ORF » Species Summary » Populus trichocarpa » LOC18099405 cDNA ORF clone

LOC18099405 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18099405 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18099405 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa13868 XM_006383287.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0005s14730g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa446199 XM_024588552.1
Latest version!		 Populus trichocarpa methionyl-tRNA formyltransferase (LOC18099405), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18099405 ( XM_006383287.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006383349.1 Populus trichocarpa hypothetical protein (POPTR_0005s14730g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa13868
    Clone ID Related Accession (Same CDS sequence) XM_006383287.1
    Accession Version XM_006383287.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 561bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGTTAATTT TTAACTTGAC TTGTAATTCC TTCTTCCAGA GCGTTTTAAG ACTATCTTGT 
    TCATGCTTGC AGGCTCCAGA TTTACTTGCA TTGCTATTTT TGGAAGGATC TAAACTTTTG 
    ATTCATGAGC TCCCTTCTAT ACTTCACGGA TCAGCCAGGT TAAAAGCTCA ACCCCAAGAT 
    GATTCCAAAG CTACCTTGGC TCCAAAGATA TCTGTTGAGG AGTCATGGTT ATCCTTTGAT 
    CAAGAAGCTT CAGTCCTCCA TAATAAGGTT CGTGCATTTG CAGGGTGGCC AGGGACACGG 
    GCTAAAGTAG CAATTGTTGA CGATGAAAAT GATCGCCGCA ATATTGTAGA ACTTAAGATT 
    ATTACTACAA GAGTTTGCGA CCGTAGCATT GTTCAGGGTG ATGAAGCGGA TGACATCACT 
    TATGTGAAGG ATTCGTTGGT GTTTCCATGT GGAAGGTCTA CAGCGCTTGA GGTATTGGAA 
    CTCCAGCTTC CTGGGAAAAA GGTTTTTCGT GCAGCTGCCT TTTGGAATGG TTTGCGTGGT 
    CAAAAGCTGA AGAAACTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006383349.1
    CDS350..910
    Translation

    Target ORF information:

    RefSeq Version XM_006383287.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0005s14730g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006383287.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    ATGTTAATTT TTAACTTGAC TTGTAATTCC TTCTTCCAGA GCGTTTTAAG ACTATCTTGT 
    TCATGCTTGC AGGCTCCAGA TTTACTTGCA TTGCTATTTT TGGAAGGATC TAAACTTTTG 
    ATTCATGAGC TCCCTTCTAT ACTTCACGGA TCAGCCAGGT TAAAAGCTCA ACCCCAAGAT 
    GATTCCAAAG CTACCTTGGC TCCAAAGATA TCTGTTGAGG AGTCATGGTT ATCCTTTGAT 
    CAAGAAGCTT CAGTCCTCCA TAATAAGGTT CGTGCATTTG CAGGGTGGCC AGGGACACGG 
    GCTAAAGTAG CAATTGTTGA CGATGAAAAT GATCGCCGCA ATATTGTAGA ACTTAAGATT 
    ATTACTACAA GAGTTTGCGA CCGTAGCATT GTTCAGGGTG ATGAAGCGGA TGACATCACT 
    TATGTGAAGG ATTCGTTGGT GTTTCCATGT GGAAGGTCTA CAGCGCTTGA GGTATTGGAA 
    CTCCAGCTTC CTGGGAAAAA GGTTTTTCGT GCAGCTGCCT TTTGGAATGG TTTGCGTGGT 
    CAAAAGCTGA AGAAACTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18099405 ( XM_024588552.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024444320.1 Populus trichocarpa methionyl-tRNA formyltransferase (LOC18099405), mRNA.
    Price & Availability↑
    CloneID OPa446199
    Clone ID Related Accession (Same CDS sequence) XM_024588552.1
    Accession Version XM_024588552.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1080bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product uncharacterized protein LOC18099405
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037301.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

