LINJ_36_6300 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_36_6300
Entrez Gene ID	5074096
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001469948.1	XP_001469985.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_36_6300 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_36_6300 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc07285	XM_001469948.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_36_6300 ( XM_001469948.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001469985.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc07285
Clone ID Related Accession (Same CDS sequence)	XM_001469948.1
Accession Version	XM_001469948.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2931bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009420). COMPLETENESS: incomplete on both ends.

ATGAGCTACA GCTCCGCTGC GGCGGAGTCG CCGCAGGATT ACGGGCAGCC GAGCAGGGAC 
AACGCCATCC CTTCTGAGAC GGCCTCTCCG CCGGCCTCCG CTAACGGCTC AAAAGGCCCG 
CTTACCCAGC CCGTTTTGGG GCAGAGTGGC GCGGCACCAA CAGCCCCGTC GTCCGATAAC 
GCCGAGACAG ATGCCGAGCA GCTAAAGCAG CAGCTTAAGC TCATTCAGCT ATGCTTTGCC 
GAGCACGAGT TCGGCATCAT CGTGGACGAG AACAACCCCA CCGACAGTCG CTCAAGTTCG 
TCGCCCAGTG ACGCCTCCTC GCTTTCTTCC TCATTTGACT CAGTGAATGG CCACGACGTC 
GCGCAACGAC GGCGCGGCCC GCGTGGGCTT CCCGCCTACG ATCCGCTGGC TTTTGTGAAG 
GGCAAGGTGC AGCATGGCGT GCCGCTCGCC TCGCTGTCGC AAGACCTGCA CGCCTATGCC 
GAATACCTGG AGGAAAAGAT TGCGCAGTGC GTGAACACCG ACGTCCACAC GGCGTTTGTG 
AACGTCTCAG GCCACCTCGT GGGGATGCGC GACGAGCTCT CCTACATGGA GCGCCCCCTC 
ACCGCAGCGA TGGAGAAGCT GTCTTCCGTC GTTGGCCAGC TGTCGATGAC TTCGCTGAAG 
GTGAAGGGCA AGGTGAAAGC GGCGTGTGAT GCGGAGATGG AGCGCGCCTT CGATGCGATG 
TACCTAAAGT GCATGGTTGT GTACGAGACG GTCGCGTACC AGCTGGACGA CCTAGCTGAA 
CTGCTACACA TCACGGTGAT TTCTGCGGCA ACGACGGCGC GCAGCGCGGC CACTGGCACC 
GGCACGAGTG CGGCTAGTGC ATCAATGTTC CCGCTCACGA TGGCATCGCG TGACGACAGT 
GACAAGAGCG GCGCCGCACC CGGAAAAATG TCCCTCTCGA TTGCGTCCGA TACCCTTCTT 
TCCGACGCCG CACTGGATGC ACTCGAGGAC GCGGTGCTGC TCTTCCAGGA ACTGAAGGAA 
ACCTACCAGC GCCTCGGCTC GTTGCCGTCG CGCCAGCAGG AAAAGATGGA GTTGATGGCA 
TACGTAGCCG CTGCCGAGCA GTCCGTAATG GGTGCGCTGG AGCTGGTCCT GGTTCACACC 
AGCCAACTCG TCTTCCGCCC CACCTCAGAG AACAGCGGTG CTGCTTCGAC GTCGTCTCCA 
