LINJ_35_1610 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_35_1610
Entrez Gene ID	5073068
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001468944.1	XP_001468981.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_35_1610 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_35_1610 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc06294	XM_001468944.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_35_1610 ( XM_001468944.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001468981.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

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CloneID	OLc06294
Clone ID Related Accession (Same CDS sequence)	XM_001468944.1
Accession Version	XM_001468944.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2829bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009419). COMPLETENESS: incomplete on both ends.

ATGTTCCGCT GTGAGGAGGC GACGTTTTAC GCTGGTGTAG CCCTTCTCTG TGGCGTGGTG 
GCTCTCTTTG CCGTGACTCG TGCCTTCCTC TATGCGCTCG GTGCTCTTGT TAGCCACGTG 
GTGAGGGATG GCTGCTTTCC GCCCTTACTG GAGCATAGCG TGTGCGCGGC GGCACTGATC 
ACCGCTGTCG TTCTCTTTGG TAATGTCAGC GCCCTCCTAT CGTGGATGGT GCTGCTCGCC 
ACCGTCACCA GCGGTGCGCT CTGCTGGTCG CTAAGGAGTT TCCGCTGGAT GGGCGTGAGC 
AGCTTCGTGT TCTACTCAAT CGCCTTGATG CATGTGGTTG GCCCTGCATT TGTCGAGGAG 
GTGAACCTGA CCAGGCTAGA GGTGTCTGCA CTCGTGCAGG GCCAACGAGT GCTGATCCCT 
TCGCTGCCCC CGCCACGCAC TGCGGATGAG TCGCCCTCGT CACTGTCGCC GTTGCCCGCT 
CTGCGCATCT ACGCATACTA TGACAAAGTG AAGATCGAGG GAAGTGCGTC GCCTCTGGCC 
ACCTCAACGG TGTCGGCTGC GTCGCTCAGA CTACCGCTGG AGCTGCCACC GTGGTGGACA 
CACGGCGTGC GGGGAGTCAG CGAGTGCAAC GGAAGCGTGA AGAAGTGCTC GCGGGGCGAT 
CGCATCACGC AAGGCGCCGA GCTCCCTTTT CCCACGCACC ACATAATAGC CAGCGGTGAT 
GACACGCAGC TGTCGCACTA CACGCGTGGC ATCGATATCG CTGCATCTGC CCTGGCGGGC 
AGTGACAGCA TCCATTTGGT CGGCCGCCGT GGCGCCATTC GGCACAGTCA TGTGTACTGT 
ATCATTCCAG GCAAAGGCGC CGACCCCATG CGCCCGTCGG CGACCACTGT GTCTTCGCTC 
GTATATGTGC GCTGTCTGCG GCTGCGGGAA AACATCCTGC TTCACAACGT CACCATTTAC 
TGGGCTGCTT ATCCGTCGTC ATCGTCACCG CCGCCTACAT TTGCAGAGGC GGAGCGCAGA 
GCGGACTCGT CGAGTAGCGC ACCTTATGCT TGGCGGTCGC TCCATGTAGG CGCTGACTCT 
GAGCAGGCAT GCGTGGAAGT GCAGGCTCAG CTGCAAGGAG AGCTTGGCAT GGCTGTTACC 
TCGTCGCTAA TTGAGTGTGT CGACGAGGTA GACATGGCAA AGTTGCCGCC GTCGTTTGTC 
GCCAAGGCAC CGCTGCTCGT GTGGCTTGGG TGGCAGCTCC CCGGCTACGT GCACCGTGTG 
CAGGACATCC TCCTCTTCTT CTCGAGTCAC GTCGCCGCAC CGGCATCGGC GCTGGTTGTG 
GTGGTATGTC GCATGAGCTA CAAGGCCGCG TCCGCGCTGG GGCAACAGTG TGGGGTTTGG 
CTGGTGCAGA TGGCGCCATA CGTGAAGCAT GGGGCGGAGC AAGTCGCTGT ATTTGCGGAA 
GGAGCTCTGT GCGGTTCCTC TGCGCGACGA GAGGCGTTGA TCGGCGCAGA GGAAGGCGCC 
