LINJ_34_1580 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_34_1580
Entrez Gene ID	5072605
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001468492.2	XP_001468529.2	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_34_1580 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_34_1580 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc05884	XM_001468492.2 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_34_1580 ( XM_001468492.2 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001468529.2 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc05884
Clone ID Related Accession (Same CDS sequence)	XM_001468492.2
Accession Version	XM_001468492.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3006bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009418). On Jul 14, 2011 this sequence version replaced XM_001468492.1. COMPLETENESS: incomplete on both ends.

ATGCTGCCCC TTCGAGCTAC CCCGGTGCGC AAGGCTCCGG TTATCGTCCT CGAAGAGGCG 
AACCGAGCGC ATACAATCGA AACGGCGGCG TCGACGTATT CGGAGTTAGA GGCCTCGCCG 
GCGCCCGTTA CTTGGGGAAG CGAATCCACC TCTGCTTCGC CCTCGCCGGC CTCTGGCGCC 
AGCCATCATT CCTTTCACCC GATCCGAAAG ACGTTTGCTC GCTCGGTGGC GCCGACGACG 
AAGGCCGTGA AGCATTCCGC GCAGGCGAGC ACTATCGCTT CTCCCCCTGC CTCAGGTACG 
CAGCTCCTCA GCGCGTCGAC TAGAGAGTCT TCTTCACCGC CAGCGCCACC TTCTCCACTT 
TGCGGCATCA TAGACTTTTA CCGCGGCTCC TCTCCGTCAC CGCACCGACC CACGCAGTAT 
GCGGGTGGGG ACCCGAGAGA AAGCGAGCAA GCGGAACTGA AGAGCGCGGC TGGCAGTCGC 
GCAGGCCCGG AGTCCCCCTC GCTGTCGTCA TCTAGGGCGT CGGAGATGTT TTGTCGCAGC 
CCGGCCCCGG CGCGCTCGTA CATGGAGGAT TTGCTGGCCA TGACCGATGA GGACGGCAAC 
GGCGCGTTGC CGCAAGTGGA GACAGCGCCG GCCATGCGCG ACAGCAGCGG CGTAGGACAT 
GATTCCACCT CTCCTTCCCC GCGCGTAATC GGCTTGGCTC TCGACAACTC GCCGGTTGTG 
CCAGAGATGT GGGAAGAAAC GAGTTCCTCT GCGCCTACCT CCTCGACCGG CGTCTCGGAC 
GGGTTTGAGA AGGCGGAGGA GTCGCAGCTG CGGCACCGCA GTGTGTCCGT CGCGCGCATC 
CATTTCAGCT CCGCTTCGCC GAACTCTCCG CTGCCGGCTC AGCTGACCGC CTCCCCTATG 
AAATGGAGGC GGAGCGTGAA AGGCTCGCCT CCATCGCAGG CGAACGCTTC CGACGTACCG 
CAACGGTCTG CGGCCATGAT ACAAGAGAAG CATGCATCGT CGCCGATGGC GGACACAAAG 
GCAGCGTGGT CTGCAACGAT GTTTGCCACG AAAGCCAGAG TCGGCCTCAA CCGGAACAGC 
CGCAGCGGAG ATTTTGTGCA CCGCGAGGCG GTGGAGAGAG TTTTGCGCTT CCCAGCCGAT 
ACGACACAGG AGGAGGTTGC TCGCATCGAC TACGTGGATA ATGAGAAGGA TGGCAAGGGC 
