ORF » Species Summary » Populus trichocarpa » LOC18102202 cDNA ORF clone

LOC18102202 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18102202 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18102202 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa436693 XM_024608987.1
Latest version!		 Populus trichocarpa indole-3-acetaldehyde oxidase (LOC18102202), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $727.30
$1039.00
OPa436694 XM_006379277.2
Latest version!		 Populus trichocarpa indole-3-acetaldehyde oxidase (LOC18102202), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18102202 ( XM_024608987.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024464755.1 Populus trichocarpa indole-3-acetaldehyde oxidase (LOC18102202), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa436693
    Clone ID Related Accession (Same CDS sequence) XM_024608987.1
    Accession Version XM_024608987.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4122bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product indole-3-acetaldehyde oxidase isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    ATGGAAGAGG AGCAGAGGGA AACAGGCAAA GCTGGGAGTC TAGTCTTTGC CGTCAACGGA 
    CAGAGGTTCG AGGTGTCGTC GAGAGTAGAC CCTTCAACAA CCTTGCTTGA GTTCTTGCGT 
    ACCAGGACAT CTTTCAAGAG CGTCAAGCTC GGTTGTGGCG AAGGTGGTTG TGGTGCTTGC 
    ATTGTTCTAC TCTCCAAGTA TGATCCTGTG CTTGACCAAG TTGAGGATTT CACAATCAGT 
    TCATGTCTCA CACTGCTTTG CAGTGTGAAT GGATGTTCGG TTACAACATC GGAAGGCCTT 
    GGAAATAGCA AAGATGGATT CCATCCGATT CACCAGAGGT TCAGTGGTTT CCATGCTTCT 
    CAATGTGGCT TTTGTACTCC TGGAATGTGT GTTTCACTCT TCGGAGCCCT TGTTAAAGCT 
    GAAAAGAATG ACCAAAGGGA GCCTTCTCCA GGATTCTCCA AGCTGACAGT CGTTGAAGCT 
    GAAAAGGCTA TCTCAGGAAA TCTTTGTCGC TGTACTGGAT ATCGACCCAT TGCTGATGCG 
    TGTAAGAGTT TTGCAGCTGA TGTTGATATT GAAGATTTGG GATTAAACTC TTTTTGGAAG 
    AAGGAAGAGA GTCCCGAAGC GAAGATGAGT AGGCTACCTT TATATGACCA TAATCATGAG 
    ATATGCACTT TCCCTGAATT TTTGAAAAGG GAAATAAAAT CTTCCTTGCT TTTGGATTCT 
    GAAAGATATT CTTGGTGCAC ACCTGCTACT GTTGAGGAGC TTCAGAGCTT ATTAAAAAGC 
    ATTGATGCCG ACTGCAAAAC CAGGATGAAA CTAGTGGTTG GTAACACAGG TATGGGTTAT 
    TACAAGGACC TAGAGCACCA TGACAGGTAC ATAGATCTCA GATGTGTTCT GGAGCTCTCG 
    AGTATTAGGA GGGATGAAGA AGGAATCGAA ATCGGGGCAG CTGTCACTAT TTCTAAAACT 
    ATTGAAGCTC TGAAGGAAGA AAATAACAGT GAGTTTAATT CAGAATGCAA GATTGTGTTT 
    AAAAGAATTG CATTGCACAT GGAGAAGATT GCTTCTGAAT TTGTTCGAAA TACAGGCAGT 
    GTAGGGGGGA ATTTGGTGAT GGCACAAAGG AAACATTTTC CATCAGATAT TGCCACGATA 
    CTGCTGGCAG CAGGTGCATT TGTTCACATT CTAACTGGTA CCTTGCATGA AAAGCTTACT 
    TTAGATGAGT TTCTGGAAAG GCCTCCATTG GATTCCAAAA GTGTGCTATT AAATATTAAG 
