ORF » Species Summary » Oryzias latipes » LOC100049442 cDNA ORF clone

LOC100049442 cDNA ORF clone, Oryzias latipes(Japanese medaka)

The following LOC100049442 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100049442 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OJa06073 XM_004071616.4
Latest version!		 Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OJa21031 XM_011478063.3
Latest version!		 Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OJa21031 XM_011478063.2 Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OJa06073 XM_004071616.3 Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC100049442 ( XM_004071616.3 ) cDNA ORF clone, Oryzias latipes(Japanese medaka) -> XP_004071664.1 Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OJa06073
    Clone ID Related Accession (Same CDS sequence) XM_004071616.3 , XM_004071616.4
    Accession Version XM_004071616.3 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1611bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1491408000000
    Organism Oryzias latipes(Japanese medaka)
    Product nuclear receptor subfamily 5 group A member 2 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_019866.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 7, 2017 this sequence version replaced XM_004071616.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryzias latipes Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGACAGAC CTGGTTATGG CTTGGAGCAG CCTCAGCCTC TTTTTCACCA AATTTGTAAT 
    TACCCAGAGG ATCTTTCAGC TTTGGAGGGA TCTTCAACAT CTCAGGAGCA AAAGACAGAG 
    CAGAACAGCA GGACAGAGCC AGAGGAGAGC TGCCCCGTTT GTGGTGACAA GGTGTCGGGA 
    TACCACTATG GACTGCTCAC CTGTGAGAGC TGCAAGGGCT TCTTCAAACG CTCAGTGCAG 
    AACAACAAGC ACTACATCTG TGCTGAACAA CAGAGCTGCC CCATGAACCT TTCCCAGAGA 
    AAACGCTGCC CTTTCTGCCG CTTCCAGAAG TGTTTGGCTG TTGGTATGAA GAGAGAAGCT 
    GTGAGACCGG ATCGGATGAG AGGCGGCAGG AATAAATTTG GGCCTATATA CCGACGGGAC 
    AGGCAGATGA AACGACAAAA GGCAAACACT GCTCCCTTCA GGACTGAGAA GGAAACTACA 
    CAGACACACT GCCCCATATC TCCAAACGAT CCTCACCTTT CAGGCTGTCG TTCAATCGAT 
    CCATCATCTT CAGATGGCTT CAGTGTAACC TACATGTATC CCAGCAGCAC GGGGCAGGGA 
    GGGGAACTCA AGCCTCTGGA CTCCTCCGTG AACCACAGAG TGCTCACTCC TCCCTCTCTA 
    CCTTATCCTG GAGCATACTG CTCCTTATCT GGATTCCCGC AGGAAAAAGG AGAGTTTTTT 
    CTCAGTTACA GCTCAGCTTC CTCACAATAC CCAGAGAGTT TGACCCCAAA GACTGCAACC 
    ACATCCAGAA AATCCCCTGA ATCATCACCT TGCTCTACAC CGAACTCAGC TGCAGCTCCA 
    TCCCAGTTTT TGAGTAAAAC ACCAACCACT CCTCCATCTC CTCATTCTCG TAGCTTCCTG 
    AACCAGCTCA TGGAAGGTGA ACAAGATGAG AGCCTTCTGT GCACCAAAGT TCTGGCCATT 