TGTGCGGTGG CGGGCAATGA ATCCGCCACC TCCGCGCGTA TGACGGTCGG CTCGCCTGTC 
GCTCAGCAGC TTCTCGGCCG CATCATTGAG CTCTACGCCC AGGCAGGAGA GGTGAAGCAG 
TTGGCCGCGG TGTTCCGCAA CGCCGTGCTG CGTCCGCCGC TGGAGGCGGT GGTTACGTGG 
AAAGCGGCAA CACAGGCTCG GCAAAGCGTC GAGGGCACGG TGGCGCTTCT GAAGCAGGTG 
AAAGCAGTAG TACAGACTAC TTTCTTGCCA CTGTTACCGC TGCTGCGCGA GCACTACGGC 
ACCGCCTTGC ACCCAACGGC GACGATCGTG TGGCCCATCT TAAGCGAGAC GCTGGTGAAG 
AAGCTGCCGT CGCTGTACGA GGTCGGCATC CCGAATCACT TCCAGGTGAA GTACAAGGCG 
GCCTACGAGC TGCTCGCGAT CGTTGAGAGC TCCTGCGCGG ACCTGGAGGA GCTGGCAGCT 
CTGCGTCGAT CACCGGATGT CGTCCTGTGG AACCATAAGT GGAATATCAA CGTCTACGCT 
GCACTGCGCG TGAGTGAGGT GGACAAGGCG GTGCAGTCCG TCACATCCCC ACTTGATCGC 
CTCCCAGCGG CGACGAACAG CCAATACCAA CTCCGCCTCT TCTACATTGC ACATCAACAG 
CTGCTGCACC TCTTCTCATC CTCCGTGTTT TCGCTGCTGT GCACGCCGTG GTTTCTACGA 
CAGACTGTCG TGTGCTGCTA CCGGGTCCTG ACGCGGGTGC AGGAGGCTGT AGCTGCGGCG 
ACGCCGGCTC CGAGCGGCGG GGCGTCAGCT GAGGATAGAC AGACGAGCAC AACAGCGTCG 
GAAAACGGCA GCACGCCTGC CGCGGGGGCC CACGGCACGC TGCTGGTAGC GATCGCTGAC 
GCGCACACGC TGAGCAGCTT TCTGACGGGA CAGCTGCGGC ATGTCATTCT CGGGCGACTG 
GCAGCTGAGT CAGGCCAGGA GTTGGCTGCA ATGGCCTCCG TGACTGCCAC GACCGCCACT 
ACACCTGCGC CCGAGCGCAG CACGGCGGAC CTTGTCACGG AAGTGCTGCA GTTTGCCAGC 
GCGTCCGTGT GCGGCCAGTT CGTGCAGCGG GCGAGGGCAA CACTTGTGCA TCAGATCACC 
GACGCTGCGG TAGTGCCACT GCAAAATATC AAGTCCGTGC GCTCAGCATA CTCCCACACG 
CGCAAGACGA TGCCGTCCGC CGCCTCCTGG TACGTTGCTT CTGCGCTACA GCCACTGCAA 
AAGTTCGCCG AGGATGCGCA GCGCAGCGGA TTTACTGGGG CTGCGCTTCA GGACAGCGTG 
GCGGATATGT TGCGGACAGT CATGTCGCAC TTTGTGGCGC TGGCCAGAGA AACGCTACTC 
ACGGCCAAGA AGACGGAGGA GAGCTGGGAG AAGCTGCGCC GTCGCAAGGA GGGGGCTTCG 
GTGTTGCAGA CGACGGAGGT TACTCCTGAC AACAGCGAGG AGGTCAGCGG GGGCGCCGTA 
TCGACGGTTG GTGGGCAGCG CGTCACCATG GAGACAGCGA CGGACCGTGA CAAAATGACG 
ATTCAGCTGT GGATGGATGC CCGCGCTATG CTGGAGGTGG TGCAGCTGCC TCCGCTCAGC 
TTGCCCTCGG TGATGGCCGC CGAGTTGTTT CAGCCGGCGT TTGACCTACT GCGCCGCGCC 
GAGTGGATTC AAGGGGCCGA CATCCCTGAA CCGCCGGATG TCGATGCGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001469985.1
CDS	1..2931