    ATTCCAAATT ATGCAGCATC CAAGAACATA TCTTCTGAAA TGGACAGCAA GTTGTTATTC 
    GAAACTTATC GTGCTGCACC GCGACCCCTT GGAAATGCAT TGCCCTATTT AAATGCAGCT 
    TTCTTGTCTG AAGTTTCCTG TTTGAAATCT TCTGGTTCAG CCGTGTTAAA TAAATGCCGG 
    GTCGTTTTTG GTGCTTATGG AACCAAACAT GCTATCAGAG CAAAGGAAGT TGAGAAATTT 
    TTGTCTGGAA AAATACTAAC CATTGGTGTT CTATATGAAG CTGTTAAACT GGTTAAAGCC 
    AATGTGGTTC CTGAAGATGG CACGCCGAGT CCGGCCTTCA GGTCAAGCTT AGCTGCTGGT 
    TATCTCTTTG ACTTTCTCTA CCCCTTGGTA GACATTAACT CTAAAATTTC TGGTGTTTGG 
    TCGGATGAAT ATTGTAATAC TTCATTGTTC AAGGATGCAA AAATAAAACA GAAGTACAGC 
    CAGCTTGATC ATGTTCAATT ACCCACTTTG CTGTCATCAT CAGAGCAGGT GCTTGAATTA 
    AACAATGATC ATCATCCTGT TGGTCAGCCT ACTAAGAAAG TTGGAGCCGC CCTTCAAGCT 
    TCTGGAGAGG CTGTTTTTGT GGATGACATT CCCTCTCCTA CAAATTGTCT ACATGGAGCA 
    TTCATTCATA GCATGAAGCC TTATGCAAGG GTCAAGAATA TCAAATTCAA GTCTAAATTA 
    CTACCAGATG GAGTTTCTGG GCTGATTTCG GTCAGAGACA TTCCAAAAGG TGGGGAGAAC 
    AGAGGTTGCA CGACTAGGTT TGGCACTGAA TCTTTGTTCG CAGATGAGCT TACGCAGTAT 
    GCTGGAGAGC GTCTTGCTTT TGTGGTTGCA GATACACAGA AACATGCTGA TATAGCATCC 
    AACCTTGTTG AAGTTGATTA TGACATTGAA AATCTAGAAC CACCCATTTT AACTGTAGAA 
    GAGGCCATTA AGAGATCTAG CCTTCTCGAG GTTCCTCTTC TCCTCTACCC CAAACAAGTT 
    GGTGATATAT CAAAAGGATT GGCTGAGGCT GATCACAAGA TTCTCTCTGC CAAGATAAAA 
    CTCGGTTCAC AGTACCATTT CTATATGGAG ACTCAAACTG CCCTTGCGCT TCCTGATGAA 
    AACAACTGCA TGGTGGTTTA CAGTTCAACC CAGTGTCCCG AATATGCACA TGTTAACATT 
    GCAAAATGTC TTGGTATTCC TGAGCATAAT GTGCGTGTGA TTACAAGGAG AGTCGGAGGA 
    GGCTTTGGTG GAAAGGCCAT GAAAGCAATT CCTGTTGCTA CAGCATGTGC TCTTGCAGCG 
    CACAAGTTTC GTCGCCCTGT GAGAACGTAT TTGAATCGCA AGACCGATAT GATAATGGCA 
    GGAGGAAGGC ATCCCATGGA AATAACTTAT AATGTAGGAT TTAAATCAAA TGGGAAAGTT 
    ACAGCCTTAC AGCTTGATAT ATTAATCAAT GCTGGAATAT CTTTAGATAT AAGTCCACTG 
    ATGCCAAAAA ACATTCTGAG TGGGCTAAAA AAGTATGACT GGGGTGCTTT ATCTTTTGAT 
    ATAAAGGTAT GCAAAACAAA TCATTCAAGT AAAACTGCAA TGCGAGGCCC TGGGGAGGTA 
    CAAGGATCAT ACATTGCAGA AACCGTAATC GAACATGTAG CGTCTACCCT TTCCATGGAT 
    GTAGATTCTG TGAGAAACAT AAATTTTCAC AGATATGATA GCCTTAAATT ATTCTATGAT 
    GTTGCCTCAG GTGATTCTGT AGAGTATACT CTAACATCAA TATGGAATAA GTTAGCAGAA 
    TCTTCAAGCT TCAAACAAAG GGTTGAAATA ATAAAGGAGT TCAATAGGTG TAAGGTGTGG 
    AAGAAAAGAG GTATTTCTCG AGTGCCTATT GTGCATCAAG TGTTCGTGCG ACCAACTCCG 
    GGGAAAGTAA GCATTCTAAG TGATGGGTCG GTTGTCGTTG AAGTCGGCGG AATAGAGTTG 
    GGTCAAGGGC TCTGGACAAA GGTAAAACAA ATGGCTGCAT TTGCTCTCAG CTCAATCAAA 
    TGTGACGGGG TAGAAAATCT TCTGGACAAA GTAAGGGTAA TACAAGCTGA TACTCTGAGT 
    TTAACTCAAG GAGGAATGAC TGCAGGGAGC ACCACATCAG AGTCAAGCTG TGAATCAGTT 
    AGACTTTGCT GTGCAGTCTT GGTTGAGAGA CTGGGACCTC TAAAGGAAAC GTTGCAGGGG 