    CTGCAGAGAG AACAGGCCAA TCGAGGGAAA CACGATCGTC TAAACACATT TAGCATCATG 
    TGCAAGATTG CTGACCAGAC GCTGTTTGGG CTCGTGGAGT GGGCCAGAAA TACGGACCTC 
    TTCAAGGAGC TGAAGGTGGA GGACCAGATG GTGCTGCTGC AGAGCTGCTG GAGTGAGCTG 
    CTGGTCCTGG ACCACCTCTG CAGACAAGTC ACATATGGCA AAGAGAGTTG CGTCTATCTG 
    GTCACAGGTC AACAGATTGA GGTGTCAACA ATTGTTTCCC AGGCTGGAGT GACACTCAGT 
    AGCTTGGTGT CAAGGGCCCA GGACCTGGTG GCCAAACTTA AGGCACTCCA GTTGGACAAA 
    CAGGAGTTTG TCTGTCTCAA ATACCTAGTG CTGTTCAACC CTGATGTGAA GTCAGTACAG 
    AACCGCAAGC AAGTCGAGCT AACTCAAGAG AAGGTCAACA GGGCCCTGAT GGAGCACACT 
    CAGAGAAATA ACCCAGGACA CTCAGACAAA TTCGGCCAGC TGCTTCTCCG TCTGCCCGAG 
    GTACGCAGCA TTAGTTTGCA GGTGGAGGAT TATTTGTACC AGCGCCACCT ATTAGGAGAC 
    TTACCCTGCA ACTCCCTGCT GGCAGAGATG CTGCATGCCA AACACAGTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_004071664.1
    CDS913..2523
    Translation

    Target ORF information:

    RefSeq Version XM_004071616.3
    Organism Oryzias latipes(Japanese medaka)
    Definition Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_004071616.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGACAGAC CTGGTTATGG CTTGGAGCAG CCTCAGCCTC TTTTTCACCA AATTTGTAAT 
    TACCCAGAGG ATCTTTCAGC TTTGGAGGGA TCTTCAACAT CTCAGGAGCA AAAGACAGAG 
    CAGAACAGCA GGACAGAGCC AGAGGAGAGC TGCCCCGTTT GTGGTGACAA GGTGTCGGGA 
    TACCACTATG GACTGCTCAC CTGTGAGAGC TGCAAGGGCT TCTTCAAACG CTCAGTGCAG 
    AACAACAAGC ACTACATCTG TGCTGAACAA CAGAGCTGCC CCATGAACCT TTCCCAGAGA 
    AAACGCTGCC CTTTCTGCCG CTTCCAGAAG TGTTTGGCTG TTGGTATGAA GAGAGAAGCT 
    GTGAGACCGG ATCGGATGAG AGGCGGCAGG AATAAATTTG GGCCTATATA CCGACGGGAC 
    AGGCAGATGA AACGACAAAA GGCAAACACT GCTCCCTTCA GGACTGAGAA GGAAACTACA 
    CAGACACACT GCCCCATATC TCCAAACGAT CCTCACCTTT CAGGCTGTCG TTCAATCGAT 
    CCATCATCTT CAGATGGCTT CAGTGTAACC TACATGTATC CCAGCAGCAC GGGGCAGGGA 
    GGGGAACTCA AGCCTCTGGA CTCCTCCGTG AACCACAGAG TGCTCACTCC TCCCTCTCTA 
    CCTTATCCTG GAGCATACTG CTCCTTATCT GGATTCCCGC AGGAAAAAGG AGAGTTTTTT 
    CTCAGTTACA GCTCAGCTTC CTCACAATAC CCAGAGAGTT TGACCCCAAA GACTGCAACC 
    ACATCCAGAA AATCCCCTGA ATCATCACCT TGCTCTACAC CGAACTCAGC TGCAGCTCCA 
    TCCCAGTTTT TGAGTAAAAC ACCAACCACT CCTCCATCTC CTCATTCTCG TAGCTTCCTG 
    AACCAGCTCA TGGAAGGTGA ACAAGATGAG AGCCTTCTGT GCACCAAAGT TCTGGCCATT 
    CTGCAGAGAG AACAGGCCAA TCGAGGGAAA CACGATCGTC TAAACACATT TAGCATCATG 
    TGCAAGATTG CTGACCAGAC GCTGTTTGGG CTCGTGGAGT GGGCCAGAAA TACGGACCTC 
    TTCAAGGAGC TGAAGGTGGA GGACCAGATG GTGCTGCTGC AGAGCTGCTG GAGTGAGCTG 
    CTGGTCCTGG ACCACCTCTG CAGACAAGTC ACATATGGCA AAGAGAGTTG CGTCTATCTG 
    GTCACAGGTC AACAGATTGA GGTGTCAACA ATTGTTTCCC AGGCTGGAGT GACACTCAGT 
