Gene Symbol | COL11A1 |
Entrez Gene ID | 101836414 |
Full Name | collagen type XI alpha 1 chain |
Gene Type | protein-coding |
Organism | Mesocricetus auratus(Golden hamster) |
Learn More
Learn More
Learn More
Learn More
ORF » Species Summary » Mesocricetus auratus » COL11A1 cDNA ORF clone
Gene Symbol | COL11A1 |
Entrez Gene ID | 101836414 |
Full Name | collagen type XI alpha 1 chain |
Gene Type | protein-coding |
Organism | Mesocricetus auratus(Golden hamster) |
mRNA | Protein | Name |
---|---|---|
XM_021222843.1 | XP_021078502.1 | collagen alpha-1(XI) chain |
XM_013125059.1 | XP_012980513.1 | collagen alpha-1(XI) chain |
De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters.
McCann KE, Sinkiewicz DM, Norvelle A, Huhman KL
Scientific reports740472(2017 01)
Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters.
Ying B, Toth K, Spencer JF, Aurora R, Wold WS
Virology485305-12(2015 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following COL11A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL11A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMe140329 | |
Clone ID Related Accession (Same CDS sequence) | XM_013125059.1 | |
Accession Version | XM_013125059.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3702bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1436630400000 | |
Organism | Mesocricetus auratus(Golden hamster) | |
Product | collagen alpha-1(XI) chain | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801806.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 9% of CDS bases ##RefSeq-Attributes-END## |
1 | ATGGAACCCT GGTCCAGGTG GAAAATGAAA CGGTGTATCT GGAATCTCAC CATCTCAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012980513.1 |
CDS | 347..4048 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAACCCT GGTCCAGGTG GAAAATGAAA CGGTGTATCT GGAATCTCAC CATCTCAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe255074 | |
Clone ID Related Accession (Same CDS sequence) | XM_021222843.1 | |
Accession Version | XM_021222843.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5415bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1495296000000 | |
Organism | Mesocricetus auratus(golden hamster) | |
Product | collagen alpha-1(XI) chain | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801806.1) and transcript sequences (GDQJ01001281.1, GDQJ01008157.1 and GEMX01026275.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 1953 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGGAACCCT GGTCCAGGTG GAAAATGAAA CGGTGTATCT GGAATCTCAC CATCTCAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021078502.1 |
CDS | 351..5765 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAACCCT GGTCCAGGTG GAAAATGAAA CGGTGTATCT GGAATCTCAC CATCTCAACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. |
Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. |