Gene Symbol | DQA |
Entrez Gene ID | 101108962 |
Full Name | HLA class II histocompatibility antigen, DQ alpha 2 chain |
Synonyms | Ovar-DQA2 |
Gene Type | protein-coding |
Organism | Ovis aries(sheep) |
ORF » Species Summary » Ovis aries » DQA cDNA ORF clone
Gene Symbol | DQA |
Entrez Gene ID | 101108962 |
Full Name | HLA class II histocompatibility antigen, DQ alpha 2 chain |
Synonyms | Ovar-DQA2 |
Gene Type | protein-coding |
Organism | Ovis aries(sheep) |
mRNA | Protein | Name |
---|---|---|
XM_027958341.1 | XP_027814142.1 | HLA class II histocompatibility antigen, DQ alpha 2 chain isoform X2 |
NM_001308597.1 | NP_001295526.1 | HLA class II histocompatibility antigen, DQ alpha 2 chain precursor |
XM_027958340.1 | XP_027814141.1 | HLA class II histocompatibility antigen, DQ alpha 2 chain isoform X1 |
An ancient interlocus recombination increases class II MHC DQA diversity in sheep and other Bovidae.
Ballingall KT, Steele P, Lantier I, Cotelli M, Todd H, Lopez G, Martin E, Lantier F
Animal genetics46(3)333-6(2015 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following DQA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DQA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSm29913 | |
Clone ID Related Accession (Same CDS sequence) | NM_001308597.1 | |
Accession Version | NM_001308597.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 768bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1549641600000 | |
Organism | Ovis aries(sheep) | |
Product | HLA class II histocompatibility antigen, DQ alpha 2 chain precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from HG798791.1. On May 12, 2015 this sequence version replaced XM_004018907.2. ##Evidence-Data-START## Transcript exon combination :: HG798791.1, HG798789.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA104495058 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGG GCCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001295526.1 |
CDS | 3..770 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGG GCCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSm71308 | |
Clone ID Related Accession (Same CDS sequence) | XM_027958340.1 | |
Accession Version | XM_027958340.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 768bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1549296000000 | |
Organism | Ovis aries(sheep) | |
Product | HLA class II histocompatibility antigen, DQ alpha 2 chain isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040271.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Ovis aries Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGG GCCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_027814141.1 |
CDS | 68..835 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGG GCCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSm71309 | |
Clone ID Related Accession (Same CDS sequence) | XM_027958341.1 | |
Accession Version | XM_027958341.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 660bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1549296000000 | |
Organism | Ovis aries(sheep) | |
Product | HLA class II histocompatibility antigen, DQ alpha 2 chain isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_040271.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Ovis aries Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGG GCCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_027814142.1 |
CDS | 73..732 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTCCTGA ACAGAGCTCT GATTCTGGGG GCCCTCGCCC TGACCACCAT GATGAGCCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
An ancient interlocus recombination increases class II MHC DQA diversity in sheep and other Bovidae. |