    AGCTTGGTGT CAAGGGCCCA GGACCTGGTG GCCAAACTTA AGGCACTCCA GTTGGACAAA 
    CAGGAGTTTG TCTGTCTCAA ATACCTAGTG CTGTTCAACC CTGATGTGAA GTCAGTACAG 
    AACCGCAAGC AAGTCGAGCT AACTCAAGAG AAGGTCAACA GGGCCCTGAT GGAGCACACT 
    CAGAGAAATA ACCCAGGACA CTCAGACAAA TTCGGCCAGC TGCTTCTCCG TCTGCCCGAG 
    GTACGCAGCA TTAGTTTGCA GGTGGAGGAT TATTTGTACC AGCGCCACCT ATTAGGAGAC 
    TTACCCTGCA ACTCCCTGCT GGCAGAGATG CTGCATGCCA AACACAGTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC100049442 ( XM_004071616.4 ) cDNA ORF clone, Oryzias latipes(Japanese medaka) -> XP_004071664.1 Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OJa06073
    Clone ID Related Accession (Same CDS sequence) XM_004071616.3 , XM_004071616.4
    Accession Version XM_004071616.4 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1611bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1518537600000
    Organism Oryzias latipes(Japanese medaka)
    Product nuclear receptor subfamily 5 group A member 2 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_019866.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2018 this sequence version replaced XM_004071616.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryzias latipes Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGACAGAC CTGGTTATGG CTTGGAGCAG CCTCAGCCTC TTTTTCACCA AATTTGTAAT 
    TACCCAGAGG ATCTTTCAGC TTTGGAGGGA TCTTCAACAT CTCAGGAGCA AAAGACAGAG 
    CAGAACAGCA GGACAGAGCC AGAGGAGAGC TGCCCCGTTT GTGGTGACAA GGTGTCGGGA 
    TACCACTATG GACTGCTCAC CTGTGAGAGC TGCAAGGGCT TCTTCAAACG CTCAGTGCAG 
    AACAACAAGC ACTACATCTG TGCTGAACAA CAGAGCTGCC CCATGAACCT TTCCCAGAGA 
    AAACGCTGCC CTTTCTGCCG CTTCCAGAAG TGTTTGGCTG TTGGTATGAA GAGAGAAGCT 
    GTGAGACCGG ATCGGATGAG AGGCGGCAGG AATAAATTTG GGCCTATATA CCGACGGGAC 
    AGGCAGATGA AACGACAAAA GGCAAACACT GCTCCCTTCA GGACTGAGAA GGAAACTACA 
    CAGACACACT GCCCCATATC TCCAAACGAT CCTCACCTTT CAGGCTGTCG TTCAATCGAT 
    CCATCATCTT CAGATGGCTT CAGTGTAACC TACATGTATC CCAGCAGCAC GGGGCAGGGA 
    GGGGAACTCA AGCCTCTGGA CTCCTCCGTG AACCACAGAG TGCTCACTCC TCCCTCTCTA 
    CCTTATCCTG GAGCATACTG CTCCTTATCT GGATTCCCGC AGGAAAAAGG AGAGTTTTTT 
    CTCAGTTACA GCTCAGCTTC CTCACAATAC CCAGAGAGTT TGACCCCAAA GACTGCAACC 
    ACATCCAGAA AATCCCCTGA ATCATCACCT TGCTCTACAC CGAACTCAGC TGCAGCTCCA 
    TCCCAGTTTT TGAGTAAAAC ACCAACCACT CCTCCATCTC CTCATTCTCG TAGCTTCCTG 
    AACCAGCTCA TGGAAGGTGA ACAAGATGAG AGCCTTCTGT GCACCAAAGT TCTGGCCATT 
    CTGCAGAGAG AACAGGCCAA TCGAGGGAAA CACGATCGTC TAAACACATT TAGCATCATG 
    TGCAAGATTG CTGACCAGAC GCTGTTTGGG CTCGTGGAGT GGGCCAGAAA TACGGACCTC 
    TTCAAGGAGC TGAAGGTGGA GGACCAGATG GTGCTGCTGC AGAGCTGCTG GAGTGAGCTG 