GCAAAGATAG CCTCCGCCGC CTCGCAGGCT GCGCCCGTCG TCTCAGATGA CGTGGCTGGC 
CATTGCAGTG GACAAAGTCG AGTCCAGAGG TCGCCATATG TAGCGCCGCC GCTCTCTTCA 
CGACGACTTA GTGGTTTCCC GGCGTCGCCG CCCGTCGGCA CAGAGCGGCA CGTGATGATA 
CCGTCTTGTG CTAGTAGTGA AGCGAGCGTT CGCCGCGGCA CTTGGTTTGA CGGCCTTGGA 
GGGGGTCTAG TGTCTGCCCC TCGTGAGACA CGAACGGACA GTGCTTCGCC ATCAGTGCAC 
CGCTTTCTGG GCTGCAGCGC GCCTTACTTT CCCATGAATC GGTGGAATGT GGCACCTCCG 
CTGCTGCGGC GCGTAGAGGA AGAGGTGGCT GCCAGTGAGC CTCACCAGCC ACCGAATTGC 
TCGGCGAAGA AGCCGAGCGT GCGGGCCCTT CTCGCTAGGC TTTATCCATT TCCGTCTGCG 
TCGGCTCGCC GTGGCGCGGG TTCTGGCATT GTTTCTCATG ACAAGCGGTA TGCCTCGCAG 
ATGTCCCAAC GAACGGCTGA CGCACCACCG CCTCGGTGGA ACGCATCCAC CAAAATTCAC 
TGCGACCCGC TCACAGGGGG CATTGAGCTG GCGCGTGCGA GCAAACGCCA CTCGAGCGTC 
CGGCACGGCG GCCGAAGTGG GAGCAGCGAC GACTACGTGA GCGAGCGGCC CATCTCTTCA 
CCTCGTCGTC GCAGCAGGTC CGCCCCGGCA CAGGCGCCAC TGCACACACG CGCCTCGCTC 
TTGAGGCTGG AGGCGACGAA AGCACGTAAA GCGGCAGACG CAGCGCTTCA TGAAGAAGTG 
GCGTCGCCAC CATTTCATCC AACCGTCGCC CCGCATAGTG CGCGCATCTG CCGAGACAAA 
CTTCGTGAGC TGAAGAGCTC TCACGGTGCC GGTGTTGCTG CGGGTGCGGG TGCGGCGGCG 
CCAGCGCCAG GGACTCAGCT GGAGCAGGCA TCGCGGACAG AGAACTCTGA AAGCGCAGCC 
AAAGCATGGC ATGGCACCTC TAGGCAGGAT ATCGTGGGTG ACGCTGCAGT GGTGGCAGAC 
GTCTCCGTGT CGAGCTCAGA GGAGGTCGAT GCAGTGGCGA CTGCACGGGC AAAGGGCCCC 
TCATGCCCCT TAGTGGCAAC TTTACCCGCC AGACAACCGC CTCTGCCCCA GGTCGCAGAG 
CTGTGGGGAG CGAGTTCTAT CGACGGTGCA CGTATGTACG CAGACGCCGC TGCGCTACGA 
GAACGTAGAC AGGCAACGCA ACATCGTTGG CTACAAGAGA GGAAGCCGGA AGAGCAGCCG 
CATATGCAGA TGCACCCTCG CCGTGGTGCC TCCTCGTGTG CCGGGCGGCA GCCGACAGAG 
GATTTAGGCT GCCCGAAGCC ACCTCGTCCG CAAGTCTCCG CGGCCACAGA TCGCATTAGC 
ACCTCGACAC AGTGCGATCT GTTGCCCAGT GAGCGCACGG CGGGTCCTGA AAAAATGGCT 
GCTCCTGGTT TTGATTTGCA GCTGGGTGCC ACGCCCGTCT CCGTTGGCGC AGAGCATGCG 
CCACTGACTG CCGGTTTGCC GATGGCAACA CACACGGCGC TTCAGCGCGT GGACATGTAC 
AGCACAACGC CAACGGACGC ACTAAAGACC CGCGCCACGT CGTTGGAGAG GCAGCATCGC 
GTGGAAGACC AGCTACTGGA ACTCGAAACG GGCCGGCGAC GTCGACTGGG AATGTTGCGC 
CATCTCGCAA GCACGCGCGA CTCGCTGACC GGCGAACTCC TTTTCAAACC GTTCACGGGT 
CGTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001468529.2
CDS	1..3006
