VPS33A cDNA ORF clone, Physeter catodon(sperm whale)

The following VPS33A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VPS33A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPh126332 XM_007128786.2
Latest version!
Physeter catodon VPS33A core subunit of CORVET and HOPS complexes (VPS33A), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPh324958 XM_028480233.1
Latest version!
Physeter catodon VPS33A core subunit of CORVET and HOPS complexes (VPS33A), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OPh126332 XM_007128786.1 Physeter catodon VPS33A, CORVET/HOPS core subunit (VPS33A), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPh126332
    Clone ID Related Accession (Same CDS sequence) XM_007128786.1 , XM_007128786.2
    Accession Version XM_007128786.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1791bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1519228800000
    Organism Physeter catodon(sperm whale)
    Product vacuolar protein sorting-associated protein 33A
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019873555.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Physeter catodon Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGCGACGC ACCTGTCCTA CGGGCGAGTG AACCTGAACG TGCTCCGCGA GGCGGTGCGT 
    CGCGAGCTGC GCGAGTTCCT GGACAAGTGC GCGGGAAGCA AGGCAATAGT TTGGGATGAG
    TACCTCACAG GACCATTTGG CCTGATTGCA CAGTATTCAC TACTGAAGGA ACATGAAGTG
    GAAAAAATGT TCACGCTTAA AGGAAGTCGT TTGCCAGCAG CTGATGTCAA GAATATTATT
    TTTGTTGTCA GACCCAGGCT AGAATTGATG GATATAATCG CTGAAAATGT GCTCAGTGAA
    GACAGACGTG GCCCGGCAAG AGATTTCCAC ATTTTGTTTG TGCCACGACG TAGCTTATTG
    TGCGAACAGC GGTTGAAGGA TCTAGGTGTT TTGGGATCCT TTATTCATAG GGAGGAGTAC
    AGCCTAGATC TCATTCCTTT TGATGGGGAT CTCTTATCCA TGGAATCAGA GGGTGCATTC
    AAAGAGTGCT ACCTGGAGAG CGACCAGACC AGCCTGTACC ACGCAGCCAA GGGGCTGATG
    ACCCTGCAAG CTCTGTACGG GACGATCCCC CAGATCTTTG GGAAAGGAGA GTGCGCCCGG
    CAAGTGGCCA ATATGATGAT CAGGATGAAG AGAGAGTTTA CAGGGAGCCA GAATTCAATA
    TTCCCTGTTT TTGATAATCT CTTGTTGCTC GATCGGAATG TGGATTTGTT AACGCCTCTT
    GCCACTCAGC TCACGTATGA AGGACTCATT GATGAAATTT ATGGCATTCA GAACAGTTAC
    GTGAAATTAC CTCCGGAGAA ATTTGCACCT AAGAAACAGG GCGATGGTGG TAAGGACCTT
    CCCACAGAAG CAAAGAAGCT TCAGCTGAAT TCTGCAGAGG AGCTGTATGC TGAGATCCGA
    GATAAAAACT TCAATGCAGT GGGCTCCGTG CTTAGCAAGA AAGCAAAGGT GATCTCTGCA
