ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » PHATRDRAFT_47067 cDNA ORF clone

PHATRDRAFT_47067 cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following PHATRDRAFT_47067 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PHATRDRAFT_47067 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb07431 XM_002181146.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    PHATRDRAFT_47067 ( XM_002181146.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002181182.1 Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.
    Price & Availability↑
    CloneID OPb07431
    Clone ID Related Accession (Same CDS sequence) XM_002181146.1
    Accession Version XM_002181146.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3714bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product predicted protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011680). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    ATGTCACGGT CCTGCGCCGA TTTCGTGCGT ACAGCGAGCT CGTGGAAAGA TCGAATACAA 
    AACCGGAACC TTATCTGGAA ATTCTTCACC GGCCAAGATC CATCAATTTT TTCCCTTGGG 
    CGTCGCCGTT TTGGAGTATC TCCCTCCTTC TGCTATGCTC CTTGCGCTGC TGTGAGCTTC 
    ACGGAAGCCG ACACCAGTCA TCCTCCACCT ACTTTTACAA GTGCCAACTG TTTGTTGGAA 
    TTTGTCCGTG TCTGCTTGAC CAGAATGTCG AATGGTATGG CAACGGCGAC TGCCCTCGGC 
    TTTGGCGGTC GGGCGCCCGC CCTGGTGCTT GACTTGCTAT CAAGGGCCGT CCATGAGGAA 
    GGGATCGTGA CGGTATCGCC AAGGCGCTCG CAAGCTTTAC CGCTGGCCTT GATGGAAGCG 
    CCGTTTCGGA CGTTTCTCAG CAACGACAAT AACAACAACA AGACGGAGAG TGGAGGCGGA 
    AAATCACCTC TTGACTTGCT CGTGTACTGT CTACCAACGA GTGTGACGGA ATATCTCAAC 
    GCTGCTCAAG AAGCCACTCT CGTCCGTTCC AAGCTCCTGT ATGGCAGTTC CGATCGCCAG 
    ATCGTGGTGG TCATATACGA TGTCCACAAG AATGCTTTTG TAGGCGGTGA GACTGCGCAA 
    ATCCTCGACG CGGTTGGTGG CAACAATTCG TATCGACAAA AACTCGCCAT GGCGAGTTTG 
    GCGTCGCTTG CCGAACTCGA TCAAAAGGCG GCCGCTCAGC TCGGCCCCGA TCGTCAACAA 
    GATTCCGTGA TTGTCGTAGG TGCCGGAGGC CGCGAGCATG CGCTCGCTGT GGCTTTGGCG 
    CAATCGCCCC TTGTCGGAAG AGTCCTGTGT TGCCCTGGTA ACGGGGGTAC CGCCGTCGAA 
    GGTGGGAAAA TCGCTAACGT TCCCAACGGT CAACAAGACA ACGAAAGTGT CGTAGCATTG 
    GTCAAGGAAA CTAACGCTGC AATGGTGGTG GTGGGTCCGG AAGCTCCTTT AGTTGACGGT 
    CTGGTGGATG CCTTGGCGAA GGAATGTCCG GGTACCATGG CGTTTGGTCC GACACAAGCG 
    GCGGCAGAAC TGGAAGCTTC CAAAGCGTTT TCCAAAGACT TTCTGCAGGA GCACGGTATT 
    CCCACCGCAA AGTATCGCAA CTTTACGGAC GTATCTGAAG CAATCGCCTA CGTGGAAAGT 
    TTGGATGAGT CAGATCGACA GGTCGTGAAG GCGTCGGGTC TCGCAGCCGG AAAAGGGGTC 
    TTACTGCCAA CGAACAAAGC CGACACCATT GCGGCTGTCA AGGAAATAAT GTCCGACAAG 
    GCTTTCGGCA ATGCCGGTGA TATCTGTGTC ATTGAATCCT TCCTGGTAGG ACCCGAAGCT 