    CTGGTCCTGG ACCACCTCTG CAGACAAGTC ACATATGGCA AAGAGAGTTG CGTCTATCTG 
    GTCACAGGTC AACAGATTGA GGTGTCAACA ATTGTTTCCC AGGCTGGAGT GACACTCAGT 
    AGCTTGGTGT CAAGGGCCCA GGACCTGGTG GCCAAACTTA AGGCACTCCA GTTGGACAAA 
    CAGGAGTTTG TCTGTCTCAA ATACCTAGTG CTGTTCAACC CTGATGTGAA GTCAGTACAG 
    AACCGCAAGC AAGTCGAGCT AACTCAAGAG AAGGTCAACA GGGCCCTGAT GGAGCACACT 
    CAGAGAAATA ACCCAGGACA CTCAGACAAA TTCGGCCAGC TGCTTCTCCG TCTGCCCGAG 
    GTACGCAGCA TTAGTTTGCA GGTGGAGGAT TATTTGTACC AGCGCCACCT ATTAGGAGAC 
    TTACCCTGCA ACTCCCTGCT GGCAGAGATG CTGCATGCCA AACACAGTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_004071664.1
    CDS927..2537
    Translation

    Target ORF information:

    RefSeq Version XM_004071616.4
    Organism Oryzias latipes(Japanese medaka)
    Definition Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_004071616.4

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGACAGAC CTGGTTATGG CTTGGAGCAG CCTCAGCCTC TTTTTCACCA AATTTGTAAT 
    TACCCAGAGG ATCTTTCAGC TTTGGAGGGA TCTTCAACAT CTCAGGAGCA AAAGACAGAG 
    CAGAACAGCA GGACAGAGCC AGAGGAGAGC TGCCCCGTTT GTGGTGACAA GGTGTCGGGA 
    TACCACTATG GACTGCTCAC CTGTGAGAGC TGCAAGGGCT TCTTCAAACG CTCAGTGCAG 
    AACAACAAGC ACTACATCTG TGCTGAACAA CAGAGCTGCC CCATGAACCT TTCCCAGAGA 
    AAACGCTGCC CTTTCTGCCG CTTCCAGAAG TGTTTGGCTG TTGGTATGAA GAGAGAAGCT 
    GTGAGACCGG ATCGGATGAG AGGCGGCAGG AATAAATTTG GGCCTATATA CCGACGGGAC 
    AGGCAGATGA AACGACAAAA GGCAAACACT GCTCCCTTCA GGACTGAGAA GGAAACTACA 
    CAGACACACT GCCCCATATC TCCAAACGAT CCTCACCTTT CAGGCTGTCG TTCAATCGAT 
    CCATCATCTT CAGATGGCTT CAGTGTAACC TACATGTATC CCAGCAGCAC GGGGCAGGGA 
    GGGGAACTCA AGCCTCTGGA CTCCTCCGTG AACCACAGAG TGCTCACTCC TCCCTCTCTA 
    CCTTATCCTG GAGCATACTG CTCCTTATCT GGATTCCCGC AGGAAAAAGG AGAGTTTTTT 
    CTCAGTTACA GCTCAGCTTC CTCACAATAC CCAGAGAGTT TGACCCCAAA GACTGCAACC 
    ACATCCAGAA AATCCCCTGA ATCATCACCT TGCTCTACAC CGAACTCAGC TGCAGCTCCA 
    TCCCAGTTTT TGAGTAAAAC ACCAACCACT CCTCCATCTC CTCATTCTCG TAGCTTCCTG 
    AACCAGCTCA TGGAAGGTGA ACAAGATGAG AGCCTTCTGT GCACCAAAGT TCTGGCCATT 
    CTGCAGAGAG AACAGGCCAA TCGAGGGAAA CACGATCGTC TAAACACATT TAGCATCATG 
    TGCAAGATTG CTGACCAGAC GCTGTTTGGG CTCGTGGAGT GGGCCAGAAA TACGGACCTC 
    TTCAAGGAGC TGAAGGTGGA GGACCAGATG GTGCTGCTGC AGAGCTGCTG GAGTGAGCTG 
    CTGGTCCTGG ACCACCTCTG CAGACAAGTC ACATATGGCA AAGAGAGTTG CGTCTATCTG 
    GTCACAGGTC AACAGATTGA GGTGTCAACA ATTGTTTCCC AGGCTGGAGT GACACTCAGT 
    AGCTTGGTGT CAAGGGCCCA GGACCTGGTG GCCAAACTTA AGGCACTCCA GTTGGACAAA 
    CAGGAGTTTG TCTGTCTCAA ATACCTAGTG CTGTTCAACC CTGATGTGAA GTCAGTACAG 
