ORF » Species Summary » Populus trichocarpa » POPTR_0004s10900g cDNA ORF clone

POPTR_0004s10900g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0004s10900g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0004s10900g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa10757 XM_006384173.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0004s10900g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa418798 XM_024592086.1
Latest version!		 Populus trichocarpa beta-glucosidase 12 (LOC18097640), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0004s10900g ( XM_006384173.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006384235.1 Populus trichocarpa hypothetical protein (POPTR_0004s10900g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa10757
    Clone ID Related Accession (Same CDS sequence) XM_006384173.1
    Accession Version XM_006384173.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1560bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008470). COMPLETENESS: incomplete on the 3' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGGAAGCA TTGATGACTT CAGCCGTAAT TCTTTCCCAG ATGATTTTGT TTTCGGAACA 
    TCCTCATCAG CTTACCAGTA TGAAGGTGAA ACAAACAAAC ATGGTAGAGG ACCAGCTATA 
    TGGGACACTT TCACTGTGGA ACATACAGAG AGAATAAATG ATCATAGCAA CGGAAATGTA 
    GCTGTTGATT TCTATCATCG CTATAAGGAA GACGTGCAAA GAATGAAAGA AATGGGAATG 
    GATGCTTTCA GATTCTCCAT TTCTTGGTCT AGAGTATTAC CACATGGCAG GTTAAGTGCT 
    GGAGTAAACG AAGAAGGCAT CAAATTTTAT AACGATCTCA TTGATGACCT CCTTAAGAAT 
    GGTTTGCAGC CTTACGTTAC TCTCTTTCAC TGGGATACTC CACAAGCTTT GGAAGATAAA 
    TATGGTGGTT TCTTAAGTCC TAACATTGTA AATGATTTCC GAGACTTTGT CGACCTTTGT 
    TTCCAAAATT TTGGAGACCG GGTGAAGAAG TGGATTACTT TGAACGAGCC ATGGATGTTC 
    AGTGTTCAAG GTTATGACAT GGGCACGATG GCACCCGGTA GGATTTCTGT CGTTGTAAAT 
    GATCCACACC GATCCTTAAA CACTGGTGCC ACTGAAGTGT ATACGGTTAG CCATCATTTG 
    TTGCTTGCTC ATGCTGCGGC AGTGAAACTA TACAAGGAAA AATATCAGTC ATGTCAAGGT 
    GGACAGATTG GGATAACGCT TGTTTCTCAT TGGTTTGAAC CTTACTCAAA CAGTGAAGCT 
    GATCAAAATG CAACCAAAAG AAGCCTCGAC TTCATGCTTG GTTGGTTCAT GGATCCTTTA 
    ACTAATGGTG ACTATCCACG TAACATGCAT GATTTTGTTG GTGGAAGATT GCCCGAGTTC 
    ACTGCCGAGG AATCTAAGAT GTTGAAGGGA TCGTATGATT TTATTGGAAT TAATTACTAC 
    ACAACATATT ATGCTCAAAA TATCGATGCA AATTATCAGA GTGTTGGATT CATGTCAGAT 
    GCTCGTGCTA ATTGGACAGG AGAGAGAAAT GGAATCCCAA TAGGTCCACA GGCTGGTGTA 
    AAATGGCTTT ATATTTATCC CGAAGGCATC AGCAGGCTTT TGAATTACAC CAAAGATCTA 
    TACGGGAGCC CAACAATTTA CATTACTGAG AATGGGGTTG ATGACGTAAA TAACAATGCT 
    TCATCACTAA AGGAAGCTCT TAATGATCCC ATAAGAGAAA AATCTTACAA AGACCACCTC 
    AAGAATGTTT TGAGATCCAT CAATGAGCAT GGTGTTGATG TTAAGGGATT TTTTGCTTGG 