    CAAATGGGTT CCGTAACATG GGATGCGCTC ATTTGCAAGG CATATGTGGG ATCACTGAAT 
    TTATCAGCAT CTTCACATTA CATCCCTGAC TTTACTTCGA TGCACTACTT AAACTATGGC 
    GCTGCAGTAA GTGAGGTAGA GGTAAACCTT CTGACAGGGG AAACAACTAT TTTGAGATCA 
    GATATTATAT ACGATTGTGG ACAAAGTCTC AACCCTGCGG TGGATTTAGG ACAGATTGAA 
    GGAGCCTTTG TCCAAGGGAT TGGTTTTTTT ATGCTTGAAG AGTACACGAC GAATTCTGAT 
    GGACTAGTGG TTGCAGACAG CACATGGACA TATAAGATCC CTACAATAGA CACCATACCA 
    AAACAATTCA ATGTGGAAAT ACACAACAGT GGACATCACC AGAAACGTGT TCTCTCTTCA 
    AAAGCTTCCG GGGAGCCACC GCTACTCCTT GCAGCATCAG TTCACTGTGC TACAAGGGCA 
    GCTATAAGAG ATGCTAGACA ACAGCTTCAT TCATGGGGTT GCATGGACGA GTCTTACTCA 
    ACATTCAACT TGGAGGTCCC TGCCACCATG CCTAAGGTGA AGGAACTTTG TGGGCTGGAC 
    AATGTGGAAA GGTACTTAGG GTGGAAAATG GGTAGAAAGT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024464755.1
    CDS135..4256
    Translation

    Target ORF information:

    RefSeq Version XM_024608987.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa indole-3-acetaldehyde oxidase (LOC18102202), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024608987.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    ATGGAAGAGG AGCAGAGGGA AACAGGCAAA GCTGGGAGTC TAGTCTTTGC CGTCAACGGA 
    CAGAGGTTCG AGGTGTCGTC GAGAGTAGAC CCTTCAACAA CCTTGCTTGA GTTCTTGCGT 
    ACCAGGACAT CTTTCAAGAG CGTCAAGCTC GGTTGTGGCG AAGGTGGTTG TGGTGCTTGC 
    ATTGTTCTAC TCTCCAAGTA TGATCCTGTG CTTGACCAAG TTGAGGATTT CACAATCAGT 
    TCATGTCTCA CACTGCTTTG CAGTGTGAAT GGATGTTCGG TTACAACATC GGAAGGCCTT 
    GGAAATAGCA AAGATGGATT CCATCCGATT CACCAGAGGT TCAGTGGTTT CCATGCTTCT 
    CAATGTGGCT TTTGTACTCC TGGAATGTGT GTTTCACTCT TCGGAGCCCT TGTTAAAGCT 
    GAAAAGAATG ACCAAAGGGA GCCTTCTCCA GGATTCTCCA AGCTGACAGT CGTTGAAGCT 
    GAAAAGGCTA TCTCAGGAAA TCTTTGTCGC TGTACTGGAT ATCGACCCAT TGCTGATGCG 
    TGTAAGAGTT TTGCAGCTGA TGTTGATATT GAAGATTTGG GATTAAACTC TTTTTGGAAG 
    AAGGAAGAGA GTCCCGAAGC GAAGATGAGT AGGCTACCTT TATATGACCA TAATCATGAG 
    ATATGCACTT TCCCTGAATT TTTGAAAAGG GAAATAAAAT CTTCCTTGCT TTTGGATTCT 
    GAAAGATATT CTTGGTGCAC ACCTGCTACT GTTGAGGAGC TTCAGAGCTT ATTAAAAAGC 
    ATTGATGCCG ACTGCAAAAC CAGGATGAAA CTAGTGGTTG GTAACACAGG TATGGGTTAT 
    TACAAGGACC TAGAGCACCA TGACAGGTAC ATAGATCTCA GATGTGTTCT GGAGCTCTCG 
    AGTATTAGGA GGGATGAAGA AGGAATCGAA ATCGGGGCAG CTGTCACTAT TTCTAAAACT 
    ATTGAAGCTC TGAAGGAAGA AAATAACAGT GAGTTTAATT CAGAATGCAA GATTGTGTTT 
    AAAAGAATTG CATTGCACAT GGAGAAGATT GCTTCTGAAT TTGTTCGAAA TACAGGCAGT 
    GTAGGGGGGA ATTTGGTGAT GGCACAAAGG AAACATTTTC CATCAGATAT TGCCACGATA 
    CTGCTGGCAG CAGGTGCATT TGTTCACATT CTAACTGGTA CCTTGCATGA AAAGCTTACT 
    TTAGATGAGT TTCTGGAAAG GCCTCCATTG GATTCCAAAA GTGTGCTATT AAATATTAAG 