    AACCGCAAGC AAGTCGAGCT AACTCAAGAG AAGGTCAACA GGGCCCTGAT GGAGCACACT 
    CAGAGAAATA ACCCAGGACA CTCAGACAAA TTCGGCCAGC TGCTTCTCCG TCTGCCCGAG 
    GTACGCAGCA TTAGTTTGCA GGTGGAGGAT TATTTGTACC AGCGCCACCT ATTAGGAGAC 
    TTACCCTGCA ACTCCCTGCT GGCAGAGATG CTGCATGCCA AACACAGTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC100049442 ( XM_011478063.2 ) cDNA ORF clone, Oryzias latipes(Japanese medaka) -> XP_011476365.1 Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OJa21031
    Clone ID Related Accession (Same CDS sequence) XM_011478063.2 , XM_011478063.3
    Accession Version XM_011478063.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1584bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1491408000000
    Organism Oryzias latipes(Japanese medaka)
    Product nuclear receptor subfamily 5 group A member 2 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_019866.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 7, 2017 this sequence version replaced XM_011478063.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryzias latipes Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGACAGAC CTGGTTATGG CTTGGAGCAG CCTCAGCCTC TTTTTCACCA AATTTGTAAT 
    TACCCAGAGG ATCTTTCAGC TTTGGAGGGA TCTTCAACAT CTCAGGAGCA AAAGACAGAG 
    CAGAACAGCA GGACAGAGCC AGAGGAGAGC TGCCCCGTTT GTGGTGACAA GGTGTCGGGA 
    TACCACTATG GACTGCTCAC CTGTGAGAGC TGCAAGGGCT TCTTCAAACG CTCAGTGCAG 
    AACAACAAGC ACTACATCTG TGCTGAACAA CAGAGCTGCC CCATGAACCT TTCCCAGAGA 
    AAACGCTGCC CTTTCTGCCG CTTCCAGAAG TGTTTGGCTG TTGGTATGAA GAGAGAAGCT 
    GTGAGACCGG ATCGGATGAG AGGCGGCAGG AATAAATTTG GGCCTATATA CCGACGGGAC 
    AGGCAGATGA AACGACAAAA GGCAAACACT GCTCCCTTCA GGACTGAGAA GGAAACTACA 
    CAGACACACT GCCCCATATC TCCAAACGAT CCTCACCTTT CAGGCTGTCG TTCAATCGAT 
    CCATCATCTT CAGATGGCTT CAGTGTAACC TACATGTATC CCAGCAGCAC GGGGCAGGGA 
    GGGGAACTCA AGCCTCTGGA CTCCTCCGTG AACCACAGAG TGCTCACTCC TCCCTCTCTA 
    CCTTATCCTG GAGCATACTG CTCCTTATCT GGATTCCCGC AGGAAAAAGG AGAGTTTTTT 
    CTCAGTTACA GCTCAGCTTC CTCACAATAC CCAGAGAGTT TGACCCCAAA GACTGCAACC 
    ACATCCAGAA AATCCCCTGA ATCATCACCT TGCTCTACAC CGAACTCAGC TGCAGCTCCA 
    TCCCAGTTTT TGAGTAAAAC ACCAACCACT CCTCCATCTC CTCATTCTCG TAGCTTCCTG 
    AACCAGCTCA TGGAAGGTGA ACAAGATGAG AGCCTTCTGT GCACCAAAGT TCTGGCCATT 
    CTGCAGAGAG AACAGGCCAA TCGAGGGAAA CACGATCGTC TAAACACATT TAGCATCATG 
    TGCAAGATTG CTGACCAGAC GCTGTTTGGG CTCGTGGAGT GGGCCAGAAA TACGGACCTC 
    TTCAAGGAGC TGAAGGTGGA GGACCAGATG GTGCTGCTGC AGAGCTGCTG GAGTGAGCTG 
    CTGGTCCTGG ACCACCTCTG CAGACAAGTC ACATATGGCA AAGAGAGTTG CGTCTATCTG 
    GTCACAGGTC AACAGGCTGG AGTGACACTC AGTAGCTTGG TGTCAAGGGC CCAGGACCTG 