Translation	MSYSSAAAESPQDYGQPSRDNAIPSETASPPASANGSKGPLTQPVLGQSGAAPTAPSSDNAETDAEQLKQQLKLIQLCFAEHEFGIIVDENNPTDSRSSSSPSDASSLSSSFDSVNGHDVAQRRRGPRGLPAYDPLAFVKGKVQHGVPLASLSQDLHAYAEYLEEKIAQCVNTDVHTAFVNVSGHLVGMRDELSYMERPLTAAMEKLSSVVGQLSMTSLKVKGKVKAACDAEMERAFDAMYLKCMVVYETVAYQLDDLAELLHITVISAATTARSAATGTGTSAASASMFPLTMASRDDSDKSGAAPGKMSLSIASDTLLSDAALDALEDAVLLFQELKETYQRLGSLPSRQQEKMELMAYVAAAEQSVMGALELVLVHTSQLVFRPTSENSGAASTSSPCAVAGNESATSARMTVGSPVAQQLLGRIIELYAQAGEVKQLAAVFRNAVLRPPLEAVVTWKAATQARQSVEGTVALLKQVKAVVQTTFLPLLPLLREHYGTALHPTATIVWPILSETLVKKLPSLYEVGIPNHFQVKYKAAYELLAIVESSCADLEELAALRRSPDVVLWNHKWNINVYAALRVSEVDKAVQSVTSPLDRLPAATNSQYQLRLFYIAHQQLLHLFSSSVFSLLCTPWFLRQTVVCCYRVLTRVQEAVAAATPAPSGGASAEDRQTSTTASENGSTPAAGAHGTLLVAIADAHTLSSFLTGQLRHVILGRLAAESGQELAAMASVTATTATTPAPERSTADLVTEVLQFASASVCGQFVQRARATLVHQITDAAVVPLQNIKSVRSAYSHTRKTMPSAASWYVASALQPLQKFAEDAQRSGFTGAALQDSVADMLRTVMSHFVALARETLLTAKKTEESWEKLRRRKEGASVLQTTEVTPDNSEEVSGGAVSTVGGQRVTMETATDRDKMTIQLWMDARAMLEVVQLPPLSLPSVMAAELFQPAFDLLRRAEWIQGADIPEPPDVDA

Target ORF information:

RefSeq Version	XM_001469948.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001469948.1

ORF Insert Sequence:

ATGAGCTACA GCTCCGCTGC GGCGGAGTCG CCGCAGGATT ACGGGCAGCC GAGCAGGGAC 
AACGCCATCC CTTCTGAGAC GGCCTCTCCG CCGGCCTCCG CTAACGGCTC AAAAGGCCCG 
CTTACCCAGC CCGTTTTGGG GCAGAGTGGC GCGGCACCAA CAGCCCCGTC GTCCGATAAC 
GCCGAGACAG ATGCCGAGCA GCTAAAGCAG CAGCTTAAGC TCATTCAGCT ATGCTTTGCC 
GAGCACGAGT TCGGCATCAT CGTGGACGAG AACAACCCCA CCGACAGTCG CTCAAGTTCG 
TCGCCCAGTG ACGCCTCCTC GCTTTCTTCC TCATTTGACT CAGTGAATGG CCACGACGTC 
GCGCAACGAC GGCGCGGCCC GCGTGGGCTT CCCGCCTACG ATCCGCTGGC TTTTGTGAAG 
GGCAAGGTGC AGCATGGCGT GCCGCTCGCC TCGCTGTCGC AAGACCTGCA CGCCTATGCC 
GAATACCTGG AGGAAAAGAT TGCGCAGTGC GTGAACACCG ACGTCCACAC GGCGTTTGTG 
AACGTCTCAG GCCACCTCGT GGGGATGCGC GACGAGCTCT CCTACATGGA GCGCCCCCTC 
ACCGCAGCGA TGGAGAAGCT GTCTTCCGTC GTTGGCCAGC TGTCGATGAC TTCGCTGAAG 
GTGAAGGGCA AGGTGAAAGC GGCGTGTGAT GCGGAGATGG AGCGCGCCTT CGATGCGATG 
TACCTAAAGT GCATGGTTGT GTACGAGACG GTCGCGTACC AGCTGGACGA CCTAGCTGAA 
CTGCTACACA TCACGGTGAT TTCTGCGGCA ACGACGGCGC GCAGCGCGGC CACTGGCACC 
GGCACGAGTG CGGCTAGTGC ATCAATGTTC CCGCTCACGA TGGCATCGCG TGACGACAGT 
GACAAGAGCG GCGCCGCACC CGGAAAAATG TCCCTCTCGA TTGCGTCCGA TACCCTTCTT 
TCCGACGCCG CACTGGATGC ACTCGAGGAC GCGGTGCTGC TCTTCCAGGA ACTGAAGGAA 
ACCTACCAGC GCCTCGGCTC GTTGCCGTCG CGCCAGCAGG AAAAGATGGA GTTGATGGCA 
TACGTAGCCG CTGCCGAGCA GTCCGTAATG GGTGCGCTGG AGCTGGTCCT GGTTCACACC 