    ATTCCAAATT ATGCAGCATC CAAGAACATA TCTTCTGAAA TGGACAGCAA GTTGTTATTC 
    GAAACTTATC GTGCTGCACC GCGACCCCTT GGAAATGCAT TGCCCTATTT AAATGCAGCT 
    TTCTTGTCTG AAGTTTCCTG TTTGAAATCT TCTGGTTCAG CCGTGTTAAA TAAATGCCGG 
    GTCGTTTTTG GTGCTTATGG AACCAAACAT GCTATCAGAG CAAAGGAAGT TGAGAAATTT 
    TTGTCTGGAA AAATACTAAC CATTGGTGTT CTATATGAAG CTGTTAAACT GGTTAAAGCC 
    AATGTGGTTC CTGAAGATGG CACGCCGAGT CCGGCCTTCA GGTCAAGCTT AGCTGCTGGT 
    TATCTCTTTG ACTTTCTCTA CCCCTTGGTA GACATTAACT CTAAAATTTC TGGTGTTTGG 
    TCGGATGAAT ATTGTAATAC TTCATTGTTC AAGGATGCAA AAATAAAACA GAAGTACAGC 
    CAGCTTGATC ATGTTCAATT ACCCACTTTG CTGTCATCAT CAGAGCAGGT GCTTGAATTA 
    AACAATGATC ATCATCCTGT TGGTCAGCCT ACTAAGAAAG TTGGAGCCGC CCTTCAAGCT 
    TCTGGAGAGG CTGTTTTTGT GGATGACATT CCCTCTCCTA CAAATTGTCT ACATGGAGCA 
    TTCATTCATA GCATGAAGCC TTATGCAAGG GTCAAGAATA TCAAATTCAA GTCTAAATTA 
    CTACCAGATG GAGTTTCTGG GCTGATTTCG GTCAGAGACA TTCCAAAAGG TGGGGAGAAC 
    AGAGGTTGCA CGACTAGGTT TGGCACTGAA TCTTTGTTCG CAGATGAGCT TACGCAGTAT 
    GCTGGAGAGC GTCTTGCTTT TGTGGTTGCA GATACACAGA AACATGCTGA TATAGCATCC 
    AACCTTGTTG AAGTTGATTA TGACATTGAA AATCTAGAAC CACCCATTTT AACTGTAGAA 
    GAGGCCATTA AGAGATCTAG CCTTCTCGAG GTTCCTCTTC TCCTCTACCC CAAACAAGTT 
    GGTGATATAT CAAAAGGATT GGCTGAGGCT GATCACAAGA TTCTCTCTGC CAAGATAAAA 
    CTCGGTTCAC AGTACCATTT CTATATGGAG ACTCAAACTG CCCTTGCGCT TCCTGATGAA 
    AACAACTGCA TGGTGGTTTA CAGTTCAACC CAGTGTCCCG AATATGCACA TGTTAACATT 
    GCAAAATGTC TTGGTATTCC TGAGCATAAT GTGCGTGTGA TTACAAGGAG AGTCGGAGGA 
    GGCTTTGGTG GAAAGGCCAT GAAAGCAATT CCTGTTGCTA CAGCATGTGC TCTTGCAGCG 
    CACAAGTTTC GTCGCCCTGT GAGAACGTAT TTGAATCGCA AGACCGATAT GATAATGGCA 
    GGAGGAAGGC ATCCCATGGA AATAACTTAT AATGTAGGAT TTAAATCAAA TGGGAAAGTT 
    ACAGCCTTAC AGCTTGATAT ATTAATCAAT GCTGGAATAT CTTTAGATAT AAGTCCACTG 
    ATGCCAAAAA ACATTCTGAG TGGGCTAAAA AAGTATGACT GGGGTGCTTT ATCTTTTGAT 
    ATAAAGGTAT GCAAAACAAA TCATTCAAGT AAAACTGCAA TGCGAGGCCC TGGGGAGGTA 
    CAAGGATCAT ACATTGCAGA AACCGTAATC GAACATGTAG CGTCTACCCT TTCCATGGAT 
    GTAGATTCTG TGAGAAACAT AAATTTTCAC AGATATGATA GCCTTAAATT ATTCTATGAT 
    GTTGCCTCAG GTGATTCTGT AGAGTATACT CTAACATCAA TATGGAATAA GTTAGCAGAA 
    TCTTCAAGCT TCAAACAAAG GGTTGAAATA ATAAAGGAGT TCAATAGGTG TAAGGTGTGG 
    AAGAAAAGAG GTATTTCTCG AGTGCCTATT GTGCATCAAG TGTTCGTGCG ACCAACTCCG 
    GGGAAAGTAA GCATTCTAAG TGATGGGTCG GTTGTCGTTG AAGTCGGCGG AATAGAGTTG 
    GGTCAAGGGC TCTGGACAAA GGTAAAACAA ATGGCTGCAT TTGCTCTCAG CTCAATCAAA 
    TGTGACGGGG TAGAAAATCT TCTGGACAAA GTAAGGGTAA TACAAGCTGA TACTCTGAGT 
    TTAACTCAAG GAGGAATGAC TGCAGGGAGC ACCACATCAG AGTCAAGCTG TGAATCAGTT 
    AGACTTTGCT GTGCAGTCTT GGTTGAGAGA CTGGGACCTC TAAAGGAAAC GTTGCAGGGG 
