ORF » Species Summary » Populus trichocarpa » LOC18098088 cDNA ORF clone

LOC18098088 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18098088 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18098088 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa11149 XM_006384712.2
Latest version!		 Populus trichocarpa bifunctional nitrilase/nitrile hydratase NIT4A (LOC18098088), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa11149 XM_006384712.1 Populus trichocarpa NIT4 family protein (POPTR_0004s20980g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18098088 ( XM_006384712.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006384774.1 Populus trichocarpa NIT4 family protein (POPTR_0004s20980g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa11149
    Clone ID Related Accession (Same CDS sequence) XM_006384712.1 , XM_006384712.2
    Accession Version XM_006384712.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1134bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product NIT4 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008470). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCAAGCAA CTGTACCAGT TTCATCATCA CTTCATACAA CAAGTACAGC AGCAGACCCA 
    ACAGCGCTCT CCACACAGAC CAACAACATG GCTCTTGTCC CTGCCCCACC ATCAGAAACC 
    CCACTTTTTG CAGAAGTAGA CATGTGTTCC GATTCTTCAG CAACGACTGT CCGTGCCACT 
    GTTATCCAAG CCTCCACTGT CTTCTATGAC ACTCCTGCCA CTCTAGATAA GGCTGAGAGA 
    TTTCTGGCTG AAGCAGCTGG ATATGGGTCT CAATTGGTTG TGTTTCCTGA AGCATTTATT 
    GGTGGTTATC CTAGAGGATC AAGTTTTGGT GCTACCATTG GTAGTCGTAC AGCTAAAGGT 
    AGAGAGGATT TCAGAAAGTA TCATGCTTCA GCCATTGATG TTCCTGGTCC AGAAGTTGAC 
    CGTTTGGCTG CAATGGCTGG GAAGTATAAG GTGTATTTGG TGATGGGTGT GATTGAGAGG 
    GAGGGATATA CACTCTACTG TACCGTGTTG TTTTTTGATT CTCAAGGTCA TTACATGGGG 
    AAGCATAGGA AAGTTATGCC GACGGCGGTG GAGCGTATAG TATGGGGTTT TGGAGATGGA 
    TCAACGATTC CGGTTTTTGG GACTCCGATT GGGAAAATTG GTGCCGCTAT CTGTTGGGAA 
    AATAGAATGC CACTCCTAAG GACTGCAATG TATGGTAAAG GTATTGAAAT ATATTGTGCA 
    CCAACAGCTG ATTCCAGGGA TACTTGGCAA GCAACGATGA CCCACATTGC TCTTGAGGGA 
    GGATGTTTTG TACTATCTGC CAACCAGTTT TGCCGGAGGA AGGATTACCC ACCTCCCCCA 
    GAGTATGTCT TTTTGGGCGT GGAAGAAGAC CTCACACCCG ATTCTGTTGT CTGTGCTGGA 
    GGCAGTGTTA TTATATCACC ATTGGGAACT GTTTTGGCTG GACCCAATTA TGATGGGGAG 
    GCACTGATTT CTGCAGATCT AGATCTTGGA GAAATAGCTA GGGCAAAATT TGACTTTGAT 
    GTGGTTGGAC ATTACTCAAG ACCTGAAGTT CTCAGCTTGA CTGTGAGGGA CCATCCAACA 
    AATGCAGTTA TGTTCACATC AGAATCAGCA AAAACTGAAG CCTCTCGTAA ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006384774.1
    CDS68..1201
    Translation

    Target ORF information:

    RefSeq Version XM_006384712.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa NIT4 family protein (POPTR_0004s20980g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006384712.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCAAGCAA CTGTACCAGT TTCATCATCA CTTCATACAA CAAGTACAGC AGCAGACCCA 
    ACAGCGCTCT CCACACAGAC CAACAACATG GCTCTTGTCC CTGCCCCACC ATCAGAAACC 
    CCACTTTTTG CAGAAGTAGA CATGTGTTCC GATTCTTCAG CAACGACTGT CCGTGCCACT 
    GTTATCCAAG CCTCCACTGT CTTCTATGAC ACTCCTGCCA CTCTAGATAA GGCTGAGAGA 
    TTTCTGGCTG AAGCAGCTGG ATATGGGTCT CAATTGGTTG TGTTTCCTGA AGCATTTATT 
    GGTGGTTATC CTAGAGGATC AAGTTTTGGT GCTACCATTG GTAGTCGTAC AGCTAAAGGT 
    AGAGAGGATT TCAGAAAGTA TCATGCTTCA GCCATTGATG TTCCTGGTCC AGAAGTTGAC 
    CGTTTGGCTG CAATGGCTGG GAAGTATAAG GTGTATTTGG TGATGGGTGT GATTGAGAGG 
    GAGGGATATA CACTCTACTG TACCGTGTTG TTTTTTGATT CTCAAGGTCA TTACATGGGG 
    AAGCATAGGA AAGTTATGCC GACGGCGGTG GAGCGTATAG TATGGGGTTT TGGAGATGGA 
    TCAACGATTC CGGTTTTTGG GACTCCGATT GGGAAAATTG GTGCCGCTAT CTGTTGGGAA 
    AATAGAATGC CACTCCTAAG GACTGCAATG TATGGTAAAG GTATTGAAAT ATATTGTGCA 
    CCAACAGCTG ATTCCAGGGA TACTTGGCAA GCAACGATGA CCCACATTGC TCTTGAGGGA 
    GGATGTTTTG TACTATCTGC CAACCAGTTT TGCCGGAGGA AGGATTACCC ACCTCCCCCA 
    GAGTATGTCT TTTTGGGCGT GGAAGAAGAC CTCACACCCG ATTCTGTTGT CTGTGCTGGA 
    GGCAGTGTTA TTATATCACC ATTGGGAACT GTTTTGGCTG GACCCAATTA TGATGGGGAG 
    GCACTGATTT CTGCAGATCT AGATCTTGGA GAAATAGCTA GGGCAAAATT TGACTTTGAT 
    GTGGTTGGAC ATTACTCAAG ACCTGAAGTT CTCAGCTTGA CTGTGAGGGA CCATCCAACA 
    AATGCAGTTA TGTTCACATC AGAATCAGCA AAAACTGAAG CCTCTCGTAA ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18098088 ( XM_006384712.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006384774.1 Populus trichocarpa bifunctional nitrilase/nitrile hydratase NIT4A (LOC18098088), mRNA.
    Price & Availability↑
    CloneID OPa11149
    Clone ID Related Accession (Same CDS sequence) XM_006384712.1 , XM_006384712.2
    Accession Version XM_006384712.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1134bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product bifunctional nitrilase/nitrile hydratase NIT4A
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037288.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006384712.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCAAGCAA CTGTACCAGT TTCATCATCA CTTCATACAA CAAGTACAGC AGCAGACCCA 
    ACAGCGCTCT CCACACAGAC CAACAACATG GCTCTTGTCC CTGCCCCACC ATCAGAAACC 
    CCACTTTTTG CAGAAGTAGA CATGTGTTCC GATTCTTCAG CAACGACTGT CCGTGCCACT 
    GTTATCCAAG CCTCCACTGT CTTCTATGAC ACTCCTGCCA CTCTAGATAA GGCTGAGAGA 
    TTTCTGGCTG AAGCAGCTGG ATATGGGTCT CAATTGGTTG TGTTTCCTGA AGCATTTATT 
    GGTGGTTATC CTAGAGGATC AAGTTTTGGT GCTACCATTG GTAGTCGTAC AGCTAAAGGT 
    AGAGAGGATT TCAGAAAGTA TCATGCTTCA GCCATTGATG TTCCTGGTCC AGAAGTTGAC 
    CGTTTGGCTG CAATGGCTGG GAAGTATAAG GTGTATTTGG TGATGGGTGT GATTGAGAGG 
    GAGGGATATA CACTCTACTG TACCGTGTTG TTTTTTGATT CTCAAGGTCA TTACATGGGG 
    AAGCATAGGA AAGTTATGCC GACGGCGGTG GAGCGTATAG TATGGGGTTT TGGAGATGGA 
    TCAACGATTC CGGTTTTTGG GACTCCGATT GGGAAAATTG GTGCCGCTAT CTGTTGGGAA 
    AATAGAATGC CACTCCTAAG GACTGCAATG TATGGTAAAG GTATTGAAAT ATATTGTGCA 
    CCAACAGCTG ATTCCAGGGA TACTTGGCAA GCAACGATGA CCCACATTGC TCTTGAGGGA 
    GGATGTTTTG TACTATCTGC CAACCAGTTT TGCCGGAGGA AGGATTACCC ACCTCCCCCA 
    GAGTATGTCT TTTTGGGCGT GGAAGAAGAC CTCACACCCG ATTCTGTTGT CTGTGCTGGA 
    GGCAGTGTTA TTATATCACC ATTGGGAACT GTTTTGGCTG GACCCAATTA TGATGGGGAG 
    GCACTGATTT CTGCAGATCT AGATCTTGGA GAAATAGCTA GGGCAAAATT TGACTTTGAT 
    GTGGTTGGAC ATTACTCAAG ACCTGAAGTT CTCAGCTTGA CTGTGAGGGA CCATCCAACA 
    AATGCAGTTA TGTTCACATC AGAATCAGCA AAAACTGAAG CCTCTCGTAA ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006384774.1
    CDS153..1286
    Translation

