ORF » Species Summary » Phaeodactylum tricornutum CCAP 1055/1 » VDR cDNA ORF clone

VDR cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1

The following VDR gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VDR cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPb01386 XM_002177477.1
Latest version!		 Phaeodactylum tricornutum CCAP 1055/1 violaxanthin deepoxidase-related, chloroplast precursor (VDR), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    VDR ( XM_002177477.1 ) cDNA ORF clone, Phaeodactylum tricornutum CCAP 1055/1 -> XP_002177513.1 Phaeodactylum tricornutum CCAP 1055/1 violaxanthin deepoxidase-related, chloroplast precursor (VDR), mRNA.
    Price & Availability↑
    CloneID OPb01386
    Clone ID Related Accession (Same CDS sequence) XM_002177477.1
    Accession Version XM_002177477.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1764bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Product violaxanthin deepoxidase-related, chloroplast precursor
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_011669). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGAAGCTCC ACCGGAAAGG TCGTTATCGT CTCTTGGTCA CGGCAGTATT GCTGGGAACC 
    GTGTGTTCCT TTGTTCCCGA GAATTTACGG TCGGGATCCG TTCGCATTCC GAGAAAAAAT 
    GCGAACGCGG GCAGCGTACC AGGAACTCAC ACGGTTTCGA AACAACCATC CGCATCGGCG 
    ACGCGTCATA AAGTCTCCCA GACTTCGATC GACGCGAACG CTCTACCAAT CAAGAACGAC 
    TTGATCCAAG GACCCGTTAG CGCAAACAAA TCTATTGGTT CCATCACTTT TTTGCTTCCA 
    TCCTCGGGAG CGGACGAAAT CAAAACCAAC TTTGGATCGT CGTCGCCCGT GGGAAATCCT 
    TCCCTCGATG AAGCCGTTCG TCATCTTGCT AACAAATCAC AGTACTTTTC GGATGGACGG 
    GTGGAGACGA GAATTGTGTA CGTTCCCATC GAAGAGCAAG ACGAATCCGT TTGGAAGGAT 
    TTGCTCGAAA CCGACGTCTT GCTGGCCATG GGTTTACAAT ACGAAGCCGA TCTCGCCTTT 
    GCCCGAAAGC TCTTCCAGCA ACGCCACGAT CGAGATGCGG AACACAGATT CCGCCAGTGC 
    CACTTTGCCA TTGACTGCGC ACAATCCTTC CCAACCATGG TAGGACCATA CGACTCGGAA 
    AATCCATCGT TCCGTGCGAA ACTATTGCCC TGGACCAAGC ATGCTTCCGG AAAGCGTTTG 
    AGCCAGCAAA TGGTGGCATT GCTACAACGA GGAAACTCGG ACGACTTTGT TTTCGCGATT 
    ATGCTCTTTC TGAATCAGTT TTCGGGGTCG TCAGTTGACT GGGTCAAGCA CAGCATTGAT 
    GCAACTTGGG AAAAGGGTCC ACTACGGAAC GCCCAGGAAG TTGTCTCCAT GGTTTCCAAG 
    TGCGGAGACT GTGTTGTTAA ATGCGTTCAG GACGATAACT GTCGCGAGTG TCTCGAAGTG 
    CTGACCGCGC TGGATACTCG TGATCAGGTT GCATCCTACC GTACCATTGT CTCCTACGAG 
    TCGGATTTGC TGAAGGACTT TTCCTTCTGC ATTTTGCAAA AGAACAACAT TTTCAATTGC 
    GACGCTTCTC TCCCGACCTT GCCCAACGTG CAACCTGTCG CCACGTGGCG GGAACAGCCT 
    CTGACGGAGG ACATTGCTCG GTCGCTGCTC GTGGGCCACT TGAACGACGA AGCGGCACCC 
    GAAAGTTCTT TGCGCACCGA CATTTCCTGG AAAGTCGCTT GCGGTGCCAA CGAAGCCTAT 
    GATAAGTTTC CTTCGCAGAA CCAACTCTTC TATCCCGCTG CTCGCGGTCG AGATTTGTGG 
    TACGATCCCG TTTTCCGCGT AGAAACTTTG GATGGTCGAA ATGTTTGGTG CAAACGTCAT 
    TACAAAGTGC GTCCGGCCGA CATTCCCGGT ACTTTTCGAT TTTCAGTGCT CGACAATGGT 
    ATTACGTCGA ACGAATTCTG GACCATTGTC GGCGTCGCTG ACGATTTGTC CTGGATTGTC 
    TTTCACTATG CCGGTGCCGC TAGTGCCGTA GGACAACGAT ATCTAGGTGG ATTGCTGTGT 
    ACCGCGGATG GATCGTTGCC GGACGAGTCG CAACGACCAG AGATTTGGCG CGTGTTGCGA 
    AGTGCCGGCA TTCAACCATG GGATTTGTAC ACCGTTAACA ACGACTTGAC TAGTCCAGGG 
    GCCCAAGAGG CCGGTCCACC ACCGCTGGAC TATTTCCGCA GAGAGGTCCT GGCCAAGCGA 
    GCGGCTAGTA GTCCTCATCC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002177513.1
    CDS34..1797
    Translation

