Gene Symbol | PPARA |
Entrez Gene ID | 101827388 |
Full Name | peroxisome proliferator activated receptor alpha |
Gene Type | protein-coding |
Organism | Mesocricetus auratus(Golden hamster) |
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ORF » Species Summary » Mesocricetus auratus » PPARA cDNA ORF clone
Gene Symbol | PPARA |
Entrez Gene ID | 101827388 |
Full Name | peroxisome proliferator activated receptor alpha |
Gene Type | protein-coding |
Organism | Mesocricetus auratus(Golden hamster) |
mRNA | Protein | Name |
---|---|---|
XM_013110988.1 | XP_012966442.1 | peroxisome proliferator-activated receptor alpha isoform X2 |
XM_013110989.1 | XP_012966443.1 | peroxisome proliferator-activated receptor alpha isoform X2 |
XM_021225291.1 | XP_021080950.1 | peroxisome proliferator-activated receptor alpha isoform X1 |
XM_021225292.1 | XP_021080951.1 | peroxisome proliferator-activated receptor alpha isoform X1 |
XM_013110987.1 | XP_012966441.1 | peroxisome proliferator-activated receptor alpha isoform X1 |
XM_013110990.2 | XP_012966444.1 | peroxisome proliferator-activated receptor alpha isoform X2 |
XM_021225293.1 | XP_021080952.1 | peroxisome proliferator-activated receptor alpha isoform X1 |
NM_001281543.1 | NP_001268472.1 | peroxisome proliferator-activated receptor alpha |
XM_013110988.2 | XP_012966442.1 | peroxisome proliferator-activated receptor alpha isoform X2 |
XM_013110990.1 | XP_012966444.1 | peroxisome proliferator-activated receptor alpha isoform X2 |
De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters.
McCann KE, Sinkiewicz DM, Norvelle A, Huhman KL
Scientific reports740472(2017 01)
Molecular analysis of peroxisome proliferation in the hamster.
Choudhury AI, Sims HM, Horley NJ, Roberts RA, Tomlinson SR, Salter AM, Bruce M, Shaw PN, Kendall D, Barrett DA, Bell DR
Toxicology and applied pharmacology197(1)9-18(2004 May)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following PPARA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PPARA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMe12797 | |
Clone ID Related Accession (Same CDS sequence) | NM_001281543.1 | |
Accession Version | NM_001281543.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1501948800000 | |
Organism | Mesocricetus auratus(golden hamster) | |
Product | peroxisome proliferator-activated receptor alpha | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AJ555631.1. On Aug 1, 2013 this sequence version replaced XM_005067059.1. ##Evidence-Data-START## Transcript exon combination :: AJ555631.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01831874, SAMN01831875 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAAGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001268472.1 |
CDS | 1..1407 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAAGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe119914 | |
Clone ID Related Accession (Same CDS sequence) | XM_021225291.1 , XM_021225292.1 , XM_013110987.1 , XM_021225293.1 | |
Accession Version | XM_021225291.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1488bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1495296000000 | |
Organism | Mesocricetus auratus(golden hamster) | |
Product | peroxisome proliferator-activated receptor alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801613.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCAGC TAGCAAACAG CGTCTCTGGC TTCCTCTGTG ATATTGGCGC TCTGTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021080950.1 |
CDS | 644..2131 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCCCAGC TAGCAAACAG CGTCTCTGGC TTCCTCTGTG ATATTGGCGC TCTGTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe119914 | |
Clone ID Related Accession (Same CDS sequence) | XM_021225291.1 , XM_021225292.1 , XM_013110987.1 , XM_021225293.1 | |
Accession Version | XM_021225292.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1488bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1495296000000 | |
Organism | Mesocricetus auratus(golden hamster) | |
Product | peroxisome proliferator-activated receptor alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801613.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCAGC TAGCAAACAG CGTCTCTGGC TTCCTCTGTG ATATTGGCGC TCTGTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021080951.1 |
CDS | 715..2202 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCCCAGC TAGCAAACAG CGTCTCTGGC TTCCTCTGTG ATATTGGCGC TCTGTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe119914 | |
Clone ID Related Accession (Same CDS sequence) | XM_021225291.1 , XM_021225292.1 , XM_013110987.1 , XM_021225293.1 | |
Accession Version | XM_013110987.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1488bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1436630400000 | |
Organism | Mesocricetus auratus(Golden hamster) | |
