTATT GATCTTGCCA AAGACCTTTT ACAGGTGCAT 
    CCCAACTCCT ATGCCCTAGT GGTGAGCACC GAGAACATTA CTCGCAACTG GTATTTTGGC 
    AATGACCGAT CGATGCTTGT CACCAACTGC CTCTTCCGTA TGGGAGCAGC CGCAGTCCTC 
    CTATCCAACC GGACATTTGA TCGTCGTCGC TCAAAGTATC AACTTATCCG TACTGTACGT 
    ACACATAAGG GTGCAGATGA TAAGTCCTTC AACTGTGTCT TGCAACGAGA GGATCTTGAC 
    ACCCAAAGAG TTGGCGTCTC TCTCTCAAAA GATCTAATGG CTATAGCTGG AGAAGCCCTT 
    GAAACGAATA TAACCACTCT GGGCCCATTA GTTCTTCCAG TCTCCGAACA ACTTCTATTC 
    TTTGTAACCT TAGTTGCCAA AAAAATCTTC AAGATGAAGG TAAAACCATA TATTCCTGAT 
    TTCAAGTTGG CATTTGAGCA CTTCTGCATC CACGCGGGAG GAAGAGGTGT GTTGGATGAG 
    ATTGAGAAAA ATCTAGAGCT CACTGAATGG CATATGGAGC CATCAAGAAT GACTCTTTAT 
    AGGTTTGGAA ATACCTCTAG CAGTTCTTTG TGGTATGAAT TGGCGTACTC CGAGGCCAAG 
    GGAAGGATCA AGAAGGGGGA CAGAATTTGG CAAATAGGTT TTGGTTCAGG ATTTAAGTGC 
    AACAGTGCCG TGTGGCGTGC TATAAGAGCT ATCGAACCGG CCAAAGAGAA GAATCCTTGG 
    ATGGATGAGA TTGATGACTT TCCAGTTCGT GTGCCTAGAG TGGCACCTCT TGTTTATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006378369.1
    CDS48..1607
    Translation

    Target ORF information:

    RefSeq Version XM_006378307.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0010s09020g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006378307.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAGATG AGAAGAAACA AAACCTGGAA AACAAACCTG CGTTGTCTCC ACCTCTACCC 
    GAGAGGAAGA AAAACACCTT ACCAAACTTC CTTTTATCTG TTCAGCTCAA ATATGTGAAA 
    CTTGGTTACC ACTACTTGGT TTCCAATGCC ATGTACCTCA TGCTCATGCC AGCACTTTGC 
    GTGATTTTTG CTCATCTTTC AACATTCACA GTTGATGAGC TTTGGAATCA ACTCAAATTC 
    AATTTTGTGA CAGTAGTTCT TTCCTCAACC TCAATTGTTT TTACTGCTAC ACTCTACTTC 
    ATGAGCCGTC CAAGAAAAGT TTACTTGGTG GATTTTTCAT GTTACAAGCC CGGACCAGCT 
    CATAAAGCAT CTAGAGAACT CTTCATGCAG TTATCTGCAG CGTCCGAGGT TTTCACAGAG 
    CAAAGCTTAG CTTTTCAAAA GAAAATCCTA GAGAAATCAG GCTATGGTGA AATGACCTAC 
    GCTCCAAAAG GCTTGATGCG TGTCCCGCCA GACCAGTCCA TGGCTGAATC CTGGAGGGAA 
    TCAGAGATGG TGATGTTCGG AGCAATTGAT GATCTCTTGG CCAAAACAAG GGTGAAGCCT 
    AGAGACATAG GAATACTCGT GGTGAATAGC AGTTTGTTCA ATCCCACGCC GTCTCTCTCA 
    GCTAGAGTTG TGAATCACTA CAAGCTTAGA GGGAACATTT TGAGCTATAA TCTTGGTGGT 
    ATGGGCTGCA GTGCAGGACT TATTTCTATT GATCTTGCCA AAGACCTTTT ACAGGTGCAT 
    CCCAACTCCT ATGCCCTAGT GGTGAGCACC GAGAACATTA CTCGCAACTG GTATTTTGGC 
    AATGACCGAT CGATGCTTGT CACCAACTGC CTCTTCCGTA TGGGAGCAGC CGCAGTCCTC 
    CTATCCAACC GGACATTTGA TCGTCGTCGC TCAAAGTATC AACTTATCCG TACTGTACGT 
    ACACATAAGG GTGCAGATGA TAAGTCCTTC AACTGTGTCT TGCAACGAGA GGATCTTGAC 
    ACCCAAAGAG TTGGCGTCTC TCTCTCAAAA GATCTAATGG CTATAGCTGG AGAAGCCCTT 
    GAAACGAATA TAACCACTCT GGGCCCATTA GTTCTTCCAG TCTCCGAACA ACTTCTATTC 
    TTTGTAACCT TAGTTGCCAA AAAAATCTTC AAGATGAAGG TAAAACCATA TATTCCTGAT 
    TTCAAGTTGG CATTTGAGCA CTTCTGCATC CACGCGGGAG GAAGAGGTGT GTTGGATGAG 
    ATTGAGAAAA ATCTAGAGCT CACTGAATGG CATATGGAGC CATCAAGAAT GACTCTTTAT 
    AGGTTTGGAA ATACCTCTAG CAGTTCTTTG TGGTATGAAT TGGCGTACTC CGAGGCCAAG 
    GGAAGGATCA AGAAGGGGGA CAGAATTTGG CAAATAGGTT TTGGTTCAGG ATTTAAGTGC 
    AACAGTGCCG TGTGGCGTGC TATAAGAGCT ATCGAACCGG CCAAAGAGAA GAATCCTTGG 
    ATGGATGAGA TTGATGACTT TCCAGTTCGT GTGCCTAGAG TGGCACCTCT TGTTTATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18102498 ( XM_006378307.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006378369.1 Populus trichocarpa 3-ketoacyl-CoA synthase 11 (LOC18102498), mRNA.