    TCCTGCTTGG CATTTTGCGA CGGAAAAACT GCTCGTCTCA TGCCAGCGGC TCAGGACCAC 
    AAACGAGCCC TCGACGACGA TCAAGGTTTG AACACCGGAG GGATGGGAGC CTACGCACCA 
    GCACCGTGCG TCACTCCCGT ATTACAGCGT ACCATTGAGG AAATGTGTAT CAAGACGGTC 
    CAGAAAATGG CAGAGCGTGG TACACCGTAC GTTGGAGTGT TGTACGCGGG TATGATGCTG 
    ACGCCGAATG GCCCGTACGT TCTTGAATTT AACTGCCGGT TTGGGGACCC CGAGACTCAG 
    GTTGTCTTAC CGTTACTCGA AACGGATCTG TACGAGATCC TGACGGCGTG CTGTTCGGGA 
    AACCTGGATG CGATAGATGT ACGTTTCAAG GAAGGTCAAT CGGCGGCAAC AGTTGTTTGT 
    GCTGCCTTGG GATACCCTGA GGTATATCCA AAGGGTATGG AAATAACCGG TTTGGATGCC 
    GCAAATTCTT CAAATGGGGT CAAAGTTTAT CACGCGGGCA CGGATGTAGA CAACGCCGGC 
    GTCACGCGTT GTTCGGGTGG TCGTGTCTTG GCCATAACGG GTACCGGTAG CAGTCTTAAG 
    AATGCACTTC AGTCAGCTTA TAACGGTGTC AAAAGTATTC AGTTCATCGA TGTACATGGC 
    AAACATCAGT TGCACCGACG AACAGATATT GGCAAGAAGG CAACGCAAAA GAACCTCCGA 
    ATTGGGGTGC TGGGTTCAAC TCGCGGAACA GCTCTGATTC CCGTCGTTGA AGCGTGCCGG 
    AGTGGAGAGC TCGACGCCGA AATTGTGGCA TTGATCAGTA ACAAGTCCTC AGCCCCTATT 
    CTTGAAAAAG GGAGAGCTCT TGGCGTAACA GTTCTGTCAA AATTCATTTC TGCGAAGGAC 
    TTGAGCCGCG AGCAGTACGA TTCTGAGTGC ACCGCTGCTT TGGTGGCCGC TGGTGTGGAC 
    TTTGTTTTGC TTGTAGGATA CATGCGAATT TTGTCCAAGT CGTTCACAGA CTTTTGGAAA 
    AACCGATGCA TCAACGTGCA CCCGTCTCTT CTCCCTAAAC ACGCCGGCGG TATGGACCTT 
    GCAGTGCATC AAGCCGTCAT TAACGCAAAA GAAACAGAAA GTGGTTGTAC GATTCATCAG 
    GTAACGGAAG CCGTTGATGG CGGCCCTATT GTCATACAGA AGAGAGTATT GGTAGATAGT 
    GGAGACACTG CAGAATCGTT AAAAGTCAAA GTGCAATTGC AAGAGGGACC AGCGTTTGTT 
    GAGGCAATCA AGCAGTTCTC CCAAGGTGCT ACTATAAGTT ATGCCGATGC GGGAGTTAGC 
    ATTGACGCCG GCAATAAGTT TGTGGACTTG ATAAAACCAC TTTGTAAGGC CACTCGTCGT 
    GCAGGATGTG ACGCTGATCT CGGCGGCTTT GGCGGACTGT TTGATCTAGC AGCGGCTGGC 
    TATGATTCGG CCAATACAGT CATTATCGGT GCCACAGATG GTGTCGGTAC GAAACTGCGC 
    ATTGCACAAG CAACCGGGAA ACACGAGACA ATTGGCGTTG ATCTCGTTGC GATGTGCGTC 
    AACGATTTGA TTGTAGCCGG TGGCGAGCCA TTGTTCTTTC TAGACTACTT TGCCACTGGG 
    CATCTAGACG TCCACGAGGC AGCTGCGGTT GTAAAAGGGA TTGCCGAAGG CTGCCAACAA 
    GCTCAATGTG GACTCATAGG CGGAGAAACT GCAGAGATGC CATCCATGTA CGCCCCTGGT 
    GACTACGATG TTGCAGGCTT TGCCGTTGGC GCTGTTCCTC GTGATAAAAT TCTTCCCTGT 
    AGTATTTCCT CCGGAGATGT GTTGTTGGGC CTTGCAAGCA GTGGCATTCA CAGCAATGGC 
    TTCAGCTTGG TACGGAAGCT CATCGAAAAA GAGGGGCTAA ACTATTCAAG TCTATGCCCT 
    TGGGAAGAAT CTGGTGTTAC GATTGGAGAT TCGCTCTTGA CGCCCACTAA AATTTACGTT 
    AGGTCATGCC TTCCCATGAT CAAAAACGGA CTGCTGAAAG GCCTGGCTCA TATCACGGGA 
    GGCGGTCTTT TGGAGAACCT TCCTCGAAGC CTTCCGTCTG GTGTTTCCGC CGAAATTACT 