    GCGTTCGAGG AGAGGCACAA CGCAAAGACC GTTGGGGAGA TCAAGCAGTT CGTTTCGCAG
    CTGCCCCACA TGCAGGCAGC AAGGGGCTCC CTCGCAAACC ACACCTCGAT TGCAGAGCTA
    ATCAAAGATG TAACTACTTC TGAAGACTTC TTTGATAAAT TAACAGTGGA GCAGGAGTTT
    ATGTCTGGAA TAGACACTGA TAAGGTCAAC AGTTACATTG AGGATTGTGT TGCCCAAAAA
    CATCCGCTGA TCAAGGTGTT AAGACTAGTT TGCCTCCAAT CCGTGTGCAA TAGTGGACTC
    AAACAAAAAG TTTTGGATTA TTACAAAAGA GAAATCCTGC AGACATACGG CTATGAGCAC
    ATATTGACCT TACACAACCT AGAGAAGGCT GGCCTGCTGA AACCACAGAC GGGGGGCAGA
    AACACTTACC CAACCATCCG GAAAACGTTA CGCCTCTGGA TGGATGATGC AAACGAGCAA
    AATCCCACGG ACATATCGTA CGTGTACAGT GGCTATGCCC CTCTCAGTGT GCGCCTGGCC
    CAGCTGCTTT CCCGGCCCGG CTGGCGGAGT ATCGAGGAAG TTCTGCGTAT CCTCCCAGGG
    CCCCACTTTG AGGAGCGGCA GCCGTTGCCC ACAGGGCTAC AAAAGAAACG TCAACCGGGA
    GAAAACCGAG TCACTCTGAT ATTTTTCCTC GGGGGTGTAA CCTTTGCTGA AATTGCTGCC
    CTGCGATTTC TTTCCCAGCT GGAAGATGGA GGTACAGAAT ATGTCATCGC CACCACTAAG
    CTAATAAACG GGGCCAGCTG GATAGAGTCG CTAATGGAAA AACCTTTCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_007128848.1
    CDS48..1838
    Translation

    Target ORF information:

    RefSeq Version XM_007128786.1
    Organism Physeter catodon(sperm whale)
    Definition Physeter catodon VPS33A, CORVET/HOPS core subunit (VPS33A), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_007128786.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGCGACGC ACCTGTCCTA CGGGCGAGTG AACCTGAACG TGCTCCGCGA GGCGGTGCGT 
    CGCGAGCTGC GCGAGTTCCT GGACAAGTGC GCGGGAAGCA AGGCAATAGT TTGGGATGAG
    TACCTCACAG GACCATTTGG CCTGATTGCA CAGTATTCAC TACTGAAGGA ACATGAAGTG
    GAAAAAATGT TCACGCTTAA AGGAAGTCGT TTGCCAGCAG CTGATGTCAA GAATATTATT
    TTTGTTGTCA GACCCAGGCT AGAATTGATG GATATAATCG CTGAAAATGT GCTCAGTGAA
    GACAGACGTG GCCCGGCAAG AGATTTCCAC ATTTTGTTTG TGCCACGACG TAGCTTATTG
    TGCGAACAGC GGTTGAAGGA TCTAGGTGTT TTGGGATCCT TTATTCATAG GGAGGAGTAC
    AGCCTAGATC TCATTCCTTT TGATGGGGAT CTCTTATCCA TGGAATCAGA GGGTGCATTC
    AAAGAGTGCT ACCTGGAGAG CGACCAGACC AGCCTGTACC ACGCAGCCAA GGGGCTGATG
    ACCCTGCAAG CTCTGTACGG GACGATCCCC CAGATCTTTG GGAAAGGAGA GTGCGCCCGG
    CAAGTGGCCA ATATGATGAT CAGGATGAAG AGAGAGTTTA CAGGGAGCCA GAATTCAATA
    TTCCCTGTTT TTGATAATCT CTTGTTGCTC GATCGGAATG TGGATTTGTT AACGCCTCTT
    GCCACTCAGC TCACGTATGA AGGACTCATT GATGAAATTT ATGGCATTCA GAACAGTTAC
    GTGAAATTAC CTCCGGAGAA ATTTGCACCT AAGAAACAGG GCGATGGTGG TAAGGACCTT