    GTGGCCAAAC TTAAGGCACT CCAGTTGGAC AAACAGGAGT TTGTCTGTCT CAAATACCTA 
    GTGCTGTTCA ACCCTGATGT GAAGTCAGTA CAGAACCGCA AGCAAGTCGA GCTAACTCAA 
    GAGAAGGTCA ACAGGGCCCT GATGGAGCAC ACTCAGAGAA ATAACCCAGG ACACTCAGAC 
    AAATTCGGCC AGCTGCTTCT CCGTCTGCCC GAGGTACGCA GCATTAGTTT GCAGGTGGAG 
    GATTATTTGT ACCAGCGCCA CCTATTAGGA GACTTACCCT GCAACTCCCT GCTGGCAGAG 
    ATGCTGCATG CCAAACACAG TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_011476365.1
    CDS918..2501
    Translation

    Target ORF information:

    RefSeq Version XM_011478063.2
    Organism Oryzias latipes(Japanese medaka)
    Definition Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_011478063.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGACAGAC CTGGTTATGG CTTGGAGCAG CCTCAGCCTC TTTTTCACCA AATTTGTAAT 
    TACCCAGAGG ATCTTTCAGC TTTGGAGGGA TCTTCAACAT CTCAGGAGCA AAAGACAGAG 
    CAGAACAGCA GGACAGAGCC AGAGGAGAGC TGCCCCGTTT GTGGTGACAA GGTGTCGGGA 
    TACCACTATG GACTGCTCAC CTGTGAGAGC TGCAAGGGCT TCTTCAAACG CTCAGTGCAG 
    AACAACAAGC ACTACATCTG TGCTGAACAA CAGAGCTGCC CCATGAACCT TTCCCAGAGA 
    AAACGCTGCC CTTTCTGCCG CTTCCAGAAG TGTTTGGCTG TTGGTATGAA GAGAGAAGCT 
    GTGAGACCGG ATCGGATGAG AGGCGGCAGG AATAAATTTG GGCCTATATA CCGACGGGAC 
    AGGCAGATGA AACGACAAAA GGCAAACACT GCTCCCTTCA GGACTGAGAA GGAAACTACA 
    CAGACACACT GCCCCATATC TCCAAACGAT CCTCACCTTT CAGGCTGTCG TTCAATCGAT 
    CCATCATCTT CAGATGGCTT CAGTGTAACC TACATGTATC CCAGCAGCAC GGGGCAGGGA 
    GGGGAACTCA AGCCTCTGGA CTCCTCCGTG AACCACAGAG TGCTCACTCC TCCCTCTCTA 
    CCTTATCCTG GAGCATACTG CTCCTTATCT GGATTCCCGC AGGAAAAAGG AGAGTTTTTT 
    CTCAGTTACA GCTCAGCTTC CTCACAATAC CCAGAGAGTT TGACCCCAAA GACTGCAACC 
    ACATCCAGAA AATCCCCTGA ATCATCACCT TGCTCTACAC CGAACTCAGC TGCAGCTCCA 
    TCCCAGTTTT TGAGTAAAAC ACCAACCACT CCTCCATCTC CTCATTCTCG TAGCTTCCTG 
    AACCAGCTCA TGGAAGGTGA ACAAGATGAG AGCCTTCTGT GCACCAAAGT TCTGGCCATT 
    CTGCAGAGAG AACAGGCCAA TCGAGGGAAA CACGATCGTC TAAACACATT TAGCATCATG 
    TGCAAGATTG CTGACCAGAC GCTGTTTGGG CTCGTGGAGT GGGCCAGAAA TACGGACCTC 
    TTCAAGGAGC TGAAGGTGGA GGACCAGATG GTGCTGCTGC AGAGCTGCTG GAGTGAGCTG 
    CTGGTCCTGG ACCACCTCTG CAGACAAGTC ACATATGGCA AAGAGAGTTG CGTCTATCTG 
    GTCACAGGTC AACAGGCTGG AGTGACACTC AGTAGCTTGG TGTCAAGGGC CCAGGACCTG 
    GTGGCCAAAC TTAAGGCACT CCAGTTGGAC AAACAGGAGT TTGTCTGTCT CAAATACCTA 
    GTGCTGTTCA ACCCTGATGT GAAGTCAGTA CAGAACCGCA AGCAAGTCGA GCTAACTCAA 
    GAGAAGGTCA ACAGGGCCCT GATGGAGCAC ACTCAGAGAA ATAACCCAGG ACACTCAGAC 
    AAATTCGGCC AGCTGCTTCT CCGTCTGCCC GAGGTACGCA GCATTAGTTT GCAGGTGGAG 
    GATTATTTGT ACCAGCGCCA CCTATTAGGA GACTTACCCT GCAACTCCCT GCTGGCAGAG 