    TCTTTAATGG ACAATTTCGA ATGGGGAAGT GGTTATGCTG TGAGGTTCGG CCTCTACTAT 
    GTTGATTACA AAAATGATTT GAAACGATAT CCTAAACAAT CAGTCAAGTG GTTCAAGCAG 
    TTTCTTAGAA GAGACTCCCA CAGTCCTATT CCACATACGT ATCCTCTGAT TACTTCTAAT 
    GAAACGTCGA AAATTGAAGA TAGTTTGGTT CGGGATGCTA AAAGGCCAAG AAATGCCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006384235.1
    CDS202..1761
    Translation

    Target ORF information:

    RefSeq Version XM_006384173.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0004s10900g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006384173.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGGAAGCA TTGATGACTT CAGCCGTAAT TCTTTCCCAG ATGATTTTGT TTTCGGAACA 
    TCCTCATCAG CTTACCAGTA TGAAGGTGAA ACAAACAAAC ATGGTAGAGG ACCAGCTATA 
    TGGGACACTT TCACTGTGGA ACATACAGAG AGAATAAATG ATCATAGCAA CGGAAATGTA 
    GCTGTTGATT TCTATCATCG CTATAAGGAA GACGTGCAAA GAATGAAAGA AATGGGAATG 
    GATGCTTTCA GATTCTCCAT TTCTTGGTCT AGAGTATTAC CACATGGCAG GTTAAGTGCT 
    GGAGTAAACG AAGAAGGCAT CAAATTTTAT AACGATCTCA TTGATGACCT CCTTAAGAAT 
    GGTTTGCAGC CTTACGTTAC TCTCTTTCAC TGGGATACTC CACAAGCTTT GGAAGATAAA 
    TATGGTGGTT TCTTAAGTCC TAACATTGTA AATGATTTCC GAGACTTTGT CGACCTTTGT 
    TTCCAAAATT TTGGAGACCG GGTGAAGAAG TGGATTACTT TGAACGAGCC ATGGATGTTC 
    AGTGTTCAAG GTTATGACAT GGGCACGATG GCACCCGGTA GGATTTCTGT CGTTGTAAAT 
    GATCCACACC GATCCTTAAA CACTGGTGCC ACTGAAGTGT ATACGGTTAG CCATCATTTG 
    TTGCTTGCTC ATGCTGCGGC AGTGAAACTA TACAAGGAAA AATATCAGTC ATGTCAAGGT 
    GGACAGATTG GGATAACGCT TGTTTCTCAT TGGTTTGAAC CTTACTCAAA CAGTGAAGCT 
    GATCAAAATG CAACCAAAAG AAGCCTCGAC TTCATGCTTG GTTGGTTCAT GGATCCTTTA 
    ACTAATGGTG ACTATCCACG TAACATGCAT GATTTTGTTG GTGGAAGATT GCCCGAGTTC 
    ACTGCCGAGG AATCTAAGAT GTTGAAGGGA TCGTATGATT TTATTGGAAT TAATTACTAC 
    ACAACATATT ATGCTCAAAA TATCGATGCA AATTATCAGA GTGTTGGATT CATGTCAGAT 
    GCTCGTGCTA ATTGGACAGG AGAGAGAAAT GGAATCCCAA TAGGTCCACA GGCTGGTGTA 
    AAATGGCTTT ATATTTATCC CGAAGGCATC AGCAGGCTTT TGAATTACAC CAAAGATCTA 
    TACGGGAGCC CAACAATTTA CATTACTGAG AATGGGGTTG ATGACGTAAA TAACAATGCT 
    TCATCACTAA AGGAAGCTCT TAATGATCCC ATAAGAGAAA AATCTTACAA AGACCACCTC 
    AAGAATGTTT TGAGATCCAT CAATGAGCAT GGTGTTGATG TTAAGGGATT TTTTGCTTGG 
    TCTTTAATGG ACAATTTCGA ATGGGGAAGT GGTTATGCTG TGAGGTTCGG CCTCTACTAT 
    GTTGATTACA AAAATGATTT GAAACGATAT CCTAAACAAT CAGTCAAGTG GTTCAAGCAG 
    TTTCTTAGAA GAGACTCCCA CAGTCCTATT CCACATACGT ATCCTCTGAT TACTTCTAAT 
    GAAACGTCGA AAATTGAAGA TAGTTTGGTT CGGGATGCTA AAAGGCCAAG AAATGCCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0004s10900g ( XM_024592086.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024447854.1 Populus trichocarpa beta-glucosidase 12 (LOC18097640), mRNA.
