Gene Symbol | VPS54 |
Entrez Gene ID | 100665699 |
Full Name | VPS54, GARP complex subunit |
Gene Type | protein-coding |
Organism | Loxodonta africana(African savanna elephant) |
ORF » Species Summary » Loxodonta africana » VPS54 cDNA ORF clone
Gene Symbol | VPS54 |
Entrez Gene ID | 100665699 |
Full Name | VPS54, GARP complex subunit |
Gene Type | protein-coding |
Organism | Loxodonta africana(African savanna elephant) |
mRNA | Protein | Name |
---|---|---|
XM_023552680.1 | XP_023408448.1 | vacuolar protein sorting-associated protein 54 isoform X1 |
XM_010593608.1 | XP_010591910.1 | vacuolar protein sorting-associated protein 54 isoform X1 |
XM_010593609.1 | XP_010591911.1 | vacuolar protein sorting-associated protein 54 isoform X3 |
XM_003413633.2 | XP_003413681.1 | vacuolar protein sorting-associated protein 54 isoform X1 |
XM_023552683.1 | XP_023408451.1 | vacuolar protein sorting-associated protein 54 isoform X4 |
XM_023552685.1 | XP_023408453.1 | vacuolar protein sorting-associated protein 54 isoform X5 |
XM_023552681.1 | XP_023408449.1 | vacuolar protein sorting-associated protein 54 isoform X1 |
XM_023552682.1 | XP_023408450.1 | vacuolar protein sorting-associated protein 54 isoform X1 |
XM_003413634.2 | XP_003413682.1 | vacuolar protein sorting-associated protein 54 isoform X2 |
XM_010593609.2 | XP_010591911.1 | vacuolar protein sorting-associated protein 54 isoform X3 |
The following VPS54 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VPS54 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OLo102394 | |
Clone ID Related Accession (Same CDS sequence) | XM_023552683.1 | |
Accession Version | XM_023552683.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2826bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1515945600000 | |
Organism | Loxodonta africana(African savanna elephant) | |
Product | vacuolar protein sorting-associated protein 54 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003573447.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Loxodonta africana Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023408451.1 |
CDS | 117..2942 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OLo102395 | |
Clone ID Related Accession (Same CDS sequence) | XM_023552685.1 | |
Accession Version | XM_023552685.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2631bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1515945600000 | |
Organism | Loxodonta africana(African savanna elephant) | |
Product | vacuolar protein sorting-associated protein 54 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003573447.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Loxodonta africana Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023408453.1 |
CDS | 117..2747 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OLo44314 | |
Clone ID Related Accession (Same CDS sequence) | XM_023552680.1 , XM_010593608.1 , XM_003413633.2 , XM_023552681.1 , XM_023552682.1 | |
Accession Version | XM_023552680.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2934bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1515945600000 | |
Organism | Loxodonta africana(African savanna elephant) | |
Product | vacuolar protein sorting-associated protein 54 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003573447.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Loxodonta africana Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023408448.1 |
CDS | 150..3083 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OLo44314 | |
Clone ID Related Accession (Same CDS sequence) | XM_023552680.1 , XM_010593608.1 , XM_003413633.2 , XM_023552681.1 , XM_023552682.1 | |
Accession Version | XM_010593608.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2934bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1418140800000 | |
Organism | Loxodonta africana(African savanna elephant) | |
Product | vacuolar protein sorting-associated protein 54 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003573447.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Loxodonta africana Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010591910.1 |
CDS | 99..3032 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OLo44314 | |
Clone ID Related Accession (Same CDS sequence) | XM_023552680.1 , XM_010593608.1 , XM_003413633.2 , XM_023552681.1 , XM_023552682.1 | |
Accession Version | XM_003413633.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2934bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1515945600000 | |
Organism | Loxodonta africana(African savanna elephant) | |
Product | vacuolar protein sorting-associated protein 54 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003573447.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Dec 11, 2014 this sequence version replaced XM_003413633.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Loxodonta africana Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_003413681.1 |
CDS | 169..3102 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OLo44314 | |
Clone ID Related Accession (Same CDS sequence) | XM_023552680.1 , XM_010593608.1 , XM_003413633.2 , XM_023552681.1 , XM_023552682.1 | |
Accession Version | XM_023552681.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2934bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1515945600000 | |
Organism | Loxodonta africana(African savanna elephant) | |
Product | vacuolar protein sorting-associated protein 54 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003573447.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Loxodonta africana Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023408449.1 |
CDS | 2113..5046 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OLo44314 | |
Clone ID Related Accession (Same CDS sequence) | XM_023552680.1 , XM_010593608.1 , XM_003413633.2 , XM_023552681.1 , XM_023552682.1 | |
Accession Version | XM_023552682.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2934bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1515945600000 | |
Organism | Loxodonta africana(African savanna elephant) | |
Product | vacuolar protein sorting-associated protein 54 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003573447.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Loxodonta africana Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_023408450.1 |
CDS | 1750..4683 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OLo44315 | |
Clone ID Related Accession (Same CDS sequence) | XM_003413634.2 | |
Accession Version | XM_003413634.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2898bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1515945600000 | |
Organism | Loxodonta africana(African savanna elephant) | |
Product | vacuolar protein sorting-associated protein 54 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003573447.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Dec 11, 2014 this sequence version replaced XM_003413634.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Loxodonta africana Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_003413682.1 |
CDS | 169..3066 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OLo44316 | |
Clone ID Related Accession (Same CDS sequence) | XM_010593609.1 , XM_010593609.2 | |
Accession Version | XM_010593609.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2850bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1418140800000 | |
Organism | Loxodonta africana(African savanna elephant) | |
Product | vacuolar protein sorting-associated protein 54 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003573447.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Loxodonta africana Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010591911.1 |
CDS | 96..2945 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OLo44316 | |
Clone ID Related Accession (Same CDS sequence) | XM_010593609.1 , XM_010593609.2 | |
Accession Version | XM_010593609.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2850bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1515945600000 | |
Organism | Loxodonta africana(African savanna elephant) | |
Product | vacuolar protein sorting-associated protein 54 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003573447.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jan 16, 2018 this sequence version replaced XM_010593609.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Loxodonta africana Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010591911.1 |
CDS | 117..2966 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGCTTCAA GCCACAGTTC TTCACCAGTG CCTCAAGGAA GCAGCAGTGA TGTTTTCTTT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.