    CCCACAGAAG CAAAGAAGCT TCAGCTGAAT TCTGCAGAGG AGCTGTATGC TGAGATCCGA
    GATAAAAACT TCAATGCAGT GGGCTCCGTG CTTAGCAAGA AAGCAAAGGT GATCTCTGCA
    GCGTTCGAGG AGAGGCACAA CGCAAAGACC GTTGGGGAGA TCAAGCAGTT CGTTTCGCAG
    CTGCCCCACA TGCAGGCAGC AAGGGGCTCC CTCGCAAACC ACACCTCGAT TGCAGAGCTA
    ATCAAAGATG TAACTACTTC TGAAGACTTC TTTGATAAAT TAACAGTGGA GCAGGAGTTT
    ATGTCTGGAA TAGACACTGA TAAGGTCAAC AGTTACATTG AGGATTGTGT TGCCCAAAAA
    CATCCGCTGA TCAAGGTGTT AAGACTAGTT TGCCTCCAAT CCGTGTGCAA TAGTGGACTC
    AAACAAAAAG TTTTGGATTA TTACAAAAGA GAAATCCTGC AGACATACGG CTATGAGCAC
    ATATTGACCT TACACAACCT AGAGAAGGCT GGCCTGCTGA AACCACAGAC GGGGGGCAGA
    AACACTTACC CAACCATCCG GAAAACGTTA CGCCTCTGGA TGGATGATGC AAACGAGCAA
    AATCCCACGG ACATATCGTA CGTGTACAGT GGCTATGCCC CTCTCAGTGT GCGCCTGGCC
    CAGCTGCTTT CCCGGCCCGG CTGGCGGAGT ATCGAGGAAG TTCTGCGTAT CCTCCCAGGG
    CCCCACTTTG AGGAGCGGCA GCCGTTGCCC ACAGGGCTAC AAAAGAAACG TCAACCGGGA
    GAAAACCGAG TCACTCTGAT ATTTTTCCTC GGGGGTGTAA CCTTTGCTGA AATTGCTGCC
    CTGCGATTTC TTTCCCAGCT GGAAGATGGA GGTACAGAAT ATGTCATCGC CACCACTAAG
    CTAATAAACG GGGCCAGCTG GATAGAGTCG CTAATGGAAA AACCTTTCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPh126332
    Clone ID Related Accession (Same CDS sequence) XM_007128786.1 , XM_007128786.2
    Accession Version XM_007128786.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1791bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1553011200000
    Organism Physeter catodon(sperm whale)
    Product vacuolar protein sorting-associated protein 33A isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041232.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Mar 21, 2019 this sequence version replaced XM_007128786.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Physeter catodon Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGCGACGC ACCTGTCCTA CGGGCGAGTG AACCTGAACG TGCTCCGCGA GGCGGTGCGT 
    CGCGAGCTGC GCGAGTTCCT GGACAAGTGC GCGGGAAGCA AGGCAATAGT TTGGGATGAG
    TACCTCACAG GACCATTTGG CCTGATTGCA CAGTATTCAC TACTGAAGGA ACATGAAGTG
    GAAAAAATGT TCACGCTTAA AGGAAGTCGT TTGCCAGCAG CTGATGTCAA GAATATTATT
    TTTGTTGTCA GACCCAGGCT AGAATTGATG GATATAATCG CTGAAAATGT GCTCAGTGAA
    GACAGACGTG GCCCGGCAAG AGATTTCCAC ATTTTGTTTG TGCCACGACG TAGCTTATTG
    TGCGAACAGC GGTTGAAGGA TCTAGGTGTT TTGGGATCCT TTATTCATAG GGAGGAGTAC
    AGCCTAGATC TCATTCCTTT TGATGGGGAT CTCTTATCCA TGGAATCAGA GGGTGCATTC