    ATGCTGCATG CCAAACACAG TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC100049442 ( XM_011478063.3 ) cDNA ORF clone, Oryzias latipes(Japanese medaka) -> XP_011476365.1 Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OJa21031
    Clone ID Related Accession (Same CDS sequence) XM_011478063.2 , XM_011478063.3
    Accession Version XM_011478063.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1584bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1518537600000
    Organism Oryzias latipes(Japanese medaka)
    Product nuclear receptor subfamily 5 group A member 2 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_019866.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2018 this sequence version replaced XM_011478063.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryzias latipes Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGACAGAC CTGGTTATGG CTTGGAGCAG CCTCAGCCTC TTTTTCACCA AATTTGTAAT 
    TACCCAGAGG ATCTTTCAGC TTTGGAGGGA TCTTCAACAT CTCAGGAGCA AAAGACAGAG 
    CAGAACAGCA GGACAGAGCC AGAGGAGAGC TGCCCCGTTT GTGGTGACAA GGTGTCGGGA 
    TACCACTATG GACTGCTCAC CTGTGAGAGC TGCAAGGGCT TCTTCAAACG CTCAGTGCAG 
    AACAACAAGC ACTACATCTG TGCTGAACAA CAGAGCTGCC CCATGAACCT TTCCCAGAGA 
    AAACGCTGCC CTTTCTGCCG CTTCCAGAAG TGTTTGGCTG TTGGTATGAA GAGAGAAGCT 
    GTGAGACCGG ATCGGATGAG AGGCGGCAGG AATAAATTTG GGCCTATATA CCGACGGGAC 
    AGGCAGATGA AACGACAAAA GGCAAACACT GCTCCCTTCA GGACTGAGAA GGAAACTACA 
    CAGACACACT GCCCCATATC TCCAAACGAT CCTCACCTTT CAGGCTGTCG TTCAATCGAT 
    CCATCATCTT CAGATGGCTT CAGTGTAACC TACATGTATC CCAGCAGCAC GGGGCAGGGA 
    GGGGAACTCA AGCCTCTGGA CTCCTCCGTG AACCACAGAG TGCTCACTCC TCCCTCTCTA 
    CCTTATCCTG GAGCATACTG CTCCTTATCT GGATTCCCGC AGGAAAAAGG AGAGTTTTTT 
    CTCAGTTACA GCTCAGCTTC CTCACAATAC CCAGAGAGTT TGACCCCAAA GACTGCAACC 
    ACATCCAGAA AATCCCCTGA ATCATCACCT TGCTCTACAC CGAACTCAGC TGCAGCTCCA 
    TCCCAGTTTT TGAGTAAAAC ACCAACCACT CCTCCATCTC CTCATTCTCG TAGCTTCCTG 
    AACCAGCTCA TGGAAGGTGA ACAAGATGAG AGCCTTCTGT GCACCAAAGT TCTGGCCATT 
    CTGCAGAGAG AACAGGCCAA TCGAGGGAAA CACGATCGTC TAAACACATT TAGCATCATG 
    TGCAAGATTG CTGACCAGAC GCTGTTTGGG CTCGTGGAGT GGGCCAGAAA TACGGACCTC 
    TTCAAGGAGC TGAAGGTGGA GGACCAGATG GTGCTGCTGC AGAGCTGCTG GAGTGAGCTG 
    CTGGTCCTGG ACCACCTCTG CAGACAAGTC ACATATGGCA AAGAGAGTTG CGTCTATCTG 
    GTCACAGGTC AACAGGCTGG AGTGACACTC AGTAGCTTGG TGTCAAGGGC CCAGGACCTG 
    GTGGCCAAAC TTAAGGCACT CCAGTTGGAC AAACAGGAGT TTGTCTGTCT CAAATACCTA 
    GTGCTGTTCA ACCCTGATGT GAAGTCAGTA CAGAACCGCA AGCAAGTCGA GCTAACTCAA 
    GAGAAGGTCA ACAGGGCCCT GATGGAGCAC ACTCAGAGAA ATAACCCAGG ACACTCAGAC 