GTCGATGCAC GGAGAGCCGT GCTGCGCGCT ATGGCGACTC CGTCGTCGGG GTGTGCCGCT 
TTTACGCGCG CGCACGCGAC GCGCTCAGCC TTCCGCGCCG GCGCACAAAT GCGTACGTCC 
GTCGTCTCCG CCGTGTCTGC CGCCGTGGAC GGCCTCGACC TGGTGCCGGG TGTGTGGTCC 
GTGTATGCTT GGGCGTGGAG GGCGGAGCAC CGCGTCACGC TATGGATCGT TGCGGCGCTA 
CAGAACGCCT TTTGTTTCGC GTTGTGCGTA GTGCTGCAGC CGATTGCCCG ATCGCTGATC 
ATCGCCGCGC AAGACTGTGC GGCTCTGGCG CCCAAGCTCG TCGTTTTACT GCGCTGTCTG 
GGGCGAGCTA TTTCTCAGCT CCGCATCTTA ACCTACTTTG CACGCTGCTG CACTTTCATG 
TGGGCGCTGG AGAAGCGTGT GTGGCACTAC GAGTGGGCCG CGCTCGAGCT CGTACTGACC 
TTTCTCGTAG TCCAGTGCGA GACGGTGGCT TGTGTATTCG CCAAGCACAC TGTCGTGGGT 
GTTGGCTGGG CGAACAGTCT AGTGCGACAC TACAACGCCA CTTCCTTTTC TATTCACATA 
GCTGTAACCT TCCTTCAGAC GGCGCTTCTG GGGATCGCGA TGCGCAACGA GCTGCGCATG 
TTTGTCGTGG CAGAGCAGCA GCAAGCGCCG GCCCGCAACT TGTTTTCTCG CTACATGCCG 
AGCAGCTTGG CAACGTGGCT GCCGCCGAGC TCCTTTGCGA ATCATGTCAA CGGATTCTGG 
ATGCTGGTGC GTGCCCATCT CGTTGAGTGT GTGCGGTATT TCCTGCTGCA TGCAGTGGCT 
GCTTTGGTGC TAATCGGCCT GTCTGTGCTG CCCTTCGCCA GCAAGCTGTA TGCCCTGTCT 
CTTCGCTACC TGTTCCCTTG GCTGTCGTGT CAGTACTTCC TCGCCTTCTT CTCGCCCGAT 
CTACCGACGG TGCGACGCGT CGCGGTGTAC TTCGTCGGTC GCATGGCCGT TGCAGCGGTG 
CTGCAGGACA CTATCGGTGA TTTCATTTAC CGTGTGCTGA AAGACTTACT GATAGCCGTG 
GGACTAACCG GTGGTCTCGC GCTGCTGCTG TGGGGCTGGC CGCAGCGCGC GACGCTGGCA 
AAGCAGGTGG CGACGGCCAT CGCGGACAGC CTTCAGACTA CCCCAATGCC GGCGCGTGTG 
AGCGTGACAG CGGCTGCCGA CTGCAGCGAC GCAGGGTTGA GGGTCGCAGA GGAAGCCGCG 
GAAGACGAGG AGGCGCGGCA GCGGGACGTC TCTGTAGCAA AGCAAATCGA CCTTACCGAC 
GCCGCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001468981.1
CDS	1..2829
Translation	MFRCEEATFYAGVALLCGVVALFAVTRAFLYALGALVSHVVRDGCFPPLLEHSVCAAALITAVVLFGNVSALLSWMVLLATVTSGALCWSLRSFRWMGVSSFVFYSIALMHVVGPAFVEEVNLTRLEVSALVQGQRVLIPSLPPPRTADESPSSLSPLPALRIYAYYDKVKIEGSASPLATSTVSAASLRLPLELPPWWTHGVRGVSECNGSVKKCSRGDRITQGAELPFPTHHIIASGDDTQLSHYTRGIDIAASALAGSDSIHLVGRRGAIRHSHVYCIIPGKGADPMRPSATTVSSLVYVRCLRLRENILLHNVTIYWAAYPSSSSPPPTFAEAERRADSSSSAPYAWRSLHVGADSEQACVEVQAQLQGELGMAVTSSLIECVDEVDMAKLPPSFVAKAPLLVWLGWQLPGYVHRVQDILLFFSSHVAAPASALVVVVCRMSYKAASALGQQCGVWLVQMAPYVKHGAEQVAVFAEGALCGSSARREALIGAEEGAVDARRAVLRAMATPSSGCAAFTRAHATRSAFRAGAQMRTSVVSAVSAAVDGLDLVPGVWSVYAWAWRAEHRVTLWIVAALQNAFCFALCVVLQPIARSLIIAAQDCAALAPKLVVLLRCLGRAISQLRILTYFARCCTFMWALEKRVWHYEWAALELVLTFLVVQCETVACVFAKHTVVGVGWANSLVRHYNATSFSIHIAVTFLQTALLGIAMRNELRMFVVAEQQQAPARNLFSRYMPSSLATWLPPSSFANHVNGFWMLVRAHLVECVRYFLLHAVAALVLIGLSVLPFASKLYALSLRYLFPWLSCQYFLAFFSPDLPTVRRVAVYFVGRMAVAAVLQDTIGDFIYRVLKDLLIAVGLTGGLALLLWGWPQRATLAKQVATAIADSLQTTPMPARVSVTAAADCSDAGLRVAEEAAEDEEARQRDVSVAKQIDLTDAA