    GCGCATCCAA AACTACCTCC TGTGTTCAAA TGGATGAAAA AAGCTAGTGG TTTGTCGGAT 
    ACGGAGATGC TCCGTACCTT TAATTGCGGA ATTGGAATGG TTCTCATCCT TTCTCAGGAG 
    AATGTTGGCG AGGCAAGAGA TCTGCTTACC GCAAGCGGAG AAACAGATTT TTTCGAGTTG 
    GGTGTTTTGG TGGAAGGAGT GGGAGAAGTC GTTATGAAAA CTACTCTTAC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002181182.1
    CDS1..3714
    Translation

    Target ORF information:

    RefSeq Version XM_002181146.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 predicted protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002181146.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    ATGTCACGGT CCTGCGCCGA TTTCGTGCGT ACAGCGAGCT CGTGGAAAGA TCGAATACAA 
    AACCGGAACC TTATCTGGAA ATTCTTCACC GGCCAAGATC CATCAATTTT TTCCCTTGGG 
    CGTCGCCGTT TTGGAGTATC TCCCTCCTTC TGCTATGCTC CTTGCGCTGC TGTGAGCTTC 
    ACGGAAGCCG ACACCAGTCA TCCTCCACCT ACTTTTACAA GTGCCAACTG TTTGTTGGAA 
    TTTGTCCGTG TCTGCTTGAC CAGAATGTCG AATGGTATGG CAACGGCGAC TGCCCTCGGC 
    TTTGGCGGTC GGGCGCCCGC CCTGGTGCTT GACTTGCTAT CAAGGGCCGT CCATGAGGAA 
    GGGATCGTGA CGGTATCGCC AAGGCGCTCG CAAGCTTTAC CGCTGGCCTT GATGGAAGCG 
    CCGTTTCGGA CGTTTCTCAG CAACGACAAT AACAACAACA AGACGGAGAG TGGAGGCGGA 
    AAATCACCTC TTGACTTGCT CGTGTACTGT CTACCAACGA GTGTGACGGA ATATCTCAAC 
    GCTGCTCAAG AAGCCACTCT CGTCCGTTCC AAGCTCCTGT ATGGCAGTTC CGATCGCCAG 
    ATCGTGGTGG TCATATACGA TGTCCACAAG AATGCTTTTG TAGGCGGTGA GACTGCGCAA 
    ATCCTCGACG CGGTTGGTGG CAACAATTCG TATCGACAAA AACTCGCCAT GGCGAGTTTG 
    GCGTCGCTTG CCGAACTCGA TCAAAAGGCG GCCGCTCAGC TCGGCCCCGA TCGTCAACAA 
    GATTCCGTGA TTGTCGTAGG TGCCGGAGGC CGCGAGCATG CGCTCGCTGT GGCTTTGGCG 
    CAATCGCCCC TTGTCGGAAG AGTCCTGTGT TGCCCTGGTA ACGGGGGTAC CGCCGTCGAA 
    GGTGGGAAAA TCGCTAACGT TCCCAACGGT CAACAAGACA ACGAAAGTGT CGTAGCATTG 
    GTCAAGGAAA CTAACGCTGC AATGGTGGTG GTGGGTCCGG AAGCTCCTTT AGTTGACGGT 
    CTGGTGGATG CCTTGGCGAA GGAATGTCCG GGTACCATGG CGTTTGGTCC GACACAAGCG 
    GCGGCAGAAC TGGAAGCTTC CAAAGCGTTT TCCAAAGACT TTCTGCAGGA GCACGGTATT 
    CCCACCGCAA AGTATCGCAA CTTTACGGAC GTATCTGAAG CAATCGCCTA CGTGGAAAGT 
    TTGGATGAGT CAGATCGACA GGTCGTGAAG GCGTCGGGTC TCGCAGCCGG AAAAGGGGTC 
    TTACTGCCAA CGAACAAAGC CGACACCATT GCGGCTGTCA AGGAAATAAT GTCCGACAAG 
    GCTTTCGGCA ATGCCGGTGA TATCTGTGTC ATTGAATCCT TCCTGGTAGG ACCCGAAGCT 
    TCCTGCTTGG CATTTTGCGA CGGAAAAACT GCTCGTCTCA TGCCAGCGGC TCAGGACCAC 
    AAACGAGCCC TCGACGACGA TCAAGGTTTG AACACCGGAG GGATGGGAGC CTACGCACCA 
    GCACCGTGCG TCACTCCCGT ATTACAGCGT ACCATTGAGG AAATGTGTAT CAAGACGGTC 
    CAGAAAATGG CAGAGCGTGG TACACCGTAC GTTGGAGTGT TGTACGCGGG TATGATGCTG 
    ACGCCGAATG GCCCGTACGT TCTTGAATTT AACTGCCGGT TTGGGGACCC CGAGACTCAG 