    Target ORF information:

    RefSeq Version XM_006384712.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa bifunctional nitrilase/nitrile hydratase NIT4A (LOC18098088), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006384712.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCAAGCAA CTGTACCAGT TTCATCATCA CTTCATACAA CAAGTACAGC AGCAGACCCA 
    ACAGCGCTCT CCACACAGAC CAACAACATG GCTCTTGTCC CTGCCCCACC ATCAGAAACC 
    CCACTTTTTG CAGAAGTAGA CATGTGTTCC GATTCTTCAG CAACGACTGT CCGTGCCACT 
    GTTATCCAAG CCTCCACTGT CTTCTATGAC ACTCCTGCCA CTCTAGATAA GGCTGAGAGA 
    TTTCTGGCTG AAGCAGCTGG ATATGGGTCT CAATTGGTTG TGTTTCCTGA AGCATTTATT 
    GGTGGTTATC CTAGAGGATC AAGTTTTGGT GCTACCATTG GTAGTCGTAC AGCTAAAGGT 
    AGAGAGGATT TCAGAAAGTA TCATGCTTCA GCCATTGATG TTCCTGGTCC AGAAGTTGAC 
    CGTTTGGCTG CAATGGCTGG GAAGTATAAG GTGTATTTGG TGATGGGTGT GATTGAGAGG 
    GAGGGATATA CACTCTACTG TACCGTGTTG TTTTTTGATT CTCAAGGTCA TTACATGGGG 
    AAGCATAGGA AAGTTATGCC GACGGCGGTG GAGCGTATAG TATGGGGTTT TGGAGATGGA 
    TCAACGATTC CGGTTTTTGG GACTCCGATT GGGAAAATTG GTGCCGCTAT CTGTTGGGAA 
    AATAGAATGC CACTCCTAAG GACTGCAATG TATGGTAAAG GTATTGAAAT ATATTGTGCA 
    CCAACAGCTG ATTCCAGGGA TACTTGGCAA GCAACGATGA CCCACATTGC TCTTGAGGGA 
    GGATGTTTTG TACTATCTGC CAACCAGTTT TGCCGGAGGA AGGATTACCC ACCTCCCCCA 
    GAGTATGTCT TTTTGGGCGT GGAAGAAGAC CTCACACCCG ATTCTGTTGT CTGTGCTGGA 
    GGCAGTGTTA TTATATCACC ATTGGGAACT GTTTTGGCTG GACCCAATTA TGATGGGGAG 
    GCACTGATTT CTGCAGATCT AGATCTTGGA GAAATAGCTA GGGCAAAATT TGACTTTGAT 
    GTGGTTGGAC ATTACTCAAG ACCTGAAGTT CTCAGCTTGA CTGTGAGGGA CCATCCAACA 
    AATGCAGTTA TGTTCACATC AGAATCAGCA AAAACTGAAG CCTCTCGTAA ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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