    AAAGAGTGCT ACCTGGAGAG CGACCAGACC AGCCTGTACC ACGCAGCCAA GGGGCTGATG
    ACCCTGCAAG CTCTGTACGG GACGATCCCC CAGATCTTTG GGAAAGGAGA GTGCGCCCGG
    CAAGTGGCCA ATATGATGAT CAGGATGAAG AGAGAGTTTA CAGGGAGCCA GAATTCAATA
    TTCCCTGTTT TTGATAATCT CTTGTTGCTC GATCGGAATG TGGATTTGTT AACGCCTCTT
    GCCACTCAGC TCACGTATGA AGGACTCATT GATGAAATTT ATGGCATTCA GAACAGTTAC
    GTGAAATTAC CTCCGGAGAA ATTTGCACCT AAGAAACAGG GCGATGGTGG TAAGGACCTT
    CCCACAGAAG CAAAGAAGCT TCAGCTGAAT TCTGCAGAGG AGCTGTATGC TGAGATCCGA
    GATAAAAACT TCAATGCAGT GGGCTCCGTG CTTAGCAAGA AAGCAAAGGT GATCTCTGCA
    GCGTTCGAGG AGAGGCACAA CGCAAAGACC GTTGGGGAGA TCAAGCAGTT CGTTTCGCAG
    CTGCCCCACA TGCAGGCAGC AAGGGGCTCC CTCGCAAACC ACACCTCGAT TGCAGAGCTA
    ATCAAAGATG TAACTACTTC TGAAGACTTC TTTGATAAAT TAACAGTGGA GCAGGAGTTT
    ATGTCTGGAA TAGACACTGA TAAGGTCAAC AGTTACATTG AGGATTGTGT TGCCCAAAAA
    CATCCGCTGA TCAAGGTGTT AAGACTAGTT TGCCTCCAAT CCGTGTGCAA TAGTGGACTC
    AAACAAAAAG TTTTGGATTA TTACAAAAGA GAAATCCTGC AGACATACGG CTATGAGCAC
    ATATTGACCT TACACAACCT AGAGAAGGCT GGCCTGCTGA AACCACAGAC GGGGGGCAGA
    AACACTTACC CAACCATCCG GAAAACGTTA CGCCTCTGGA TGGATGATGC AAACGAGCAA
    AATCCCACGG ACATATCGTA CGTGTACAGT GGCTATGCCC CTCTCAGTGT GCGCCTGGCC
    CAGCTGCTTT CCCGGCCCGG CTGGCGGAGT ATCGAGGAAG TTCTGCGTAT CCTCCCAGGG
    CCCCACTTTG AGGAGCGGCA GCCGTTGCCC ACAGGGCTAC AAAAGAAACG TCAACCGGGA
    GAAAACCGAG TCACTCTGAT ATTTTTCCTC GGGGGTGTAA CCTTTGCTGA AATTGCTGCC
    CTGCGATTTC TTTCCCAGCT GGAAGATGGA GGTACAGAAT ATGTCATCGC CACCACTAAG
    CTAATAAACG GGGCCAGCTG GATAGAGTCG CTAATGGAAA AACCTTTCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_007128848.1
    CDS56..1846
    Translation

    Target ORF information:

    RefSeq Version XM_007128786.2
    Organism Physeter catodon(sperm whale)
    Definition Physeter catodon VPS33A core subunit of CORVET and HOPS complexes (VPS33A), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_007128786.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGCGACGC ACCTGTCCTA CGGGCGAGTG AACCTGAACG TGCTCCGCGA GGCGGTGCGT 
    CGCGAGCTGC GCGAGTTCCT GGACAAGTGC GCGGGAAGCA AGGCAATAGT TTGGGATGAG
    TACCTCACAG GACCATTTGG CCTGATTGCA CAGTATTCAC TACTGAAGGA ACATGAAGTG
    GAAAAAATGT TCACGCTTAA AGGAAGTCGT TTGCCAGCAG CTGATGTCAA GAATATTATT
    TTTGTTGTCA GACCCAGGCT AGAATTGATG GATATAATCG CTGAAAATGT GCTCAGTGAA
    GACAGACGTG GCCCGGCAAG AGATTTCCAC ATTTTGTTTG TGCCACGACG TAGCTTATTG