Product | peroxisome proliferator-activated receptor alpha isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801613.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCAGC TAGCAAACAG CGTCTCTGGC TTCCTCTGTG ATATTGGCGC TCTGTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012966441.1 |
CDS | 169..1656 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCCAGC TAGCAAACAG CGTCTCTGGC TTCCTCTGTG ATATTGGCGC TCTGTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe119914 | |
Clone ID Related Accession (Same CDS sequence) | XM_021225291.1 , XM_021225292.1 , XM_013110987.1 , XM_021225293.1 | |
Accession Version | XM_021225293.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1488bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1495296000000 | |
Organism | Mesocricetus auratus(golden hamster) | |
Product | peroxisome proliferator-activated receptor alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801613.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCCCAGC TAGCAAACAG CGTCTCTGGC TTCCTCTGTG ATATTGGCGC TCTGTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021080952.1 |
CDS | 299..1786 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCCCAGC TAGCAAACAG CGTCTCTGGC TTCCTCTGTG ATATTGGCGC TCTGTGGCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe119915 | |
Clone ID Related Accession (Same CDS sequence) | XM_013110988.1 , XM_013110989.1 , XM_013110990.2 , XM_013110988.2 , XM_013110990.1 | |
Accession Version | XM_013110988.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1436630400000 | |
Organism | Mesocricetus auratus(Golden hamster) | |
Product | peroxisome proliferator-activated receptor alpha isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801613.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAGGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012966442.1 |
CDS | 529..1935 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAGGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe119915 | |
Clone ID Related Accession (Same CDS sequence) | XM_013110988.1 , XM_013110989.1 , XM_013110990.2 , XM_013110988.2 , XM_013110990.1 | |
Accession Version | XM_013110989.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1436630400000 | |
Organism | Mesocricetus auratus(Golden hamster) | |
Product | peroxisome proliferator-activated receptor alpha isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801613.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAGGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012966443.1 |
CDS | 600..2006 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAGGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe119915 | |
Clone ID Related Accession (Same CDS sequence) | XM_013110988.1 , XM_013110989.1 , XM_013110990.2 , XM_013110988.2 , XM_013110990.1 | |
Accession Version | XM_013110990.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1495296000000 | |
Organism | Mesocricetus auratus(golden hamster) | |
Product | peroxisome proliferator-activated receptor alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801613.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 22, 2017 this sequence version replaced XM_013110990.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAGGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012966444.1 |
CDS | 129..1535 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAGGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe119915 | |
Clone ID Related Accession (Same CDS sequence) | XM_013110988.1 , XM_013110989.1 , XM_013110990.2 , XM_013110988.2 , XM_013110990.1 | |
Accession Version | XM_013110988.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1495296000000 | |
Organism | Mesocricetus auratus(golden hamster) | |
Product | peroxisome proliferator-activated receptor alpha isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801613.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 22, 2017 this sequence version replaced XM_013110988.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAGGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012966442.1 |
CDS | 514..1920 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAGGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe119915 | |
Clone ID Related Accession (Same CDS sequence) | XM_013110988.1 , XM_013110989.1 , XM_013110990.2 , XM_013110988.2 , XM_013110990.1 | |
Accession Version | XM_013110990.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1407bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1436630400000 | |
Organism | Mesocricetus auratus(Golden hamster) | |
Product | peroxisome proliferator-activated receptor alpha isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801613.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAGGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012966444.1 |
CDS | 102..1508 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGGACA CAGAGAGTCC CATCTGTCCC CTCTCCCCAC TTGAGGCGGA TGACCTGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. |
Molecular analysis of peroxisome proliferation in the hamster. |