Translation	MLPLRATPVRKAPVIVLEEANRAHTIETAASTYSELEASPAPVTWGSESTSASPSPASGASHHSFHPIRKTFARSVAPTTKAVKHSAQASTIASPPASGTQLLSASTRESSSPPAPPSPLCGIIDFYRGSSPSPHRPTQYAGGDPRESEQAELKSAAGSRAGPESPSLSSSRASEMFCRSPAPARSYMEDLLAMTDEDGNGALPQVETAPAMRDSSGVGHDSTSPSPRVIGLALDNSPVVPEMWEETSSSAPTSSTGVSDGFEKAEESQLRHRSVSVARIHFSSASPNSPLPAQLTASPMKWRRSVKGSPPSQANASDVPQRSAAMIQEKHASSPMADTKAAWSATMFATKARVGLNRNSRSGDFVHREAVERVLRFPADTTQEEVARIDYVDNEKDGKGAKIASAASQAAPVVSDDVAGHCSGQSRVQRSPYVAPPLSSRRLSGFPASPPVGTERHVMIPSCASSEASVRRGTWFDGLGGGLVSAPRETRTDSASPSVHRFLGCSAPYFPMNRWNVAPPLLRRVEEEVAASEPHQPPNCSAKKPSVRALLARLYPFPSASARRGAGSGIVSHDKRYASQMSQRTADAPPPRWNASTKIHCDPLTGGIELARASKRHSSVRHGGRSGSSDDYVSERPISSPRRRSRSAPAQAPLHTRASLLRLEATKARKAADAALHEEVASPPFHPTVAPHSARICRDKLRELKSSHGAGVAAGAGAAAPAPGTQLEQASRTENSESAAKAWHGTSRQDIVGDAAVVADVSVSSSEEVDAVATARAKGPSCPLVATLPARQPPLPQVAELWGASSIDGARMYADAAALRERRQATQHRWLQERKPEEQPHMQMHPRRGASSCAGRQPTEDLGCPKPPRPQVSAATDRISTSTQCDLLPSERTAGPEKMAAPGFDLQLGATPVSVGAEHAPLTAGLPMATHTALQRVDMYSTTPTDALKTRATSLERQHRVEDQLLELETGRRRRLGMLRHLASTRDSLTGELLFKPFTGR

Target ORF information:

RefSeq Version	XM_001468492.2
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001468492.2

ORF Insert Sequence:

ATGCTGCCCC TTCGAGCTAC CCCGGTGCGC AAGGCTCCGG TTATCGTCCT CGAAGAGGCG 
AACCGAGCGC ATACAATCGA AACGGCGGCG TCGACGTATT CGGAGTTAGA GGCCTCGCCG 
GCGCCCGTTA CTTGGGGAAG CGAATCCACC TCTGCTTCGC CCTCGCCGGC CTCTGGCGCC 
AGCCATCATT CCTTTCACCC GATCCGAAAG ACGTTTGCTC GCTCGGTGGC GCCGACGACG 
AAGGCCGTGA AGCATTCCGC GCAGGCGAGC ACTATCGCTT CTCCCCCTGC CTCAGGTACG 
CAGCTCCTCA GCGCGTCGAC TAGAGAGTCT TCTTCACCGC CAGCGCCACC TTCTCCACTT 
TGCGGCATCA TAGACTTTTA CCGCGGCTCC TCTCCGTCAC CGCACCGACC CACGCAGTAT 
GCGGGTGGGG ACCCGAGAGA AAGCGAGCAA GCGGAACTGA AGAGCGCGGC TGGCAGTCGC 
GCAGGCCCGG AGTCCCCCTC GCTGTCGTCA TCTAGGGCGT CGGAGATGTT TTGTCGCAGC 
CCGGCCCCGG CGCGCTCGTA CATGGAGGAT TTGCTGGCCA TGACCGATGA GGACGGCAAC 
GGCGCGTTGC CGCAAGTGGA GACAGCGCCG GCCATGCGCG ACAGCAGCGG CGTAGGACAT 
GATTCCACCT CTCCTTCCCC GCGCGTAATC GGCTTGGCTC TCGACAACTC GCCGGTTGTG 
CCAGAGATGT GGGAAGAAAC GAGTTCCTCT GCGCCTACCT CCTCGACCGG CGTCTCGGAC 
GGGTTTGAGA AGGCGGAGGA GTCGCAGCTG CGGCACCGCA GTGTGTCCGT CGCGCGCATC 
CATTTCAGCT CCGCTTCGCC GAACTCTCCG CTGCCGGCTC AGCTGACCGC CTCCCCTATG 
AAATGGAGGC GGAGCGTGAA AGGCTCGCCT CCATCGCAGG CGAACGCTTC CGACGTACCG 
CAACGGTCTG CGGCCATGAT ACAAGAGAAG CATGCATCGT CGCCGATGGC GGACACAAAG 
GCAGCGTGGT CTGCAACGAT GTTTGCCACG AAAGCCAGAG TCGGCCTCAA CCGGAACAGC 
CGCAGCGGAG ATTTTGTGCA CCGCGAGGCG GTGGAGAGAG TTTTGCGCTT CCCAGCCGAT 