    TGCGAACAGC GGTTGAAGGA TCTAGGTGTT TTGGGATCCT TTATTCATAG GGAGGAGTAC
    AGCCTAGATC TCATTCCTTT TGATGGGGAT CTCTTATCCA TGGAATCAGA GGGTGCATTC
    AAAGAGTGCT ACCTGGAGAG CGACCAGACC AGCCTGTACC ACGCAGCCAA GGGGCTGATG
    ACCCTGCAAG CTCTGTACGG GACGATCCCC CAGATCTTTG GGAAAGGAGA GTGCGCCCGG
    CAAGTGGCCA ATATGATGAT CAGGATGAAG AGAGAGTTTA CAGGGAGCCA GAATTCAATA
    TTCCCTGTTT TTGATAATCT CTTGTTGCTC GATCGGAATG TGGATTTGTT AACGCCTCTT
    GCCACTCAGC TCACGTATGA AGGACTCATT GATGAAATTT ATGGCATTCA GAACAGTTAC
    GTGAAATTAC CTCCGGAGAA ATTTGCACCT AAGAAACAGG GCGATGGTGG TAAGGACCTT
    CCCACAGAAG CAAAGAAGCT TCAGCTGAAT TCTGCAGAGG AGCTGTATGC TGAGATCCGA
    GATAAAAACT TCAATGCAGT GGGCTCCGTG CTTAGCAAGA AAGCAAAGGT GATCTCTGCA
    GCGTTCGAGG AGAGGCACAA CGCAAAGACC GTTGGGGAGA TCAAGCAGTT CGTTTCGCAG
    CTGCCCCACA TGCAGGCAGC AAGGGGCTCC CTCGCAAACC ACACCTCGAT TGCAGAGCTA
    ATCAAAGATG TAACTACTTC TGAAGACTTC TTTGATAAAT TAACAGTGGA GCAGGAGTTT
    ATGTCTGGAA TAGACACTGA TAAGGTCAAC AGTTACATTG AGGATTGTGT TGCCCAAAAA
    CATCCGCTGA TCAAGGTGTT AAGACTAGTT TGCCTCCAAT CCGTGTGCAA TAGTGGACTC
    AAACAAAAAG TTTTGGATTA TTACAAAAGA GAAATCCTGC AGACATACGG CTATGAGCAC
    ATATTGACCT TACACAACCT AGAGAAGGCT GGCCTGCTGA AACCACAGAC GGGGGGCAGA
    AACACTTACC CAACCATCCG GAAAACGTTA CGCCTCTGGA TGGATGATGC AAACGAGCAA
    AATCCCACGG ACATATCGTA CGTGTACAGT GGCTATGCCC CTCTCAGTGT GCGCCTGGCC
    CAGCTGCTTT CCCGGCCCGG CTGGCGGAGT ATCGAGGAAG TTCTGCGTAT CCTCCCAGGG
    CCCCACTTTG AGGAGCGGCA GCCGTTGCCC ACAGGGCTAC AAAAGAAACG TCAACCGGGA
    GAAAACCGAG TCACTCTGAT ATTTTTCCTC GGGGGTGTAA CCTTTGCTGA AATTGCTGCC
    CTGCGATTTC TTTCCCAGCT GGAAGATGGA GGTACAGAAT ATGTCATCGC CACCACTAAG
    CTAATAAACG GGGCCAGCTG GATAGAGTCG CTAATGGAAA AACCTTTCTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPh324958
    Clone ID Related Accession (Same CDS sequence) XM_028480233.1
    Accession Version XM_028480233.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1839bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1553011200000
    Organism Physeter catodon(sperm whale)
    Product vacuolar protein sorting-associated protein 33A isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041232.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Physeter catodon Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGCGACGC ACCTGTCCTA CGGGCGAGTG AACCTGAACG TGCTCCGCGA GGCGGTGCGT 