    CAAATGGGTT CCGTAACATG GGATGCGCTC ATTTGCAAGG CATATGTGGG ATCACTGAAT 
    TTATCAGCAT CTTCACATTA CATCCCTGAC TTTACTTCGA TGCACTACTT AAACTATGGC 
    GCTGCAGTAA GTGAGGTAGA GGTAAACCTT CTGACAGGGG AAACAACTAT TTTGAGATCA 
    GATATTATAT ACGATTGTGG ACAAAGTCTC AACCCTGCGG TGGATTTAGG ACAGATTGAA 
    GGAGCCTTTG TCCAAGGGAT TGGTTTTTTT ATGCTTGAAG AGTACACGAC GAATTCTGAT 
    GGACTAGTGG TTGCAGACAG CACATGGACA TATAAGATCC CTACAATAGA CACCATACCA 
    AAACAATTCA ATGTGGAAAT ACACAACAGT GGACATCACC AGAAACGTGT TCTCTCTTCA 
    AAAGCTTCCG GGGAGCCACC GCTACTCCTT GCAGCATCAG TTCACTGTGC TACAAGGGCA 
    GCTATAAGAG ATGCTAGACA ACAGCTTCAT TCATGGGGTT GCATGGACGA GTCTTACTCA 
    ACATTCAACT TGGAGGTCCC TGCCACCATG CCTAAGGTGA AGGAACTTTG TGGGCTGGAC 
    AATGTGGAAA GGTACTTAGG GTGGAAAATG GGTAGAAAGT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18102202 ( XM_006379277.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006379339.2 Populus trichocarpa indole-3-acetaldehyde oxidase (LOC18102202), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa436694
    Clone ID Related Accession (Same CDS sequence) XM_006379277.2
    Accession Version XM_006379277.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3624bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product abscisic-aldehyde oxidase isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006379277.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    ATGGAAGAGG AGCAGAGGGA AACAGGCAAA GCTGGGAGTC TAGTCTTTGC CGTCAACGGA 
    CAGAGGTTCG AGGTGTCGTC GAGAGTAGAC CCTTCAACAA CCTTGCTTGA GTTCTTGCGT 
    ACCAGGACAT CTTTCAAGAG CGTCAAGCTC GGTTGTGGCG AAGGTGGTTG TGGTGCTTGC 
    ATTGTTCTAC TCTCCAAGTA TGATCCTGTG CTTGACCAAG TTGAGGATTT CACAATCAGT 
    TCATGTCTCA CACTGCTTTG CAGTGTGAAT GGATGTTCGG TTACAACATC GGAAGGCCTT 
    GGAAATAGCA AAGATGGATT CCATCCGATT CACCAGAGGT TCAGTGGTTT CCATGCTTCT 
    CAATGTGGCT TTTGTACTCC TGGAATGTGT GTTTCACTCT TCGGAGCCCT TGTTAAAGCT 
    GAAAAGAATG ACCAAAGGGA GCCTTCTCCA GGATTCTCCA AGCTGACAGT CGTTGAAGCT 
    GAAAAGGCTA TCTCAGGAAA TCTTTGTCGC TGTACTGGAT ATCGACCCAT TGCTGATGCG 
    TGTAAGAGTT TTGCAGCTGA TGTTGATATT GAAGATTTGG GATTAAACTC TTTTTGGAAG 
    AAGGAAGAGA GTCCCGAAGC GAAGATGAGT AGGCTACCTT TATATGACCA TAATCATGAG 
    ATATGCACTT TCCCTGAATT TTTGAAAAGG GAAATAAAAT CTTCCTTGCT TTTGGATTCT 
    GAAAGATATT CTTGGTGCAC ACCTGCTACT GTTGAGGAGC TTCAGAGCTT ATTAAAAAGC 
    ATTGATGCCG ACTGCAAAAC CAGGATGAAA CTAGTGGTTG GTAACACAGG TATGGGTTAT 
    TACAAGGACC TAGAGCACCA TGACAGGTAC ATAGATCTCA GATGTGTTCT GGAGCTCTCG 
    AGTATTAGGA GGGATGAAGA AGGAATCGAA ATCGGGGCAG CTGTCACTAT TTCTAAAACT 
    ATTGAAGCTC TGAAGGAAGA AAATAACAGT GAGTTTAATT CAGAATGCAA GATTGTGTTT 