    Price & Availability↑
    CloneID OPa418798
    Clone ID Related Accession (Same CDS sequence) XM_024592086.1
    Accession Version XM_024592086.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1560bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product beta-glucosidase 12
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020167876.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGGAAGCA TTGATGACTT CAGCCGTAAT TCTTTCCCAG ATGATTTTGT ATTCGGAACA 
    TCCTCATCAG CTTACCAGTA TGAAGGTGAA ACAAACAAAC ATGGTAGAGG ACCAGCTATA 
    TGGGACACTT TCACTGTGGA ACATACAGAG AGAATAAATG ATCATAGCAA CGGAAATGTA 
    GCTGTTGATT TCTATCATCG CTATAAGGAA GATGTGCAAA GAATGAAAGA AATGGGAATG 
    GATGCTTTCA GATTCTCCAT TTCTTGGTCT AGAGTATTAC CACATGGCAG GTTAAGTGCT 
    GGAGTAAACG AAGAAGGCAT CAAATTTTAT AACGATCTCA TTGATGACCT CCTTAAGAAT 
    GGTTTGCAGC CTTACGTTAC TCTCTTTCAC TGGGATACTC CACAAGCTTT GGAAGATAAA 
    TATGGTGGTT TCTTAAGTCC TAACATTGTA AATGATTTCC GAGACTTTGT CGACCTTTGT 
    TTCCAAAATT TTGGAGACCG GGTGAAGAAG TGGATTACTT TGAACGAGCC ATGGATGTTC 
    AGTGTTCAAG GTTATGACAT GGGCACGATG GCACCCGGTA GGATTTCTGT CGTTGTAAAT 
    GATCCACACC GATCCTTAAA CACCGGTGCC ACTGAAGTGT ATATGGTTAG CCATCATTTG 
    TTGCTTGCTC ATGCTGCGGC AGTGAAACTA TACAAGGAAA AATATCAGTC ATGTCAAGGT 
    GGACAGATTG GGATAACACT TGTTTCTCAT TGGTTTGAAC CTTACTCAAA CAGTGAAGCA 
    GATCAAAATG CAACCAAAAG AAGCCTCGAC TTCATGCTTG GTTGGTTCAT GGATCCTTTA 
    ACTAATGGTG ACTATCCACG TAACATGCAT GATTTTGTTG GTGGAAGATT GCCCGAGTTC 
    ACTGCCGAGG AATCTAAGAT GTTGAAGGGA TCGTATGATT TTATTGGAAT TAATTACTAC 
    ACAACATATT ATGCTCAAAA TATCGATGCA AATTATCAGA GTGTTGGATT CATGTCAGAT 
    GCTCGTGCTA ATTGGACAGG AGAGAGAAAT GGAATCCCAA TAGGTCCACA GGCTGGTGTA 
    AAATGGCTTT ATATTTATCC CGAAGGCATC AGCAGGCTTT TGAATTACAC CAAAGATCTA 
    TACGGGAGCC CAACAATTTA CATTACTGAG AATGGGGTTG ATGACGTAAA TAACAATGCT 
    TCATCACTAA AGGAAGCTCT TAATGATCCC ATAAGAGAAA AATCTTACAA AGACCACCTC 
    AAGAATGTTT TGAGATCCAT CAATGAGCAT GGTGTTGATG TTAAGGGATT TTTTGCTTGG 
    TCTTTAATGG ACAATTTCGA ATGGGGAAGT GGTTATGCTG TGAGGTTCGG CCTCTACTAT 
    GTTGATTACA AAAATGATTT GAAACGATAT CCTAAACAAT CAGTCAAGTG GTTCAAGCAG 
    TTTCTTAGAA GAGACTCCCA CAGTCCTATT CCACATACGT ATCCTCTGAT TACTTCTAAT 
    GAAACGTCGA AAATTGAAGA TAGTTTGGTT CGGGATGCTA AAAGGCCAAG AAATGCCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024447854.1