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    121
    181
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    301
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    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGAATTCTT CATTAATGCT ACGCCGTTTC TTCTGTTTCA ACTCAACAAG AACTGCAGTA 
    ACAGCAGCAT CTTCTACTTC TTCAAAGAAG AAACCCCTTG TCTTCTTGGG TTCTCCTCAG 
    GTGGCTGCTA CTGTTCTTGA TGCTCTTTTC AATGCATCTA AAGCACCCAA TTCTCTCTTT 
    GAGGTACTTC ATGTTTTTGT TTTGTTATTA GGTGGCAGCT ATAAAAAGTT AATGCCTTCA 
    CCAGTTGCTG AGTTTGCTCT TGATACAGGC TTCCCTTCTG ATCTTATTTT CACACCTGAA 
    AGAGCTGGAG AGGATACATT TTTGTCCACT CTAAGAGCAT TGCAGCCTGA ACTTTGCATT 
    ACAGCAGCAT ATGGGAATAT CTTACCAACC AAGTTTCTCA ATATTCCACC AATGGGGACG 
    GTCAATATAC ACCCAAGTCT TCTGCCACTT TACCGTGGTG CTGCTCCTGT TCAAAGAGCA 
    TTGCAGGATG GTGCTAAGGA AACTGGGGTA TCATTAGCTT TCACTGTTCG TGCTCTCGAT 
    GCTGGACCTG TAATTGCCTA TGAAACTCTG GAAGTTGATG ATCAAATTAA GGCTCCAGAT 
    TTACTTGCAT TGCTATTTTT GGAAGGATCT AAACTTTTGA TTCATGAGCT CCCTTCTATA 
    CTTCACGGAT CAGCCAGGTT AAAAGCTCAA CCCCAAGATG ATTCCAAAGC TACCTTGGCT 
    CCAAAGATAT CTGTTGAGGA GTCATGGTTA TCCTTTGATC AAGAAGCTTC AGTCCTCCAT 
    AATAAGGTTC GTGCATTTGC AGGGTGGCCA GGGACACGGG CTAAAGTAGC AATTGTTGAC 
    GATGAAAATG ATCGCCGCAA TATTGTAGAA CTTAAGATTA TTACTACAAG AGTTTGCGAC 
    CGTAGCATTG TTCAGGGTGA TGAAGCGGAT GACATCACTT ATGTGAAGGA TTCGTTGGTG 
    TTTCCATGTG GAAGGTCTAC AGCGCTTGAG GTATTGGAAC TCCAGCTTCC TGGGAAAAAG 
    GTTTTTCGTG CAGCTGCCTT TTGGAATGGT TTGCGTGGTC AAAAGCTGAA GAAACTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024444320.1
    CDS115..1194
    Translation

    Target ORF information:

    RefSeq Version XM_024588552.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa methionyl-tRNA formyltransferase (LOC18099405), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024588552.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGAATTCTT CATTAATGCT ACGCCGTTTC TTCTGTTTCA ACTCAACAAG AACTGCAGTA 
    ACAGCAGCAT CTTCTACTTC TTCAAAGAAG AAACCCCTTG TCTTCTTGGG TTCTCCTCAG 
    GTGGCTGCTA CTGTTCTTGA TGCTCTTTTC AATGCATCTA AAGCACCCAA TTCTCTCTTT 
    GAGGTACTTC ATGTTTTTGT TTTGTTATTA GGTGGCAGCT ATAAAAAGTT AATGCCTTCA 
    CCAGTTGCTG AGTTTGCTCT TGATACAGGC TTCCCTTCTG ATCTTATTTT CACACCTGAA 
    AGAGCTGGAG AGGATACATT TTTGTCCACT CTAAGAGCAT TGCAGCCTGA ACTTTGCATT 
    ACAGCAGCAT ATGGGAATAT CTTACCAACC AAGTTTCTCA ATATTCCACC AATGGGGACG 
    GTCAATATAC ACCCAAGTCT TCTGCCACTT TACCGTGGTG CTGCTCCTGT TCAAAGAGCA 
    TTGCAGGATG GTGCTAAGGA AACTGGGGTA TCATTAGCTT TCACTGTTCG TGCTCTCGAT 
    GCTGGACCTG TAATTGCCTA TGAAACTCTG GAAGTTGATG ATCAAATTAA GGCTCCAGAT 
    TTACTTGCAT TGCTATTTTT GGAAGGATCT AAACTTTTGA TTCATGAGCT CCCTTCTATA 
    CTTCACGGAT CAGCCAGGTT AAAAGCTCAA CCCCAAGATG ATTCCAAAGC TACCTTGGCT 
    CCAAAGATAT CTGTTGAGGA GTCATGGTTA TCCTTTGATC AAGAAGCTTC AGTCCTCCAT 
    AATAAGGTTC GTGCATTTGC AGGGTGGCCA GGGACACGGG CTAAAGTAGC AATTGTTGAC 
    GATGAAAATG ATCGCCGCAA TATTGTAGAA CTTAAGATTA TTACTACAAG AGTTTGCGAC 
    CGTAGCATTG TTCAGGGTGA TGAAGCGGAT GACATCACTT ATGTGAAGGA TTCGTTGGTG 
    TTTCCATGTG GAAGGTCTAC AGCGCTTGAG GTATTGGAAC TCCAGCTTCC TGGGAAAAAG 
    GTTTTTCGTG CAGCTGCCTT TTGGAATGGT TTGCGTGGTC AAAAGCTGAA GAAACTGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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