    CGCGAGCTGC GCGAGTTCCT GGACAAGTGC GCGGGAAGCA AGGCAATAGT TTGGGATGAG
    TACCTCACAG GACCATTTGG CCTGATTGCA CAGTATTCAC TACTGAAGGA ACATGAAGTG
    GAAAAAATGT TCACGCTTAA AGGAAGTCGT TTGCCAGCAG CTGATGTCAA GAATATTATT
    TTTGTTGTCA GACCCAGGCT AGAATTGATG GATATAATCG CTGAAAATGT GCTCAGTGAA
    GACAGACGTG GCCCGGCAAG AGATTTCCAC ATTTTGTTTG TGCCACGACG TAGCTTATTG
    TGCGAACAGC GGTTGAAGGA TCTAGGTGTT TTGGGATCCT TTATTCATAG GGAGGAGTAC
    AGCCTAGATC TCATTCCTTT TGATGGGGAT CTCTTATCCA TGGAATCAGA GGGTGCATTC
    AAAGAGTGCT ACCTGGAGAG CGACCAGACC AGCCTGTACC ACGCAGCCAA GGGGCTGATG
    ACCCTGCAAG CTCTGTACGG GACGATCCCC CAGATCTTTG GGAAAGGAGA GTGCGCCCGG
    GTGAGAAACG GCAGGAGGGT CCCACCTGAT CCCATGTTTT GTTTCCAGCA AGTGGCCAAT
    ATGATGATCA GGATGAAGAG AGAGTTTACA GGGAGCCAGA ATTCAATATT CCCTGTTTTT
    GATAATCTCT TGTTGCTCGA TCGGAATGTG GATTTGTTAA CGCCTCTTGC CACTCAGCTC
    ACGTATGAAG GACTCATTGA TGAAATTTAT GGCATTCAGA ACAGTTACGT GAAATTACCT
    CCGGAGAAAT TTGCACCTAA GAAACAGGGC GATGGTGGTA AGGACCTTCC CACAGAAGCA
    AAGAAGCTTC AGCTGAATTC TGCAGAGGAG CTGTATGCTG AGATCCGAGA TAAAAACTTC
    AATGCAGTGG GCTCCGTGCT TAGCAAGAAA GCAAAGGTGA TCTCTGCAGC GTTCGAGGAG
    AGGCACAACG CAAAGACCGT TGGGGAGATC AAGCAGTTCG TTTCGCAGCT GCCCCACATG
    CAGGCAGCAA GGGGCTCCCT CGCAAACCAC ACCTCGATTG CAGAGCTAAT CAAAGATGTA
    ACTACTTCTG AAGACTTCTT TGATAAATTA ACAGTGGAGC AGGAGTTTAT GTCTGGAATA
    GACACTGATA AGGTCAACAG TTACATTGAG GATTGTGTTG CCCAAAAACA TCCGCTGATC
    AAGGTGTTAA GACTAGTTTG CCTCCAATCC GTGTGCAATA GTGGACTCAA ACAAAAAGTT
    TTGGATTATT ACAAAAGAGA AATCCTGCAG ACATACGGCT ATGAGCACAT ATTGACCTTA
    CACAACCTAG AGAAGGCTGG CCTGCTGAAA CCACAGACGG GGGGCAGAAA CACTTACCCA
    ACCATCCGGA AAACGTTACG CCTCTGGATG GATGATGCAA ACGAGCAAAA TCCCACGGAC
    ATATCGTACG TGTACAGTGG CTATGCCCCT CTCAGTGTGC GCCTGGCCCA GCTGCTTTCC
    CGGCCCGGCT GGCGGAGTAT CGAGGAAGTT CTGCGTATCC TCCCAGGGCC CCACTTTGAG
    GAGCGGCAGC CGTTGCCCAC AGGGCTACAA AAGAAACGTC AACCGGGAGA AAACCGAGTC
    ACTCTGATAT TTTTCCTCGG GGGTGTAACC TTTGCTGAAA TTGCTGCCCT GCGATTTCTT
    TCCCAGCTGG AAGATGGAGG TACAGAATAT GTCATCGCCA CCACTAAGCT AATAAACGGG
    GCCAGCTGGA TAGAGTCGCT AATGGAAAAA CCTTTCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_028336034.1
    CDS58..1896
    Translation

    Target ORF information:

    RefSeq Version XM_028480233.1
    Organism Physeter catodon(sperm whale)