    CDS1..1560
    Translation

    Target ORF information:

    RefSeq Version XM_024592086.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa beta-glucosidase 12 (LOC18097640), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024592086.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGGAAGCA TTGATGACTT CAGCCGTAAT TCTTTCCCAG ATGATTTTGT ATTCGGAACA 
    TCCTCATCAG CTTACCAGTA TGAAGGTGAA ACAAACAAAC ATGGTAGAGG ACCAGCTATA 
    TGGGACACTT TCACTGTGGA ACATACAGAG AGAATAAATG ATCATAGCAA CGGAAATGTA 
    GCTGTTGATT TCTATCATCG CTATAAGGAA GATGTGCAAA GAATGAAAGA AATGGGAATG 
    GATGCTTTCA GATTCTCCAT TTCTTGGTCT AGAGTATTAC CACATGGCAG GTTAAGTGCT 
    GGAGTAAACG AAGAAGGCAT CAAATTTTAT AACGATCTCA TTGATGACCT CCTTAAGAAT 
    GGTTTGCAGC CTTACGTTAC TCTCTTTCAC TGGGATACTC CACAAGCTTT GGAAGATAAA 
    TATGGTGGTT TCTTAAGTCC TAACATTGTA AATGATTTCC GAGACTTTGT CGACCTTTGT 
    TTCCAAAATT TTGGAGACCG GGTGAAGAAG TGGATTACTT TGAACGAGCC ATGGATGTTC 
    AGTGTTCAAG GTTATGACAT GGGCACGATG GCACCCGGTA GGATTTCTGT CGTTGTAAAT 
    GATCCACACC GATCCTTAAA CACCGGTGCC ACTGAAGTGT ATATGGTTAG CCATCATTTG 
    TTGCTTGCTC ATGCTGCGGC AGTGAAACTA TACAAGGAAA AATATCAGTC ATGTCAAGGT 
    GGACAGATTG GGATAACACT TGTTTCTCAT TGGTTTGAAC CTTACTCAAA CAGTGAAGCA 
    GATCAAAATG CAACCAAAAG AAGCCTCGAC TTCATGCTTG GTTGGTTCAT GGATCCTTTA 
    ACTAATGGTG ACTATCCACG TAACATGCAT GATTTTGTTG GTGGAAGATT GCCCGAGTTC 
    ACTGCCGAGG AATCTAAGAT GTTGAAGGGA TCGTATGATT TTATTGGAAT TAATTACTAC 
    ACAACATATT ATGCTCAAAA TATCGATGCA AATTATCAGA GTGTTGGATT CATGTCAGAT 
    GCTCGTGCTA ATTGGACAGG AGAGAGAAAT GGAATCCCAA TAGGTCCACA GGCTGGTGTA 
    AAATGGCTTT ATATTTATCC CGAAGGCATC AGCAGGCTTT TGAATTACAC CAAAGATCTA 
    TACGGGAGCC CAACAATTTA CATTACTGAG AATGGGGTTG ATGACGTAAA TAACAATGCT 
    TCATCACTAA AGGAAGCTCT TAATGATCCC ATAAGAGAAA AATCTTACAA AGACCACCTC 
    AAGAATGTTT TGAGATCCAT CAATGAGCAT GGTGTTGATG TTAAGGGATT TTTTGCTTGG 
    TCTTTAATGG ACAATTTCGA ATGGGGAAGT GGTTATGCTG TGAGGTTCGG CCTCTACTAT 
    GTTGATTACA AAAATGATTT GAAACGATAT CCTAAACAAT CAGTCAAGTG GTTCAAGCAG 
    TTTCTTAGAA GAGACTCCCA CAGTCCTATT CCACATACGT ATCCTCTGAT TACTTCTAAT 
    GAAACGTCGA AAATTGAAGA TAGTTTGGTT CGGGATGCTA AAAGGCCAAG AAATGCCTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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