    Price & Availability↑
    CloneID OPa438139
    Clone ID Related Accession (Same CDS sequence) XM_006378307.2
    Accession Version XM_006378307.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1560bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 3-ketoacyl-CoA synthase 11
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006378307.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAGATG AGAAGAAACA AAACCTGGAA AACAAACCTG CGTTGTCTCC ACCTCTACCC 
    GAGAGGAAGA AAAACACCTT ACCAAACTTC CTTTTATCTG TTCAGCTCAA ATATGTGAAA 
    CTTGGTTACC ACTACTTGGT TTCCAATGCC ATGTACCTCA TGCTCATGCC AGCACTTTGC 
    GTGATTTTTG CTCATCTTTC AACATTCACA GTTGATGAGC TTTGGAATCA ACTCAAATTC 
    AATTTTGTGA CAGTAGTTCT TTCCTCAACC TCAATTGTTT TTACTGCTAC ACTCTACTTC 
    ATGAGCCGTC CAAGAAAAGT TTACTTGGTG GATTTTTCAT GTTACAAGCC CGGACCAGCT 
    CATAAAGCAT CTAGAGAACT CTTCATGCAG TTATCTGCAG CGTCCGAGGT TTTCACAGAG 
    CAAAGCTTAG CTTTTCAAAA GAAAATCCTA GAGAAATCAG GCTATGGTGA AATGACCTAC 
    GCTCCAAAAG GCTTGATGCG TGTCCCGCCA GACCAGTCCA TGGCTGAATC CTGGAGGGAA 
    TCAGAGATGG TGATGTTCGG AGCAATTGAT GATCTCTTGG CCAAAACAAG GGTGAAGCCT 
    AGAGACATAG GAATACTCGT GGTGAATAGC AGTTTGTTCA ATCCCACGCC GTCTCTCTCA 
    GCTAGAGTTG TGAATCACTA CAAGCTTAGA GGGAACATTT TGAGCTATAA TCTTGGTGGT 
    ATGGGCTGCA GTGCAGGACT TATTTCTATT GATCTTGCCA AAGACCTTTT ACAGGTGCAT 
    CCCAACTCCT ATGCCCTAGT GGTGAGCACC GAGAACATTA CTCGCAACTG GTATTTTGGC 
    AATGACCGAT CGATGCTTGT CACCAACTGC CTCTTCCGTA TGGGAGCAGC CGCAGTCCTC 
    CTATCCAACC GGACATTTGA TCGTCGTCGC TCAAAGTATC AACTTATCCG TACTGTACGT 
    ACACATAAGG GTGCAGATGA TAAGTCCTTC AACTGTGTCT TGCAACGAGA GGATCTTGAC 
    ACCCAAAGAG TTGGCGTCTC TCTCTCAAAA GATCTAATGG CTATAGCTGG AGAAGCCCTT 
    GAAACGAATA TAACCACTCT GGGCCCATTA GTTCTTCCAG TCTCCGAACA ACTTCTATTC 
    TTTGTAACCT TAGTTGCCAA AAAAATCTTC AAGATGAAGG TAAAACCATA TATTCCTGAT 
    TTCAAGTTGG CATTTGAGCA CTTCTGCATC CACGCGGGAG GAAGAGGTGT GTTGGATGAG 
    ATTGAGAAAA ATCTAGAGCT CACTGAATGG CATATGGAGC CATCAAGAAT GACTCTTTAT 
    AGGTTTGGAA ATACCTCTAG CAGTTCTTTG TGGTATGAAT TGGCGTACTC CGAGGCCAAG 
    GGAAGGATCA AGAAGGGGGA CAGAATTTGG CAAATAGGTT TTGGTTCAGG ATTTAAGTGC 
    AACAGTGCCG TGTGGCGTGC TATAAGAGCT ATCGAACCGG CCAAAGAGAA GAATCCTTGG 
    ATGGATGAGA TTGATGACTT CCCAGTTCGT GTGCCTAGAG TGGCACCTCT TGTTTATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006378369.1