    AAAAGAATTG CATTGCACAT GGAGAAGATT GCTTCTGAAT TTGTTCGAAA TACAGGCAGT 
    GTAGGGGGGA ATTTGGTGAT GGCACAAAGG AAACATTTTC CATCAGATAT TGCCACGATA 
    CTGCTGGCAG CAGGTGCATT TGTTCACATT CTAACTGGTA CCTTGCATGA AAAGCTTACT 
    TTAGATGAGT TTCTGGAAAG GCCTCCATTG GATTCCAAAA GTGTGCTATT AAATATTAAG 
    ATTCCAAATT ATGCAGCATC CAAGAACATA TCTTCTGAAA TGGACAGCAA GTTGTTATTC 
    GAAACTTATC GTGCTGCACC GCGACCCCTT GGAAATGCAT TGCCCTATTT AAATGCAGCT 
    TTCTTGTCTG AAGTTTCCTG TTTGAAATCT TCTGGTTCAG CCGTGTTAAA TAAATGCCGG 
    GTCGTTTTTG GTGCTTATGG AACCAAACAT GCTATCAGAG CAAAGGAAGT TGAGAAATTT 
    TTGTCTGGAA AAATACTAAC CATTGGTGTT CTATATGAAG CTGTTAAACT GGTTAAAGCC 
    AATGTGGTTC CTGAAGATGG CACGCCGAGT CCGGCCTTCA GGTCAAGCTT AGCTGCTGGT 
    TATCTCTTTG ACTTTCTCTA CCCCTTGGTA GACATTAACT CTAAAATTTC TGGTGTTTGG 
    TCGGATGAAT ATTGTAATAC TTCATTGTTC AAGGATGCAA AAATAAAACA GAAGTACAGC 
    CAGCTTGATC ATGTTCAATT ACCCACTTTG CTGTCATCAT CAGAGCAGGT GCTTGAATTA 
    AACAATGATC ATCATCCTGT TGGTCAGCCT ACTAAGAAAG TTGGAGCCGC CCTTCAAGCT 
    TCTGGAGAGG CTGTTTTTGT GGATGACATT CCCTCTCCTA CAAATTGTCT ACATGGAGCA 
    TTCATTCATA GCATGAAGCC TTATGCAAGG GTCAAGAATA TCAAATTCAA GTCTAAATTA 
    CTACCAGATG GAGTTTCTGG GCTGATTTCG GTCAGAGACA TTCCAAAAGG TGGGGAGAAC 
    AGAGGTTGCA CGACTAGGTT TGGCACTGAA TCTTTGTTCG CAGATGAGCT TACGCAGTAT 
    GCTGGAGAGC GTCTTGCTTT TGTGGTTGCA GATACACAGA AACATGCTGA TATAGCATCC 
    AACCTTGTTG AAGTTGATTA TGACATTGAA AATCTAGAAC CACCCATTTT AACTGTAGAA 
    GAGGCCATTA AGAGATCTAG CCTTCTCGAG GTTCCTCTTC TCCTCTACCC CAAACAAGTT 
    GGTGATATAT CAAAAGGATT GGCTGAGGCT GATCACAAGA TTCTCTCTGC CAAGATAAAA 
    CTCGGTTCAC AGTACCATTT CTATATGGAG ACTCAAACTG CCCTTGCGCT TCCTGATGAA 
    AACAACTGCA TGGTGGTTTA CAGTTCAACC CAGTGTCCCG AATATGCACA TGTTAACATT 
    GCAAAATGTC TTGGTATTCC TGAGCATAAT GTGCGTGTGA TTACAAGGAG AGTCGGAGGA 
    GGCTTTGGTG GAAAGGCCAT GAAAGCAATT CCTGTTGCTA CAGCATGTGC TCTTGCAGCG 
    CACAAGTTTC GTCGCCCTGT GAGAACGTAT TTGAATCGCA AGACCGATAT GATAATGGCA 
    GGAGGAAGGC ATCCCATGGA AATAACTTAT AATGTAGGAT TTAAATCAAA TGGGAAAGTT 
    ACAGCCTTAC AGCTTGATAT ATTAATCAAT GCTGGAATAT CTTTAGATAT AAGTCCACTG 
    ATGCCAAAAA ACATTCTGAG TGGGCTAAAA AAGTATGACT GGGGTGCTTT ATCTTTTGAT 
    ATAAAGGTAT GCAAAACAAA TCATTCAAGT AAAACTGCAA TGCGAGGCCC TGGGGAGGTA 
    CAAGGATCAT ACATTGCAGA AACCGTAATC GAACATGTAG CGTCTACCCT TTCCATGGAT 
    GTAGATTCTG TGAGAAACAT AAATTTTCAC AGATATGATA GCCTTAAATT ATTCTATGAT 
    GTTGCCTCAG GTGATTCTGT AGAGTATACT CTAACATCAA TATGGAATAA GTTAGCAGAA 
    TCTTCAAGCT TCAAACAAAG GGTTGAAATA ATAAAGGAGT TCAATAGGTG TAAGGTGTGG 
    AAGAAAAGAG GTATTTCTCG AGTGCCTATT GTGCATCAAG TGTTCGTGCG ACCAACTCCG 
    GGGAAAGTAA GCATTCTAAG TGATGGGTCG GTTGTCGTTG AAGTCGGCGG AATAGAGTTG 