Target ORF information:

RefSeq Version	XM_001468944.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001468944.1

ORF Insert Sequence:

ATGTTCCGCT GTGAGGAGGC GACGTTTTAC GCTGGTGTAG CCCTTCTCTG TGGCGTGGTG 
GCTCTCTTTG CCGTGACTCG TGCCTTCCTC TATGCGCTCG GTGCTCTTGT TAGCCACGTG 
GTGAGGGATG GCTGCTTTCC GCCCTTACTG GAGCATAGCG TGTGCGCGGC GGCACTGATC 
ACCGCTGTCG TTCTCTTTGG TAATGTCAGC GCCCTCCTAT CGTGGATGGT GCTGCTCGCC 
ACCGTCACCA GCGGTGCGCT CTGCTGGTCG CTAAGGAGTT TCCGCTGGAT GGGCGTGAGC 
AGCTTCGTGT TCTACTCAAT CGCCTTGATG CATGTGGTTG GCCCTGCATT TGTCGAGGAG 
GTGAACCTGA CCAGGCTAGA GGTGTCTGCA CTCGTGCAGG GCCAACGAGT GCTGATCCCT 
TCGCTGCCCC CGCCACGCAC TGCGGATGAG TCGCCCTCGT CACTGTCGCC GTTGCCCGCT 
CTGCGCATCT ACGCATACTA TGACAAAGTG AAGATCGAGG GAAGTGCGTC GCCTCTGGCC 
ACCTCAACGG TGTCGGCTGC GTCGCTCAGA CTACCGCTGG AGCTGCCACC GTGGTGGACA 
CACGGCGTGC GGGGAGTCAG CGAGTGCAAC GGAAGCGTGA AGAAGTGCTC GCGGGGCGAT 
CGCATCACGC AAGGCGCCGA GCTCCCTTTT CCCACGCACC ACATAATAGC CAGCGGTGAT 
GACACGCAGC TGTCGCACTA CACGCGTGGC ATCGATATCG CTGCATCTGC CCTGGCGGGC 
AGTGACAGCA TCCATTTGGT CGGCCGCCGT GGCGCCATTC GGCACAGTCA TGTGTACTGT 
ATCATTCCAG GCAAAGGCGC CGACCCCATG CGCCCGTCGG CGACCACTGT GTCTTCGCTC 
GTATATGTGC GCTGTCTGCG GCTGCGGGAA AACATCCTGC TTCACAACGT CACCATTTAC 
TGGGCTGCTT ATCCGTCGTC ATCGTCACCG CCGCCTACAT TTGCAGAGGC GGAGCGCAGA 
GCGGACTCGT CGAGTAGCGC ACCTTATGCT TGGCGGTCGC TCCATGTAGG CGCTGACTCT 
GAGCAGGCAT GCGTGGAAGT GCAGGCTCAG CTGCAAGGAG AGCTTGGCAT GGCTGTTACC 
TCGTCGCTAA TTGAGTGTGT CGACGAGGTA GACATGGCAA AGTTGCCGCC GTCGTTTGTC 
GCCAAGGCAC CGCTGCTCGT GTGGCTTGGG TGGCAGCTCC CCGGCTACGT GCACCGTGTG 
CAGGACATCC TCCTCTTCTT CTCGAGTCAC GTCGCCGCAC CGGCATCGGC GCTGGTTGTG 
GTGGTATGTC GCATGAGCTA CAAGGCCGCG TCCGCGCTGG GGCAACAGTG TGGGGTTTGG 
CTGGTGCAGA TGGCGCCATA CGTGAAGCAT GGGGCGGAGC AAGTCGCTGT ATTTGCGGAA 