    CDS1..1560
    Translation

    Target ORF information:

    RefSeq Version XM_006378307.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 3-ketoacyl-CoA synthase 11 (LOC18102498), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006378307.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCAGATG AGAAGAAACA AAACCTGGAA AACAAACCTG CGTTGTCTCC ACCTCTACCC 
    GAGAGGAAGA AAAACACCTT ACCAAACTTC CTTTTATCTG TTCAGCTCAA ATATGTGAAA 
    CTTGGTTACC ACTACTTGGT TTCCAATGCC ATGTACCTCA TGCTCATGCC AGCACTTTGC 
    GTGATTTTTG CTCATCTTTC AACATTCACA GTTGATGAGC TTTGGAATCA ACTCAAATTC 
    AATTTTGTGA CAGTAGTTCT TTCCTCAACC TCAATTGTTT TTACTGCTAC ACTCTACTTC 
    ATGAGCCGTC CAAGAAAAGT TTACTTGGTG GATTTTTCAT GTTACAAGCC CGGACCAGCT 
    CATAAAGCAT CTAGAGAACT CTTCATGCAG TTATCTGCAG CGTCCGAGGT TTTCACAGAG 
    CAAAGCTTAG CTTTTCAAAA GAAAATCCTA GAGAAATCAG GCTATGGTGA AATGACCTAC 
    GCTCCAAAAG GCTTGATGCG TGTCCCGCCA GACCAGTCCA TGGCTGAATC CTGGAGGGAA 
    TCAGAGATGG TGATGTTCGG AGCAATTGAT GATCTCTTGG CCAAAACAAG GGTGAAGCCT 
    AGAGACATAG GAATACTCGT GGTGAATAGC AGTTTGTTCA ATCCCACGCC GTCTCTCTCA 
    GCTAGAGTTG TGAATCACTA CAAGCTTAGA GGGAACATTT TGAGCTATAA TCTTGGTGGT 
    ATGGGCTGCA GTGCAGGACT TATTTCTATT GATCTTGCCA AAGACCTTTT ACAGGTGCAT 
    CCCAACTCCT ATGCCCTAGT GGTGAGCACC GAGAACATTA CTCGCAACTG GTATTTTGGC 
    AATGACCGAT CGATGCTTGT CACCAACTGC CTCTTCCGTA TGGGAGCAGC CGCAGTCCTC 
    CTATCCAACC GGACATTTGA TCGTCGTCGC TCAAAGTATC AACTTATCCG TACTGTACGT 
    ACACATAAGG GTGCAGATGA TAAGTCCTTC AACTGTGTCT TGCAACGAGA GGATCTTGAC 
    ACCCAAAGAG TTGGCGTCTC TCTCTCAAAA GATCTAATGG CTATAGCTGG AGAAGCCCTT 
    GAAACGAATA TAACCACTCT GGGCCCATTA GTTCTTCCAG TCTCCGAACA ACTTCTATTC 
    TTTGTAACCT TAGTTGCCAA AAAAATCTTC AAGATGAAGG TAAAACCATA TATTCCTGAT 
    TTCAAGTTGG CATTTGAGCA CTTCTGCATC CACGCGGGAG GAAGAGGTGT GTTGGATGAG 
    ATTGAGAAAA ATCTAGAGCT CACTGAATGG CATATGGAGC CATCAAGAAT GACTCTTTAT 
    AGGTTTGGAA ATACCTCTAG CAGTTCTTTG TGGTATGAAT TGGCGTACTC CGAGGCCAAG 
    GGAAGGATCA AGAAGGGGGA CAGAATTTGG CAAATAGGTT TTGGTTCAGG ATTTAAGTGC 
    AACAGTGCCG TGTGGCGTGC TATAAGAGCT ATCGAACCGG CCAAAGAGAA GAATCCTTGG 
    ATGGATGAGA TTGATGACTT CCCAGTTCGT GTGCCTAGAG TGGCACCTCT TGTTTATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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