    GGTCAAGGGC TCTGGACAAA GGTAAAACAA ATGGCTGCAT TTGCTCTCAG CTCAATCAAA 
    TGTGACGGGG TAGAAAATCT TCTGGACAAA GTAAGGGTAA TACAAGCTGA TACTCTGAGT 
    TTAACTCAAG GAGGAATGAC TGCAGGGAGC ACCACATCAG AGTCAAGCTG TGAATCAGTT 
    AGACTTTGCT GTGCAGTCTT GGTTGAGAGA CTGGGACCTC TAAAGGAAAC GTTGCAGGGG 
    CAAATGGGTT CCGTAACATG GGATGCGCTC ATTTGCAAGG CATATGTGGG ATCACTGAAT 
    TTATCAGCAT CTTCACATTA CATCCCTGAC TTTACTTCGA TGCACTACTT AAACTATGGC 
    GCTGCAGTAA GTGAGGAATA CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006379339.2
    CDS150..3773
    Translation

    Target ORF information:

    RefSeq Version XM_006379277.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa indole-3-acetaldehyde oxidase (LOC18102202), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006379277.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    ATGGAAGAGG AGCAGAGGGA AACAGGCAAA GCTGGGAGTC TAGTCTTTGC CGTCAACGGA 
    CAGAGGTTCG AGGTGTCGTC GAGAGTAGAC CCTTCAACAA CCTTGCTTGA GTTCTTGCGT 
    ACCAGGACAT CTTTCAAGAG CGTCAAGCTC GGTTGTGGCG AAGGTGGTTG TGGTGCTTGC 
    ATTGTTCTAC TCTCCAAGTA TGATCCTGTG CTTGACCAAG TTGAGGATTT CACAATCAGT 
    TCATGTCTCA CACTGCTTTG CAGTGTGAAT GGATGTTCGG TTACAACATC GGAAGGCCTT 
    GGAAATAGCA AAGATGGATT CCATCCGATT CACCAGAGGT TCAGTGGTTT CCATGCTTCT 
    CAATGTGGCT TTTGTACTCC TGGAATGTGT GTTTCACTCT TCGGAGCCCT TGTTAAAGCT 
    GAAAAGAATG ACCAAAGGGA GCCTTCTCCA GGATTCTCCA AGCTGACAGT CGTTGAAGCT 
    GAAAAGGCTA TCTCAGGAAA TCTTTGTCGC TGTACTGGAT ATCGACCCAT TGCTGATGCG 
    TGTAAGAGTT TTGCAGCTGA TGTTGATATT GAAGATTTGG GATTAAACTC TTTTTGGAAG 
    AAGGAAGAGA GTCCCGAAGC GAAGATGAGT AGGCTACCTT TATATGACCA TAATCATGAG 
    ATATGCACTT TCCCTGAATT TTTGAAAAGG GAAATAAAAT CTTCCTTGCT TTTGGATTCT 
    GAAAGATATT CTTGGTGCAC ACCTGCTACT GTTGAGGAGC TTCAGAGCTT ATTAAAAAGC 
    ATTGATGCCG ACTGCAAAAC CAGGATGAAA CTAGTGGTTG GTAACACAGG TATGGGTTAT 
    TACAAGGACC TAGAGCACCA TGACAGGTAC ATAGATCTCA GATGTGTTCT GGAGCTCTCG 
    AGTATTAGGA GGGATGAAGA AGGAATCGAA ATCGGGGCAG CTGTCACTAT TTCTAAAACT 
    ATTGAAGCTC TGAAGGAAGA AAATAACAGT GAGTTTAATT CAGAATGCAA GATTGTGTTT 
    AAAAGAATTG CATTGCACAT GGAGAAGATT GCTTCTGAAT TTGTTCGAAA TACAGGCAGT 
    GTAGGGGGGA ATTTGGTGAT GGCACAAAGG AAACATTTTC CATCAGATAT TGCCACGATA 
    CTGCTGGCAG CAGGTGCATT TGTTCACATT CTAACTGGTA CCTTGCATGA AAAGCTTACT 
    TTAGATGAGT TTCTGGAAAG GCCTCCATTG GATTCCAAAA GTGTGCTATT AAATATTAAG 
    ATTCCAAATT ATGCAGCATC CAAGAACATA TCTTCTGAAA TGGACAGCAA GTTGTTATTC 
    GAAACTTATC GTGCTGCACC GCGACCCCTT GGAAATGCAT TGCCCTATTT AAATGCAGCT 
    TTCTTGTCTG AAGTTTCCTG TTTGAAATCT TCTGGTTCAG CCGTGTTAAA TAAATGCCGG 
    GTCGTTTTTG GTGCTTATGG AACCAAACAT GCTATCAGAG CAAAGGAAGT TGAGAAATTT 