ACGACACAGG AGGAGGTTGC TCGCATCGAC TACGTGGATA ATGAGAAGGA TGGCAAGGGC 
GCAAAGATAG CCTCCGCCGC CTCGCAGGCT GCGCCCGTCG TCTCAGATGA CGTGGCTGGC 
CATTGCAGTG GACAAAGTCG AGTCCAGAGG TCGCCATATG TAGCGCCGCC GCTCTCTTCA 
CGACGACTTA GTGGTTTCCC GGCGTCGCCG CCCGTCGGCA CAGAGCGGCA CGTGATGATA 
CCGTCTTGTG CTAGTAGTGA AGCGAGCGTT CGCCGCGGCA CTTGGTTTGA CGGCCTTGGA 
GGGGGTCTAG TGTCTGCCCC TCGTGAGACA CGAACGGACA GTGCTTCGCC ATCAGTGCAC 
CGCTTTCTGG GCTGCAGCGC GCCTTACTTT CCCATGAATC GGTGGAATGT GGCACCTCCG 
CTGCTGCGGC GCGTAGAGGA AGAGGTGGCT GCCAGTGAGC CTCACCAGCC ACCGAATTGC 
TCGGCGAAGA AGCCGAGCGT GCGGGCCCTT CTCGCTAGGC TTTATCCATT TCCGTCTGCG 
TCGGCTCGCC GTGGCGCGGG TTCTGGCATT GTTTCTCATG ACAAGCGGTA TGCCTCGCAG 
ATGTCCCAAC GAACGGCTGA CGCACCACCG CCTCGGTGGA ACGCATCCAC CAAAATTCAC 
TGCGACCCGC TCACAGGGGG CATTGAGCTG GCGCGTGCGA GCAAACGCCA CTCGAGCGTC 
CGGCACGGCG GCCGAAGTGG GAGCAGCGAC GACTACGTGA GCGAGCGGCC CATCTCTTCA 
CCTCGTCGTC GCAGCAGGTC CGCCCCGGCA CAGGCGCCAC TGCACACACG CGCCTCGCTC 
TTGAGGCTGG AGGCGACGAA AGCACGTAAA GCGGCAGACG CAGCGCTTCA TGAAGAAGTG 
GCGTCGCCAC CATTTCATCC AACCGTCGCC CCGCATAGTG CGCGCATCTG CCGAGACAAA 
CTTCGTGAGC TGAAGAGCTC TCACGGTGCC GGTGTTGCTG CGGGTGCGGG TGCGGCGGCG 
CCAGCGCCAG GGACTCAGCT GGAGCAGGCA TCGCGGACAG AGAACTCTGA AAGCGCAGCC 
AAAGCATGGC ATGGCACCTC TAGGCAGGAT ATCGTGGGTG ACGCTGCAGT GGTGGCAGAC 
GTCTCCGTGT CGAGCTCAGA GGAGGTCGAT GCAGTGGCGA CTGCACGGGC AAAGGGCCCC 
TCATGCCCCT TAGTGGCAAC TTTACCCGCC AGACAACCGC CTCTGCCCCA GGTCGCAGAG 
CTGTGGGGAG CGAGTTCTAT CGACGGTGCA CGTATGTACG CAGACGCCGC TGCGCTACGA 
GAACGTAGAC AGGCAACGCA ACATCGTTGG CTACAAGAGA GGAAGCCGGA AGAGCAGCCG 
CATATGCAGA TGCACCCTCG CCGTGGTGCC TCCTCGTGTG CCGGGCGGCA GCCGACAGAG 
GATTTAGGCT GCCCGAAGCC ACCTCGTCCG CAAGTCTCCG CGGCCACAGA TCGCATTAGC 
ACCTCGACAC AGTGCGATCT GTTGCCCAGT GAGCGCACGG CGGGTCCTGA AAAAATGGCT 
GCTCCTGGTT TTGATTTGCA GCTGGGTGCC ACGCCCGTCT CCGTTGGCGC AGAGCATGCG 
CCACTGACTG CCGGTTTGCC GATGGCAACA CACACGGCGC TTCAGCGCGT GGACATGTAC 
AGCACAACGC CAACGGACGC ACTAAAGACC CGCGCCACGT CGTTGGAGAG GCAGCATCGC 
GTGGAAGACC AGCTACTGGA ACTCGAAACG GGCCGGCGAC GTCGACTGGG AATGTTGCGC 
CATCTCGCAA GCACGCGCGA CTCGCTGACC GGCGAACTCC TTTTCAAACC GTTCACGGGT 
CGTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_34_1580 cDNA ORF clone, Leishmania infantum JPCM5

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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