ORF » Species Summary » Populus trichocarpa » POPTR_0006s12310g cDNA ORF clone

POPTR_0006s12310g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0006s12310g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0006s12310g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa16250 XM_006381312.2
Latest version!		 Populus trichocarpa splicing factor 3A subunit 2 (LOC18100124), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
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OPa16250 XM_006381312.1 Populus trichocarpa hypothetical protein (POPTR_0006s12310g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0006s12310g ( XM_006381312.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006381374.1 Populus trichocarpa splicing factor 3A subunit 2 (LOC18100124), mRNA.
    Price & Availability↑
    CloneID OPa16250
    Clone ID Related Accession (Same CDS sequence) XM_006381312.2 , XM_006381312.1
    Accession Version XM_006381312.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 996bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product splicing factor 3A subunit 2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006381312.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATAGAG AATGGGGTTC TAAGCCAGGC AGCGGAGGCG CCGCCTCCGC CCAGAACGAG 
    GCAATCGACC GCCGTGAGCG TCTCAGACGT CTCGCCCTGG AGACAATCGA TCTAGCAAAA 
    GATCCCTATT TCATGCGCAA CCACCTCGGC AGTTATGAGT GTAAGCTGTG TCTGACTTTG 
    CACAACAATG AAGGAAACTA CTTGGCTCAC ACACAAGGGA AGCGCCATCA GACCAATTTG 
    GCTAAGAGAG CTGCTCGTGA GGCTAAAGAT GCGCCTGCCC TTCCTCAGCC TAACAAGCGC 
    AAAGTTAACA TTCGCAAGAC AGTCAAAATT GGCAGGCCTG GTTACCGGGT GACAAAGCAA 
    TTTGATCCAG AGACAAAGCA GAGGTCTCTT CTCTTCCAGA TTGAATATCC TGAGATAGAG 
    GACAATACAA AGCCTAGGCA TCGATTTATG TCATCTTATG AACAGAGAAT TGAGGCCAAT 
    GATAAGAGGT TTCAATATCT TTTATTTGCA GCGGAACCTT ATGAGATCAT TTCTTTCAAG 
    GTTCCTAGCA CAGAAATTGA CAAGTCTACT CCTAAATTCT TCTCACATTG GGATCCGGAC 
    TCCAAGATGT TCACATTGCA GTTATATTTT AAATTGAAGC CACCAGAGGC GAACAAACCT 
    CAATCTGTTG CTGCAGCCAA TGGCACACTG CCTTCTCAAC CACCACCACC CCCGCCACTG 
    CAAGGACTAG CTGCAGGATC AAGACCCCCG CCACCACCAC TGCCTGCATC ATTACCCCCT 
    CCTCCTCCCA TGGGTAATGG CCCTAGGCCT ATGCCTCCAG GTGGAGCTCC ACCTGCCCCG 
    CCTCCACCTC CTGGTGGCAG TGGTGCAATG GCGAATTTCA CACCTGGCAA TCAGGTGGGT 
    AGACCTCCAA TGCTGCCTCC CCAAGGTTTT CCAGGGCAAC AGATGCAGGG CCAGGTTATG 
    CGTCCACCCC CACCACCTCC CAACATGGGA CAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006381374.1
    CDS68..1063
    Translation

    Target ORF information:

    RefSeq Version XM_006381312.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa splicing factor 3A subunit 2 (LOC18100124), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006381312.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATAGAG AATGGGGTTC TAAGCCAGGC AGCGGAGGCG CCGCCTCCGC CCAGAACGAG 
    GCAATCGACC GCCGTGAGCG TCTCAGACGT CTCGCCCTGG AGACAATCGA TCTAGCAAAA 
    GATCCCTATT TCATGCGCAA CCACCTCGGC AGTTATGAGT GTAAGCTGTG TCTGACTTTG 
    CACAACAATG AAGGAAACTA CTTGGCTCAC ACACAAGGGA AGCGCCATCA GACCAATTTG 
    GCTAAGAGAG CTGCTCGTGA GGCTAAAGAT GCGCCTGCCC TTCCTCAGCC TAACAAGCGC 
    AAAGTTAACA TTCGCAAGAC AGTCAAAATT GGCAGGCCTG GTTACCGGGT GACAAAGCAA 
    TTTGATCCAG AGACAAAGCA GAGGTCTCTT CTCTTCCAGA TTGAATATCC TGAGATAGAG 
    GACAATACAA AGCCTAGGCA TCGATTTATG TCATCTTATG AACAGAGAAT TGAGGCCAAT 
    GATAAGAGGT TTCAATATCT TTTATTTGCA GCGGAACCTT ATGAGATCAT TTCTTTCAAG 
    GTTCCTAGCA CAGAAATTGA CAAGTCTACT CCTAAATTCT TCTCACATTG GGATCCGGAC 
    TCCAAGATGT TCACATTGCA GTTATATTTT AAATTGAAGC CACCAGAGGC GAACAAACCT 
    CAATCTGTTG CTGCAGCCAA TGGCACACTG CCTTCTCAAC CACCACCACC CCCGCCACTG 
    CAAGGACTAG CTGCAGGATC AAGACCCCCG CCACCACCAC TGCCTGCATC ATTACCCCCT 
    CCTCCTCCCA TGGGTAATGG CCCTAGGCCT ATGCCTCCAG GTGGAGCTCC ACCTGCCCCG 
    CCTCCACCTC CTGGTGGCAG TGGTGCAATG GCGAATTTCA CACCTGGCAA TCAGGTGGGT 
    AGACCTCCAA TGCTGCCTCC CCAAGGTTTT CCAGGGCAAC AGATGCAGGG CCAGGTTATG 
    CGTCCACCCC CACCACCTCC CAACATGGGA CAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0006s12310g ( XM_006381312.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006381374.1 Populus trichocarpa hypothetical protein (POPTR_0006s12310g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa16250
    Clone ID Related Accession (Same CDS sequence) XM_006381312.2 , XM_006381312.1
    Accession Version XM_006381312.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 996bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008472). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATAGAG AATGGGGTTC TAAGCCAGGC AGCGGAGGCG CCGCCTCCGC CCAGAACGAG 
    GCAATCGACC GCCGTGAGCG TCTCAGACGT CTCGCCCTGG AGACAATCGA TCTAGCAAAA 
    GATCCCTATT TCATGCGCAA CCACCTCGGC AGTTATGAGT GTAAGCTGTG TCTGACTTTG 
    CACAACAATG AAGGAAACTA CTTGGCTCAC ACACAAGGGA AGCGCCATCA GACCAATTTG 
    GCTAAGAGAG CTGCTCGTGA GGCTAAAGAT GCGCCTGCCC TTCCTCAGCC TAACAAGCGC 
    AAAGTTAACA TTCGCAAGAC AGTCAAAATT GGCAGGCCTG GTTACCGGGT GACAAAGCAA 
    TTTGATCCAG AGACAAAGCA GAGGTCTCTT CTCTTCCAGA TTGAATATCC TGAGATAGAG 
    GACAATACAA AGCCTAGGCA TCGATTTATG TCATCTTATG AACAGAGAAT TGAGGCCAAT 
    GATAAGAGGT TTCAATATCT TTTATTTGCA GCGGAACCTT ATGAGATCAT TTCTTTCAAG 
    GTTCCTAGCA CAGAAATTGA CAAGTCTACT CCTAAATTCT TCTCACATTG GGATCCGGAC 
    TCCAAGATGT TCACATTGCA GTTATATTTT AAATTGAAGC CACCAGAGGC GAACAAACCT 
    CAATCTGTTG CTGCAGCCAA TGGCACACTG CCTTCTCAAC CACCACCACC CCCGCCACTG 
    CAAGGACTAG CTGCAGGATC AAGACCCCCG CCACCACCAC TGCCTGCATC ATTACCCCCT 
    CCTCCTCCCA TGGGTAATGG CCCTAGGCCT ATGCCTCCAG GTGGAGCTCC ACCTGCCCCG 
    CCTCCACCTC CTGGTGGCAG TGGTGCAATG GCGAATTTCA CACCTGGCAA TCAGGTGGGT 
    AGACCTCCAA TGCTGCCTCC CCAAGGTTTT CCAGGGCAAC AGATGCAGGG CCAGGTTATG 
    CGTCCACCCC CACCACCTCC CAACATGGGA CAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006381374.1
    CDS57..1052
    Translation

    Target ORF information:

    RefSeq Version XM_006381312.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0006s12310g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006381312.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATAGAG AATGGGGTTC TAAGCCAGGC AGCGGAGGCG CCGCCTCCGC CCAGAACGAG 
    GCAATCGACC GCCGTGAGCG TCTCAGACGT CTCGCCCTGG AGACAATCGA TCTAGCAAAA 
    GATCCCTATT TCATGCGCAA CCACCTCGGC AGTTATGAGT GTAAGCTGTG TCTGACTTTG 
    CACAACAATG AAGGAAACTA CTTGGCTCAC ACACAAGGGA AGCGCCATCA GACCAATTTG 
    GCTAAGAGAG CTGCTCGTGA GGCTAAAGAT GCGCCTGCCC TTCCTCAGCC TAACAAGCGC 
    AAAGTTAACA TTCGCAAGAC AGTCAAAATT GGCAGGCCTG GTTACCGGGT GACAAAGCAA 
    TTTGATCCAG AGACAAAGCA GAGGTCTCTT CTCTTCCAGA TTGAATATCC TGAGATAGAG 
    GACAATACAA AGCCTAGGCA TCGATTTATG TCATCTTATG AACAGAGAAT TGAGGCCAAT 
    GATAAGAGGT TTCAATATCT TTTATTTGCA GCGGAACCTT ATGAGATCAT TTCTTTCAAG 
    GTTCCTAGCA CAGAAATTGA CAAGTCTACT CCTAAATTCT TCTCACATTG GGATCCGGAC 
    TCCAAGATGT TCACATTGCA GTTATATTTT AAATTGAAGC CACCAGAGGC GAACAAACCT 
    CAATCTGTTG CTGCAGCCAA TGGCACACTG CCTTCTCAAC CACCACCACC CCCGCCACTG 
    CAAGGACTAG CTGCAGGATC AAGACCCCCG CCACCACCAC TGCCTGCATC ATTACCCCCT 
    CCTCCTCCCA TGGGTAATGG CCCTAGGCCT ATGCCTCCAG GTGGAGCTCC ACCTGCCCCG 
    CCTCCACCTC CTGGTGGCAG TGGTGCAATG GCGAATTTCA CACCTGGCAA TCAGGTGGGT 
    AGACCTCCAA TGCTGCCTCC CCAAGGTTTT CCAGGGCAAC AGATGCAGGG CCAGGTTATG 
    CGTCCACCCC CACCACCTCC CAACATGGGA CAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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