ORF » Species Summary » Populus trichocarpa » POPTR_0002s18130g cDNA ORF clone

POPTR_0002s18130g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0002s18130g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0002s18130g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa07038 XM_006386598.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0002s18130g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa424492 XM_006386598.2
Latest version!		 Populus trichocarpa caffeic acid 3-O-methyltransferase (LOC18096397), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0002s18130g ( XM_006386598.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006386660.1 Populus trichocarpa hypothetical protein (POPTR_0002s18130g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa07038
    Clone ID Related Accession (Same CDS sequence) XM_006386598.1
    Accession Version XM_006386598.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1080bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGCATCTT CTATAGAAAA CCACGTCAGT CAAGTTGATG AAGCGAAAGA TGAAAACTTT 
    GGATATGCCA TGCAACTAGC TTTGAGCTCA GTGCTACCCA TGACTCTACA CACGGCGATT 
    CAGCTTGGCA TCTTTGAGAT CATAGCCAAA GCAGGTCCAG ATGTCAAACT CTCTGCTGCA 
    GATATCGCAG CCAAGTTGCC CACAGATAAC CCCGATACAC CAAAGATGGT GGACCGTATT 
    CTAAGGCTCT TGGCTAGCCA CCAAGTGCTT TGTTGTTTTG TCGATGGCTC GGAGAGGTTC 
    TACAGTCTGG CTCCTGTGTC CATGTACTTT GTGCGCAACC AAAATGGTGT TTCTTTGGCC 
    CCCTTCATGG CCTTGAATCA TGAAAACGTC ATCTTACAGA GCTGGTCTCA ACTAAAAGAT 
    GCAGTTCTTG AAGGAGGAGT TGCGTTTCAC AGAGTCCATG GAGTACATGC CTTTGAGTAC 
    AATGGCTTGG ACCCTAGGTT CAATCAGGTA TTCAACACAG CAATGTACAA CCAAACCACT 
    GTTGTAAATG GAAATATGCT TGAGAAATAC AATGGTTTCA AGAACCTGAA ACAGCTGGTT 
    GATATTGGTG GTGGCTTGGG ACACACTATG AAGGCAGTAA CGTCTAAATA TCCCCAGATC 
    AAGGGTATCA ATTTCGACTT GCCACATGTT ATAGAGCATG CGCCGGCCTA TCCTGGTGTG 
    GAGCACGTGG GAGGAGATAT GTTTGAAAGT GTTCCCAAAG GAGATGCCAT TTTCCTGAAG 
    TGGATACTCC ATAATTGGAG TGATGATCAC TGCTTGAAGT TGTTGAAGAA CTGCTACAAA 
    GCTATTCCAG AGGATGGGAA GGTAATTGTT ATGGAATCAG TTCTTCCGAT CACGGCCAAG 
    ACAAGCCCTG CTGCGAAAGC GATCTCGCAA CTTGATGTAC TGATGATGAT GTCTCAAAAC 
    CCAGGAGGGA AAGAACGGAC TGAAGATGAA TTCATGGCCC TGGCCACTGC AGCTGGATTC 
    CGTGGCATCA AATTTGAAAC CTTTGTTTGT AATTTTTGGG TCATGGAGTT CTTCAAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006386660.1
    CDS1..1080
    Translation

    Target ORF information:

    RefSeq Version XM_006386598.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0002s18130g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006386598.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGCATCTT CTATAGAAAA CCACGTCAGT CAAGTTGATG AAGCGAAAGA TGAAAACTTT 
    GGATATGCCA TGCAACTAGC TTTGAGCTCA GTGCTACCCA TGACTCTACA CACGGCGATT 
    CAGCTTGGCA TCTTTGAGAT CATAGCCAAA GCAGGTCCAG ATGTCAAACT CTCTGCTGCA 
    GATATCGCAG CCAAGTTGCC CACAGATAAC CCCGATACAC CAAAGATGGT GGACCGTATT 
    CTAAGGCTCT TGGCTAGCCA CCAAGTGCTT TGTTGTTTTG TCGATGGCTC GGAGAGGTTC 
    TACAGTCTGG CTCCTGTGTC CATGTACTTT GTGCGCAACC AAAATGGTGT TTCTTTGGCC 
    CCCTTCATGG CCTTGAATCA TGAAAACGTC ATCTTACAGA GCTGGTCTCA ACTAAAAGAT 
    GCAGTTCTTG AAGGAGGAGT TGCGTTTCAC AGAGTCCATG GAGTACATGC CTTTGAGTAC 
    AATGGCTTGG ACCCTAGGTT CAATCAGGTA TTCAACACAG CAATGTACAA CCAAACCACT 
    GTTGTAAATG GAAATATGCT TGAGAAATAC AATGGTTTCA AGAACCTGAA ACAGCTGGTT 
    GATATTGGTG GTGGCTTGGG ACACACTATG AAGGCAGTAA CGTCTAAATA TCCCCAGATC 
    AAGGGTATCA ATTTCGACTT GCCACATGTT ATAGAGCATG CGCCGGCCTA TCCTGGTGTG 
    GAGCACGTGG GAGGAGATAT GTTTGAAAGT GTTCCCAAAG GAGATGCCAT TTTCCTGAAG 
    TGGATACTCC ATAATTGGAG TGATGATCAC TGCTTGAAGT TGTTGAAGAA CTGCTACAAA 
    GCTATTCCAG AGGATGGGAA GGTAATTGTT ATGGAATCAG TTCTTCCGAT CACGGCCAAG 
    ACAAGCCCTG CTGCGAAAGC GATCTCGCAA CTTGATGTAC TGATGATGAT GTCTCAAAAC 
    CCAGGAGGGA AAGAACGGAC TGAAGATGAA TTCATGGCCC TGGCCACTGC AGCTGGATTC 
    CGTGGCATCA AATTTGAAAC CTTTGTTTGT AATTTTTGGG TCATGGAGTT CTTCAAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0002s18130g ( XM_006386598.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006386660.2 Populus trichocarpa caffeic acid 3-O-methyltransferase (LOC18096397), mRNA.
    Price & Availability↑
    CloneID OPa424492
    Clone ID Related Accession (Same CDS sequence) XM_006386598.2
    Accession Version XM_006386598.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1080bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product caffeic acid 3-O-methyltransferase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006386598.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGCATCTT CTATAGAAAA CCACGTCAGT CAAGTTGATG AAGCGAAAGA TGAAAACTTT 
    GGATATGCCA TGCAACTAGC TTTGAGCTCA GTGCTACCCA TGACTCTACA CACGGCGATT 
    CAGCTTGGCA TCTTTGAGAT CATAGCCAAA GCAGGTCCAG ATGTCAAACT CTCTGCTGCA 
    GATATCGCAG CCAAGTTGCC AACAGATAAC CCCGATACAC CAAAGATGCT GGACCGTATT 
    CTAAGGCTCT TGGCTAGCCA CCAAGTGCTT TGTTGTTTTG TCGATGGCTC GGAGAGGTTC 
    TACAGTCTGG CTCCTGTGTC CATGTACTTT GTGCGCAACC AAAATGGTGT TTCTTTGGCC 
    CCCTTCATGG CCTTGAATCA TGAAAACGTC ATCTTACAGA GCTGGTCTCA ACTAAAAGAT 
    GCAGTTCTTG AAGGAGGAGT TGCGTTTCAC AGAGTCCATG GAGTACATGC CTTTGAGTAC 
    AATGGCTTGG ACCCTAGGTT CAATCAGGTA TTCAACACAG CAATGTACAA CCAAACCACT 
    GTTGTAAATG GAAATATGCT TGAGAAATAC AATGGTTTCA AGAACCTGAA ACAGCTGGTT 
    GATATTGGTG GTGGCTTGGG ACACACTATG AAGGCAGTAA CGTCTAAATA TCCCCAGATC 
    AAGGGTATCA ATTTCGACTT GCCACATGTT ATAGAGCATG CGCCGGCCTA TCCTGGTGTG 
    GAGCACGTGG GAGGAGATAT GTTTGAAAGT GTTCCCAAAG GAGATGCCAT TTTCCTGAAG 
    TGGATACTCC ATAATTGGAG TGATGATCAC TGCTTGAAGT TGTTGAAGAA CTGCTACAAA 
    GCTATTCCAG AGGATGGGAA GGTAATTGTT ATGGAATCAG TTCTTCCGAT CACGGCCAAG 
    ACAAGCCCTG CTGCGAAAGC GATCTCGCAA CTTGATGTAC TGATGATGAT GTCTCAAAAC 
    CCAGGAGGGA AAGAACGGAC TGAAGATGAA TTCATGGCCC TGGCCACTGC AGCTGGATTC 
    CGTGGCATCA AATTTGAAAC CTTTGTTTGT AATTTTTGGG TCATGGAGTT CTTCAAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006386660.2
    CDS62..1141
    Translation