    TTGTCTGGAA AAATACTAAC CATTGGTGTT CTATATGAAG CTGTTAAACT GGTTAAAGCC 
    AATGTGGTTC CTGAAGATGG CACGCCGAGT CCGGCCTTCA GGTCAAGCTT AGCTGCTGGT 
    TATCTCTTTG ACTTTCTCTA CCCCTTGGTA GACATTAACT CTAAAATTTC TGGTGTTTGG 
    TCGGATGAAT ATTGTAATAC TTCATTGTTC AAGGATGCAA AAATAAAACA GAAGTACAGC 
    CAGCTTGATC ATGTTCAATT ACCCACTTTG CTGTCATCAT CAGAGCAGGT GCTTGAATTA 
    AACAATGATC ATCATCCTGT TGGTCAGCCT ACTAAGAAAG TTGGAGCCGC CCTTCAAGCT 
    TCTGGAGAGG CTGTTTTTGT GGATGACATT CCCTCTCCTA CAAATTGTCT ACATGGAGCA 
    TTCATTCATA GCATGAAGCC TTATGCAAGG GTCAAGAATA TCAAATTCAA GTCTAAATTA 
    CTACCAGATG GAGTTTCTGG GCTGATTTCG GTCAGAGACA TTCCAAAAGG TGGGGAGAAC 
    AGAGGTTGCA CGACTAGGTT TGGCACTGAA TCTTTGTTCG CAGATGAGCT TACGCAGTAT 
    GCTGGAGAGC GTCTTGCTTT TGTGGTTGCA GATACACAGA AACATGCTGA TATAGCATCC 
    AACCTTGTTG AAGTTGATTA TGACATTGAA AATCTAGAAC CACCCATTTT AACTGTAGAA 
    GAGGCCATTA AGAGATCTAG CCTTCTCGAG GTTCCTCTTC TCCTCTACCC CAAACAAGTT 
    GGTGATATAT CAAAAGGATT GGCTGAGGCT GATCACAAGA TTCTCTCTGC CAAGATAAAA 
    CTCGGTTCAC AGTACCATTT CTATATGGAG ACTCAAACTG CCCTTGCGCT TCCTGATGAA 
    AACAACTGCA TGGTGGTTTA CAGTTCAACC CAGTGTCCCG AATATGCACA TGTTAACATT 
    GCAAAATGTC TTGGTATTCC TGAGCATAAT GTGCGTGTGA TTACAAGGAG AGTCGGAGGA 
    GGCTTTGGTG GAAAGGCCAT GAAAGCAATT CCTGTTGCTA CAGCATGTGC TCTTGCAGCG 
    CACAAGTTTC GTCGCCCTGT GAGAACGTAT TTGAATCGCA AGACCGATAT GATAATGGCA 
    GGAGGAAGGC ATCCCATGGA AATAACTTAT AATGTAGGAT TTAAATCAAA TGGGAAAGTT 
    ACAGCCTTAC AGCTTGATAT ATTAATCAAT GCTGGAATAT CTTTAGATAT AAGTCCACTG 
    ATGCCAAAAA ACATTCTGAG TGGGCTAAAA AAGTATGACT GGGGTGCTTT ATCTTTTGAT 
    ATAAAGGTAT GCAAAACAAA TCATTCAAGT AAAACTGCAA TGCGAGGCCC TGGGGAGGTA 
    CAAGGATCAT ACATTGCAGA AACCGTAATC GAACATGTAG CGTCTACCCT TTCCATGGAT 
    GTAGATTCTG TGAGAAACAT AAATTTTCAC AGATATGATA GCCTTAAATT ATTCTATGAT 
    GTTGCCTCAG GTGATTCTGT AGAGTATACT CTAACATCAA TATGGAATAA GTTAGCAGAA 
    TCTTCAAGCT TCAAACAAAG GGTTGAAATA ATAAAGGAGT TCAATAGGTG TAAGGTGTGG 
    AAGAAAAGAG GTATTTCTCG AGTGCCTATT GTGCATCAAG TGTTCGTGCG ACCAACTCCG 
    GGGAAAGTAA GCATTCTAAG TGATGGGTCG GTTGTCGTTG AAGTCGGCGG AATAGAGTTG 
    GGTCAAGGGC TCTGGACAAA GGTAAAACAA ATGGCTGCAT TTGCTCTCAG CTCAATCAAA 
    TGTGACGGGG TAGAAAATCT TCTGGACAAA GTAAGGGTAA TACAAGCTGA TACTCTGAGT 
    TTAACTCAAG GAGGAATGAC TGCAGGGAGC ACCACATCAG AGTCAAGCTG TGAATCAGTT 
    AGACTTTGCT GTGCAGTCTT GGTTGAGAGA CTGGGACCTC TAAAGGAAAC GTTGCAGGGG 
    CAAATGGGTT CCGTAACATG GGATGCGCTC ATTTGCAAGG CATATGTGGG ATCACTGAAT 
    TTATCAGCAT CTTCACATTA CATCCCTGAC TTTACTTCGA TGCACTACTT AAACTATGGC 
    GCTGCAGTAA GTGAGGAATA CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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