GGAGCTCTGT GCGGTTCCTC TGCGCGACGA GAGGCGTTGA TCGGCGCAGA GGAAGGCGCC 
GTCGATGCAC GGAGAGCCGT GCTGCGCGCT ATGGCGACTC CGTCGTCGGG GTGTGCCGCT 
TTTACGCGCG CGCACGCGAC GCGCTCAGCC TTCCGCGCCG GCGCACAAAT GCGTACGTCC 
GTCGTCTCCG CCGTGTCTGC CGCCGTGGAC GGCCTCGACC TGGTGCCGGG TGTGTGGTCC 
GTGTATGCTT GGGCGTGGAG GGCGGAGCAC CGCGTCACGC TATGGATCGT TGCGGCGCTA 
CAGAACGCCT TTTGTTTCGC GTTGTGCGTA GTGCTGCAGC CGATTGCCCG ATCGCTGATC 
ATCGCCGCGC AAGACTGTGC GGCTCTGGCG CCCAAGCTCG TCGTTTTACT GCGCTGTCTG 
GGGCGAGCTA TTTCTCAGCT CCGCATCTTA ACCTACTTTG CACGCTGCTG CACTTTCATG 
TGGGCGCTGG AGAAGCGTGT GTGGCACTAC GAGTGGGCCG CGCTCGAGCT CGTACTGACC 
TTTCTCGTAG TCCAGTGCGA GACGGTGGCT TGTGTATTCG CCAAGCACAC TGTCGTGGGT 
GTTGGCTGGG CGAACAGTCT AGTGCGACAC TACAACGCCA CTTCCTTTTC TATTCACATA 
GCTGTAACCT TCCTTCAGAC GGCGCTTCTG GGGATCGCGA TGCGCAACGA GCTGCGCATG 
TTTGTCGTGG CAGAGCAGCA GCAAGCGCCG GCCCGCAACT TGTTTTCTCG CTACATGCCG 
AGCAGCTTGG CAACGTGGCT GCCGCCGAGC TCCTTTGCGA ATCATGTCAA CGGATTCTGG 
ATGCTGGTGC GTGCCCATCT CGTTGAGTGT GTGCGGTATT TCCTGCTGCA TGCAGTGGCT 
GCTTTGGTGC TAATCGGCCT GTCTGTGCTG CCCTTCGCCA GCAAGCTGTA TGCCCTGTCT 
CTTCGCTACC TGTTCCCTTG GCTGTCGTGT CAGTACTTCC TCGCCTTCTT CTCGCCCGAT 
CTACCGACGG TGCGACGCGT CGCGGTGTAC TTCGTCGGTC GCATGGCCGT TGCAGCGGTG 
CTGCAGGACA CTATCGGTGA TTTCATTTAC CGTGTGCTGA AAGACTTACT GATAGCCGTG 
GGACTAACCG GTGGTCTCGC GCTGCTGCTG TGGGGCTGGC CGCAGCGCGC GACGCTGGCA 
AAGCAGGTGG CGACGGCCAT CGCGGACAGC CTTCAGACTA CCCCAATGCC GGCGCGTGTG 
AGCGTGACAG CGGCTGCCGA CTGCAGCGAC GCAGGGTTGA GGGTCGCAGA GGAAGCCGCG 
GAAGACGAGG AGGCGCGGCA GCGGGACGTC TCTGTAGCAA AGCAAATCGA CCTTACCGAC 
GCCGCTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_35_1610 cDNA ORF clone, Leishmania infantum JPCM5

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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