    Target ORF information:

    RefSeq Version XM_006386598.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa caffeic acid 3-O-methyltransferase (LOC18096397), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006386598.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGGCATCTT CTATAGAAAA CCACGTCAGT CAAGTTGATG AAGCGAAAGA TGAAAACTTT 
    GGATATGCCA TGCAACTAGC TTTGAGCTCA GTGCTACCCA TGACTCTACA CACGGCGATT 
    CAGCTTGGCA TCTTTGAGAT CATAGCCAAA GCAGGTCCAG ATGTCAAACT CTCTGCTGCA 
    GATATCGCAG CCAAGTTGCC AACAGATAAC CCCGATACAC CAAAGATGCT GGACCGTATT 
    CTAAGGCTCT TGGCTAGCCA CCAAGTGCTT TGTTGTTTTG TCGATGGCTC GGAGAGGTTC 
    TACAGTCTGG CTCCTGTGTC CATGTACTTT GTGCGCAACC AAAATGGTGT TTCTTTGGCC 
    CCCTTCATGG CCTTGAATCA TGAAAACGTC ATCTTACAGA GCTGGTCTCA ACTAAAAGAT 
    GCAGTTCTTG AAGGAGGAGT TGCGTTTCAC AGAGTCCATG GAGTACATGC CTTTGAGTAC 
    AATGGCTTGG ACCCTAGGTT CAATCAGGTA TTCAACACAG CAATGTACAA CCAAACCACT 
    GTTGTAAATG GAAATATGCT TGAGAAATAC AATGGTTTCA AGAACCTGAA ACAGCTGGTT 
    GATATTGGTG GTGGCTTGGG ACACACTATG AAGGCAGTAA CGTCTAAATA TCCCCAGATC 
    AAGGGTATCA ATTTCGACTT GCCACATGTT ATAGAGCATG CGCCGGCCTA TCCTGGTGTG 
    GAGCACGTGG GAGGAGATAT GTTTGAAAGT GTTCCCAAAG GAGATGCCAT TTTCCTGAAG 
    TGGATACTCC ATAATTGGAG TGATGATCAC TGCTTGAAGT TGTTGAAGAA CTGCTACAAA 
    GCTATTCCAG AGGATGGGAA GGTAATTGTT ATGGAATCAG TTCTTCCGAT CACGGCCAAG 
    ACAAGCCCTG CTGCGAAAGC GATCTCGCAA CTTGATGTAC TGATGATGAT GTCTCAAAAC 
    CCAGGAGGGA AAGAACGGAC TGAAGATGAA TTCATGGCCC TGGCCACTGC AGCTGGATTC 
    CGTGGCATCA AATTTGAAAC CTTTGTTTGT AATTTTTGGG TCATGGAGTT CTTCAAGTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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