    Target ORF information:

    RefSeq Version XM_002177477.1
    Organism Phaeodactylum tricornutum CCAP 1055/1
    Definition Phaeodactylum tricornutum CCAP 1055/1 violaxanthin deepoxidase-related, chloroplast precursor (VDR), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002177477.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGAAGCTCC ACCGGAAAGG TCGTTATCGT CTCTTGGTCA CGGCAGTATT GCTGGGAACC 
    GTGTGTTCCT TTGTTCCCGA GAATTTACGG TCGGGATCCG TTCGCATTCC GAGAAAAAAT 
    GCGAACGCGG GCAGCGTACC AGGAACTCAC ACGGTTTCGA AACAACCATC CGCATCGGCG 
    ACGCGTCATA AAGTCTCCCA GACTTCGATC GACGCGAACG CTCTACCAAT CAAGAACGAC 
    TTGATCCAAG GACCCGTTAG CGCAAACAAA TCTATTGGTT CCATCACTTT TTTGCTTCCA 
    TCCTCGGGAG CGGACGAAAT CAAAACCAAC TTTGGATCGT CGTCGCCCGT GGGAAATCCT 
    TCCCTCGATG AAGCCGTTCG TCATCTTGCT AACAAATCAC AGTACTTTTC GGATGGACGG 
    GTGGAGACGA GAATTGTGTA CGTTCCCATC GAAGAGCAAG ACGAATCCGT TTGGAAGGAT 
    TTGCTCGAAA CCGACGTCTT GCTGGCCATG GGTTTACAAT ACGAAGCCGA TCTCGCCTTT 
    GCCCGAAAGC TCTTCCAGCA ACGCCACGAT CGAGATGCGG AACACAGATT CCGCCAGTGC 
    CACTTTGCCA TTGACTGCGC ACAATCCTTC CCAACCATGG TAGGACCATA CGACTCGGAA 
    AATCCATCGT TCCGTGCGAA ACTATTGCCC TGGACCAAGC ATGCTTCCGG AAAGCGTTTG 
    AGCCAGCAAA TGGTGGCATT GCTACAACGA GGAAACTCGG ACGACTTTGT TTTCGCGATT 
    ATGCTCTTTC TGAATCAGTT TTCGGGGTCG TCAGTTGACT GGGTCAAGCA CAGCATTGAT 
    GCAACTTGGG AAAAGGGTCC ACTACGGAAC GCCCAGGAAG TTGTCTCCAT GGTTTCCAAG 
    TGCGGAGACT GTGTTGTTAA ATGCGTTCAG GACGATAACT GTCGCGAGTG TCTCGAAGTG 
    CTGACCGCGC TGGATACTCG TGATCAGGTT GCATCCTACC GTACCATTGT CTCCTACGAG 
    TCGGATTTGC TGAAGGACTT TTCCTTCTGC ATTTTGCAAA AGAACAACAT TTTCAATTGC 
    GACGCTTCTC TCCCGACCTT GCCCAACGTG CAACCTGTCG CCACGTGGCG GGAACAGCCT 
    CTGACGGAGG ACATTGCTCG GTCGCTGCTC GTGGGCCACT TGAACGACGA AGCGGCACCC 
    GAAAGTTCTT TGCGCACCGA CATTTCCTGG AAAGTCGCTT GCGGTGCCAA CGAAGCCTAT 
    GATAAGTTTC CTTCGCAGAA CCAACTCTTC TATCCCGCTG CTCGCGGTCG AGATTTGTGG 
    TACGATCCCG TTTTCCGCGT AGAAACTTTG GATGGTCGAA ATGTTTGGTG CAAACGTCAT 
    TACAAAGTGC GTCCGGCCGA CATTCCCGGT ACTTTTCGAT TTTCAGTGCT CGACAATGGT 
    ATTACGTCGA ACGAATTCTG GACCATTGTC GGCGTCGCTG ACGATTTGTC CTGGATTGTC 
    TTTCACTATG CCGGTGCCGC TAGTGCCGTA GGACAACGAT ATCTAGGTGG ATTGCTGTGT 
    ACCGCGGATG GATCGTTGCC GGACGAGTCG CAACGACCAG AGATTTGGCG CGTGTTGCGA 
    AGTGCCGGCA TTCAACCATG GGATTTGTAC ACCGTTAACA ACGACTTGAC TAGTCCAGGG 
    GCCCAAGAGG CCGGTCCACC ACCGCTGGAC TATTTCCGCA GAGAGGTCCT GGCCAAGCGA 
    GCGGCTAGTA GTCCTCATCC TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


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