    Definition Physeter catodon VPS33A core subunit of CORVET and HOPS complexes (VPS33A), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_028480233.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGCGACGC ACCTGTCCTA CGGGCGAGTG AACCTGAACG TGCTCCGCGA GGCGGTGCGT 
    CGCGAGCTGC GCGAGTTCCT GGACAAGTGC GCGGGAAGCA AGGCAATAGT TTGGGATGAG
    TACCTCACAG GACCATTTGG CCTGATTGCA CAGTATTCAC TACTGAAGGA ACATGAAGTG
    GAAAAAATGT TCACGCTTAA AGGAAGTCGT TTGCCAGCAG CTGATGTCAA GAATATTATT
    TTTGTTGTCA GACCCAGGCT AGAATTGATG GATATAATCG CTGAAAATGT GCTCAGTGAA
    GACAGACGTG GCCCGGCAAG AGATTTCCAC ATTTTGTTTG TGCCACGACG TAGCTTATTG
    TGCGAACAGC GGTTGAAGGA TCTAGGTGTT TTGGGATCCT TTATTCATAG GGAGGAGTAC
    AGCCTAGATC TCATTCCTTT TGATGGGGAT CTCTTATCCA TGGAATCAGA GGGTGCATTC
    AAAGAGTGCT ACCTGGAGAG CGACCAGACC AGCCTGTACC ACGCAGCCAA GGGGCTGATG
    ACCCTGCAAG CTCTGTACGG GACGATCCCC CAGATCTTTG GGAAAGGAGA GTGCGCCCGG
    GTGAGAAACG GCAGGAGGGT CCCACCTGAT CCCATGTTTT GTTTCCAGCA AGTGGCCAAT
    ATGATGATCA GGATGAAGAG AGAGTTTACA GGGAGCCAGA ATTCAATATT CCCTGTTTTT
    GATAATCTCT TGTTGCTCGA TCGGAATGTG GATTTGTTAA CGCCTCTTGC CACTCAGCTC
    ACGTATGAAG GACTCATTGA TGAAATTTAT GGCATTCAGA ACAGTTACGT GAAATTACCT
    CCGGAGAAAT TTGCACCTAA GAAACAGGGC GATGGTGGTA AGGACCTTCC CACAGAAGCA
    AAGAAGCTTC AGCTGAATTC TGCAGAGGAG CTGTATGCTG AGATCCGAGA TAAAAACTTC
    AATGCAGTGG GCTCCGTGCT TAGCAAGAAA GCAAAGGTGA TCTCTGCAGC GTTCGAGGAG
    AGGCACAACG CAAAGACCGT TGGGGAGATC AAGCAGTTCG TTTCGCAGCT GCCCCACATG
    CAGGCAGCAA GGGGCTCCCT CGCAAACCAC ACCTCGATTG CAGAGCTAAT CAAAGATGTA
    ACTACTTCTG AAGACTTCTT TGATAAATTA ACAGTGGAGC AGGAGTTTAT GTCTGGAATA
    GACACTGATA AGGTCAACAG TTACATTGAG GATTGTGTTG CCCAAAAACA TCCGCTGATC
    AAGGTGTTAA GACTAGTTTG CCTCCAATCC GTGTGCAATA GTGGACTCAA ACAAAAAGTT
    TTGGATTATT ACAAAAGAGA AATCCTGCAG ACATACGGCT ATGAGCACAT ATTGACCTTA
    CACAACCTAG AGAAGGCTGG CCTGCTGAAA CCACAGACGG GGGGCAGAAA CACTTACCCA
    ACCATCCGGA AAACGTTACG CCTCTGGATG GATGATGCAA ACGAGCAAAA TCCCACGGAC
    ATATCGTACG TGTACAGTGG CTATGCCCCT CTCAGTGTGC GCCTGGCCCA GCTGCTTTCC
    CGGCCCGGCT GGCGGAGTAT CGAGGAAGTT CTGCGTATCC TCCCAGGGCC CCACTTTGAG
    GAGCGGCAGC CGTTGCCCAC AGGGCTACAA AAGAAACGTC AACCGGGAGA AAACCGAGTC
    ACTCTGATAT TTTTCCTCGG GGGTGTAACC TTTGCTGAAA TTGCTGCCCT GCGATTTCTT
    TCCCAGCTGG AAGATGGAGG TACAGAATAT GTCATCGCCA CCACTAAGCT AATAAACGGG
    GCCAGCTGGA TAGAGTCGCT AATGGAAAAA CCTTTCTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.