    GTTGTCTTAC CGTTACTCGA AACGGATCTG TACGAGATCC TGACGGCGTG CTGTTCGGGA 
    AACCTGGATG CGATAGATGT ACGTTTCAAG GAAGGTCAAT CGGCGGCAAC AGTTGTTTGT 
    GCTGCCTTGG GATACCCTGA GGTATATCCA AAGGGTATGG AAATAACCGG TTTGGATGCC 
    GCAAATTCTT CAAATGGGGT CAAAGTTTAT CACGCGGGCA CGGATGTAGA CAACGCCGGC 
    GTCACGCGTT GTTCGGGTGG TCGTGTCTTG GCCATAACGG GTACCGGTAG CAGTCTTAAG 
    AATGCACTTC AGTCAGCTTA TAACGGTGTC AAAAGTATTC AGTTCATCGA TGTACATGGC 
    AAACATCAGT TGCACCGACG AACAGATATT GGCAAGAAGG CAACGCAAAA GAACCTCCGA 
    ATTGGGGTGC TGGGTTCAAC TCGCGGAACA GCTCTGATTC CCGTCGTTGA AGCGTGCCGG 
    AGTGGAGAGC TCGACGCCGA AATTGTGGCA TTGATCAGTA ACAAGTCCTC AGCCCCTATT 
    CTTGAAAAAG GGAGAGCTCT TGGCGTAACA GTTCTGTCAA AATTCATTTC TGCGAAGGAC 
    TTGAGCCGCG AGCAGTACGA TTCTGAGTGC ACCGCTGCTT TGGTGGCCGC TGGTGTGGAC 
    TTTGTTTTGC TTGTAGGATA CATGCGAATT TTGTCCAAGT CGTTCACAGA CTTTTGGAAA 
    AACCGATGCA TCAACGTGCA CCCGTCTCTT CTCCCTAAAC ACGCCGGCGG TATGGACCTT 
    GCAGTGCATC AAGCCGTCAT TAACGCAAAA GAAACAGAAA GTGGTTGTAC GATTCATCAG 
    GTAACGGAAG CCGTTGATGG CGGCCCTATT GTCATACAGA AGAGAGTATT GGTAGATAGT 
    GGAGACACTG CAGAATCGTT AAAAGTCAAA GTGCAATTGC AAGAGGGACC AGCGTTTGTT 
    GAGGCAATCA AGCAGTTCTC CCAAGGTGCT ACTATAAGTT ATGCCGATGC GGGAGTTAGC 
    ATTGACGCCG GCAATAAGTT TGTGGACTTG ATAAAACCAC TTTGTAAGGC CACTCGTCGT 
    GCAGGATGTG ACGCTGATCT CGGCGGCTTT GGCGGACTGT TTGATCTAGC AGCGGCTGGC 
    TATGATTCGG CCAATACAGT CATTATCGGT GCCACAGATG GTGTCGGTAC GAAACTGCGC 
    ATTGCACAAG CAACCGGGAA ACACGAGACA ATTGGCGTTG ATCTCGTTGC GATGTGCGTC 
    AACGATTTGA TTGTAGCCGG TGGCGAGCCA TTGTTCTTTC TAGACTACTT TGCCACTGGG 
    CATCTAGACG TCCACGAGGC AGCTGCGGTT GTAAAAGGGA TTGCCGAAGG CTGCCAACAA 
    GCTCAATGTG GACTCATAGG CGGAGAAACT GCAGAGATGC CATCCATGTA CGCCCCTGGT 
    GACTACGATG TTGCAGGCTT TGCCGTTGGC GCTGTTCCTC GTGATAAAAT TCTTCCCTGT 
    AGTATTTCCT CCGGAGATGT GTTGTTGGGC CTTGCAAGCA GTGGCATTCA CAGCAATGGC 
    TTCAGCTTGG TACGGAAGCT CATCGAAAAA GAGGGGCTAA ACTATTCAAG TCTATGCCCT 
    TGGGAAGAAT CTGGTGTTAC GATTGGAGAT TCGCTCTTGA CGCCCACTAA AATTTACGTT 
    AGGTCATGCC TTCCCATGAT CAAAAACGGA CTGCTGAAAG GCCTGGCTCA TATCACGGGA 
    GGCGGTCTTT TGGAGAACCT TCCTCGAAGC CTTCCGTCTG GTGTTTCCGC CGAAATTACT 
    GCGCATCCAA AACTACCTCC TGTGTTCAAA TGGATGAAAA AAGCTAGTGG TTTGTCGGAT 
    ACGGAGATGC TCCGTACCTT TAATTGCGGA ATTGGAATGG TTCTCATCCT TTCTCAGGAG 
    AATGTTGGCG AGGCAAGAGA TCTGCTTACC GCAAGCGGAG AAACAGATTT TTTCGAGTTG 
    GGTGTTTTGG TGGAAGGAGT GGGAGAAGTC GTTATGAAAA CTACTCTTAC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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