AGCCAACTCG TCTTCCGCCC CACCTCAGAG AACAGCGGTG CTGCTTCGAC GTCGTCTCCA 
TGTGCGGTGG CGGGCAATGA ATCCGCCACC TCCGCGCGTA TGACGGTCGG CTCGCCTGTC 
GCTCAGCAGC TTCTCGGCCG CATCATTGAG CTCTACGCCC AGGCAGGAGA GGTGAAGCAG 
TTGGCCGCGG TGTTCCGCAA CGCCGTGCTG CGTCCGCCGC TGGAGGCGGT GGTTACGTGG 
AAAGCGGCAA CACAGGCTCG GCAAAGCGTC GAGGGCACGG TGGCGCTTCT GAAGCAGGTG 
AAAGCAGTAG TACAGACTAC TTTCTTGCCA CTGTTACCGC TGCTGCGCGA GCACTACGGC 
ACCGCCTTGC ACCCAACGGC GACGATCGTG TGGCCCATCT TAAGCGAGAC GCTGGTGAAG 
AAGCTGCCGT CGCTGTACGA GGTCGGCATC CCGAATCACT TCCAGGTGAA GTACAAGGCG 
GCCTACGAGC TGCTCGCGAT CGTTGAGAGC TCCTGCGCGG ACCTGGAGGA GCTGGCAGCT 
CTGCGTCGAT CACCGGATGT CGTCCTGTGG AACCATAAGT GGAATATCAA CGTCTACGCT 
GCACTGCGCG TGAGTGAGGT GGACAAGGCG GTGCAGTCCG TCACATCCCC ACTTGATCGC 
CTCCCAGCGG CGACGAACAG CCAATACCAA CTCCGCCTCT TCTACATTGC ACATCAACAG 
CTGCTGCACC TCTTCTCATC CTCCGTGTTT TCGCTGCTGT GCACGCCGTG GTTTCTACGA 
CAGACTGTCG TGTGCTGCTA CCGGGTCCTG ACGCGGGTGC AGGAGGCTGT AGCTGCGGCG 
ACGCCGGCTC CGAGCGGCGG GGCGTCAGCT GAGGATAGAC AGACGAGCAC AACAGCGTCG 
GAAAACGGCA GCACGCCTGC CGCGGGGGCC CACGGCACGC TGCTGGTAGC GATCGCTGAC 
GCGCACACGC TGAGCAGCTT TCTGACGGGA CAGCTGCGGC ATGTCATTCT CGGGCGACTG 
GCAGCTGAGT CAGGCCAGGA GTTGGCTGCA ATGGCCTCCG TGACTGCCAC GACCGCCACT 
ACACCTGCGC CCGAGCGCAG CACGGCGGAC CTTGTCACGG AAGTGCTGCA GTTTGCCAGC 
GCGTCCGTGT GCGGCCAGTT CGTGCAGCGG GCGAGGGCAA CACTTGTGCA TCAGATCACC 
GACGCTGCGG TAGTGCCACT GCAAAATATC AAGTCCGTGC GCTCAGCATA CTCCCACACG 
CGCAAGACGA TGCCGTCCGC CGCCTCCTGG TACGTTGCTT CTGCGCTACA GCCACTGCAA 
AAGTTCGCCG AGGATGCGCA GCGCAGCGGA TTTACTGGGG CTGCGCTTCA GGACAGCGTG 
GCGGATATGT TGCGGACAGT CATGTCGCAC TTTGTGGCGC TGGCCAGAGA AACGCTACTC 
ACGGCCAAGA AGACGGAGGA GAGCTGGGAG AAGCTGCGCC GTCGCAAGGA GGGGGCTTCG 
GTGTTGCAGA CGACGGAGGT TACTCCTGAC AACAGCGAGG AGGTCAGCGG GGGCGCCGTA 
TCGACGGTTG GTGGGCAGCG CGTCACCATG GAGACAGCGA CGGACCGTGA CAAAATGACG 
ATTCAGCTGT GGATGGATGC CCGCGCTATG CTGGAGGTGG TGCAGCTGCC TCCGCTCAGC 
TTGCCCTCGG TGATGGCCGC CGAGTTGTTT CAGCCGGCGT TTGACCTACT GCGCCGCGCC 
GAGTGGATTC AAGGGGCCGA CATCCCTGAA CCGCCGGATG TCGATGCGTG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_36_6300 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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