ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » VDE cDNA ORF clone

VDE cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following VDE gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VDE cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb02114 XM_002178607.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 violaxanthin deepoxidase (VDE), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    VDE ( XM_002178607.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002178643.1 Phaeodactylum tricornutum CCAP 1055/1 violaxanthin deepoxidase (VDE), mRNA.
    Price & Availability↑
    CloneID OPb02114
    Clone ID Related Accession (Same CDS sequence) XM_002178607.1
    Accession Version XM_002178607.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1314bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product violaxanthin deepoxidase
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011672). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGAAGTTTC TCGGTGTTAC CAGCTTGCTT TGTCTCTGGT CGGTGGTCAA CAGAGAGAAC 
    GTGAGTGAAG CCTTTGCGCC CCGACACCAG TCACTCTCCC GTCCATCGTC GAGAACGACA 
    TCGGCTTTCT CTCGGGCTCC AATTTTGTCG CTCCGCAAGT ACGACTCAGA TTCAGAGGTT 
    GAAAACGATT TACTCTCGAA GCTGAATCCA TTTCAAAACT GGCAAACAGC TTTGCAGAGT 
    ACAGCATTGG CACTAACGAT TGGTGTCGCT TCCTGGACGT CCCTTCCCAC AATTGTCCCT 
    CCAGCGTTTG CCGCCACCAC GGATTCCAAA TCCATCGTTT CGTGTCTCTT CCAGAAATGC 
    CCTCTCCCCC TCGCCAAGTG CATTGCCAAC CCCAAGTGCC TCGCCAACGT TGTTTGCATT 
    AACACCTGTA CGGGACGACC GGACGAGATT GAGTGCCAGA TCGAATGTGG AAATCTGTTC 
    GAAAATGAAG TGGTAGGTGA ATTCAATAAA TGCGTCCTGA CCGATATGAA GTGCGTGCCG 
    AAGCAGGGCG ATGACGGATC ATATCCCGTT CCCGCACCCG AAATCGTCGT ACCCAAGTTT 
    GACACCAAGT TCTTCGATGG ACGACTCTAC ATCTCAGCCG GACAAAACAA ATTGTTCGAT 
    GTATTTCCCT GCCAGGTGCA CTTTTTTACC GAAACCGAAA AGGGCAAGTT CTTCGGCAAA 
    CTGAATTGGC GGGTGGAGCA GCCAGACGGG AACTTCTTCA CCCGGGATGC GCTCCAAGAA 
    TTCGTGCAAG ATCCGAATCA GCCGGGTCAC TTGATCAACC ACGACAACGA ATACCTACAT 
    TACGAAGACG ACTGGTGGGT GATTGACTAC GAATACGACG GCAACAAGGA CGGCGTCCCC 
    CCGTTTGCGT TCGTCTACTA TCGCGGCAAT AACGACGCCT GGGAAGGATA CGGCGGAGTC 
    GTCGTGTACA CGCGCGCTGC CCAGCTACCT GAGTCTCTGT TACCTCGTTT GCGTGTGGCC 
    GCCGAAAAGA TTGGCTTTGA CTTCGACAAA GATTTCGTCA TTACGGATAA TACATGTCCG 
    ACTGATCTGA GTGGCAAAGA AAAGCAAATT TTACGCGAAA AGTTTGCCGG TAAGGTTGCT 
    CTGCAAACCG AGCAACAGTT GCAGGCCCAG GTCACACGGC TACGGGGAAA CGCGGTGAAT 
    TCCATCAAGG CGCAAAAGCT GTTTTTTGAG CAAGGTCTAG AAGGTGCGCA AAAGGCGTAT 
    GATGCCTTGG AAGAGACAGA AAAGCAGTTT GAACGAGAAA CCTCCCAGCA ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002178643.1
    CDS23..1336
    Translation

    Target ORF information:

    RefSeq Version XM_002178607.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 violaxanthin deepoxidase (VDE), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002178607.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGAAGTTTC TCGGTGTTAC CAGCTTGCTT TGTCTCTGGT CGGTGGTCAA CAGAGAGAAC 
    GTGAGTGAAG CCTTTGCGCC CCGACACCAG TCACTCTCCC GTCCATCGTC GAGAACGACA 
    TCGGCTTTCT CTCGGGCTCC AATTTTGTCG CTCCGCAAGT ACGACTCAGA TTCAGAGGTT 
    GAAAACGATT TACTCTCGAA GCTGAATCCA TTTCAAAACT GGCAAACAGC TTTGCAGAGT 
    ACAGCATTGG CACTAACGAT TGGTGTCGCT TCCTGGACGT CCCTTCCCAC AATTGTCCCT 
    CCAGCGTTTG CCGCCACCAC GGATTCCAAA TCCATCGTTT CGTGTCTCTT CCAGAAATGC 
    CCTCTCCCCC TCGCCAAGTG CATTGCCAAC CCCAAGTGCC TCGCCAACGT TGTTTGCATT 
    AACACCTGTA CGGGACGACC GGACGAGATT GAGTGCCAGA TCGAATGTGG AAATCTGTTC 
    GAAAATGAAG TGGTAGGTGA ATTCAATAAA TGCGTCCTGA CCGATATGAA GTGCGTGCCG 
    AAGCAGGGCG ATGACGGATC ATATCCCGTT CCCGCACCCG AAATCGTCGT ACCCAAGTTT 
    GACACCAAGT TCTTCGATGG ACGACTCTAC ATCTCAGCCG GACAAAACAA ATTGTTCGAT 
    GTATTTCCCT GCCAGGTGCA CTTTTTTACC GAAACCGAAA AGGGCAAGTT CTTCGGCAAA 
    CTGAATTGGC GGGTGGAGCA GCCAGACGGG AACTTCTTCA CCCGGGATGC GCTCCAAGAA 
    TTCGTGCAAG ATCCGAATCA GCCGGGTCAC TTGATCAACC ACGACAACGA ATACCTACAT 
    TACGAAGACG ACTGGTGGGT GATTGACTAC GAATACGACG GCAACAAGGA CGGCGTCCCC 
    CCGTTTGCGT TCGTCTACTA TCGCGGCAAT AACGACGCCT GGGAAGGATA CGGCGGAGTC 
    GTCGTGTACA CGCGCGCTGC CCAGCTACCT GAGTCTCTGT TACCTCGTTT GCGTGTGGCC 
    GCCGAAAAGA TTGGCTTTGA CTTCGACAAA GATTTCGTCA TTACGGATAA TACATGTCCG 
    ACTGATCTGA GTGGCAAAGA AAAGCAAATT TTACGCGAAA AGTTTGCCGG TAAGGTTGCT 
    CTGCAAACCG AGCAACAGTT GCAGGCCCAG GTCACACGGC TACGGGGAAA CGCGGTGAAT 
    TCCATCAAGG CGCAAAAGCT GTTTTTTGAG CAAGGTCTAG AAGGTGCGCA AAAGGCGTAT 
    GATGCCTTGG AAGAGACAGA AAAGCAGTTT GAACGAGAAA CCTCCCAGCA ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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