    AAATTCGGCC AGCTGCTTCT CCGTCTGCCC GAGGTACGCA GCATTAGTTT GCAGGTGGAG 
    GATTATTTGT ACCAGCGCCA CCTATTAGGA GACTTACCCT GCAACTCCCT GCTGGCAGAG 
    ATGCTGCATG CCAAACACAG TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_011476365.1
    CDS929..2512
    Translation

    Target ORF information:

    RefSeq Version XM_011478063.3
    Organism Oryzias latipes(Japanese medaka)
    Definition Oryzias latipes nuclear receptor subfamily 5 group A member 2 (LOC100049442), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_011478063.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGACAGAC CTGGTTATGG CTTGGAGCAG CCTCAGCCTC TTTTTCACCA AATTTGTAAT 
    TACCCAGAGG ATCTTTCAGC TTTGGAGGGA TCTTCAACAT CTCAGGAGCA AAAGACAGAG 
    CAGAACAGCA GGACAGAGCC AGAGGAGAGC TGCCCCGTTT GTGGTGACAA GGTGTCGGGA 
    TACCACTATG GACTGCTCAC CTGTGAGAGC TGCAAGGGCT TCTTCAAACG CTCAGTGCAG 
    AACAACAAGC ACTACATCTG TGCTGAACAA CAGAGCTGCC CCATGAACCT TTCCCAGAGA 
    AAACGCTGCC CTTTCTGCCG CTTCCAGAAG TGTTTGGCTG TTGGTATGAA GAGAGAAGCT 
    GTGAGACCGG ATCGGATGAG AGGCGGCAGG AATAAATTTG GGCCTATATA CCGACGGGAC 
    AGGCAGATGA AACGACAAAA GGCAAACACT GCTCCCTTCA GGACTGAGAA GGAAACTACA 
    CAGACACACT GCCCCATATC TCCAAACGAT CCTCACCTTT CAGGCTGTCG TTCAATCGAT 
    CCATCATCTT CAGATGGCTT CAGTGTAACC TACATGTATC CCAGCAGCAC GGGGCAGGGA 
    GGGGAACTCA AGCCTCTGGA CTCCTCCGTG AACCACAGAG TGCTCACTCC TCCCTCTCTA 
    CCTTATCCTG GAGCATACTG CTCCTTATCT GGATTCCCGC AGGAAAAAGG AGAGTTTTTT 
    CTCAGTTACA GCTCAGCTTC CTCACAATAC CCAGAGAGTT TGACCCCAAA GACTGCAACC 
    ACATCCAGAA AATCCCCTGA ATCATCACCT TGCTCTACAC CGAACTCAGC TGCAGCTCCA 
    TCCCAGTTTT TGAGTAAAAC ACCAACCACT CCTCCATCTC CTCATTCTCG TAGCTTCCTG 
    AACCAGCTCA TGGAAGGTGA ACAAGATGAG AGCCTTCTGT GCACCAAAGT TCTGGCCATT 
    CTGCAGAGAG AACAGGCCAA TCGAGGGAAA CACGATCGTC TAAACACATT TAGCATCATG 
    TGCAAGATTG CTGACCAGAC GCTGTTTGGG CTCGTGGAGT GGGCCAGAAA TACGGACCTC 
    TTCAAGGAGC TGAAGGTGGA GGACCAGATG GTGCTGCTGC AGAGCTGCTG GAGTGAGCTG 
    CTGGTCCTGG ACCACCTCTG CAGACAAGTC ACATATGGCA AAGAGAGTTG CGTCTATCTG 
    GTCACAGGTC AACAGGCTGG AGTGACACTC AGTAGCTTGG TGTCAAGGGC CCAGGACCTG 
    GTGGCCAAAC TTAAGGCACT CCAGTTGGAC AAACAGGAGT TTGTCTGTCT CAAATACCTA 
    GTGCTGTTCA ACCCTGATGT GAAGTCAGTA CAGAACCGCA AGCAAGTCGA GCTAACTCAA 
    GAGAAGGTCA ACAGGGCCCT GATGGAGCAC ACTCAGAGAA ATAACCCAGG ACACTCAGAC 
    AAATTCGGCC AGCTGCTTCT CCGTCTGCCC GAGGTACGCA GCATTAGTTT GCAGGTGGAG 
    GATTATTTGT ACCAGCGCCA CCTATTAGGA GACTTACCCT GCAACTCCCT GCTGGCAGAG 
    ATGCTGCATG CCAAACACAG TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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