LINJ_31_0660 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_31_0660
Entrez Gene ID	5071375
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001467289.1	XP_001467326.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_31_0660 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_31_0660 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc04789	XM_001467289.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_31_0660 ( XM_001467289.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001467326.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

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CloneID	OLc04789
Clone ID Related Accession (Same CDS sequence)	XM_001467289.1
Accession Version	XM_001467289.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3039bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009415). COMPLETENESS: incomplete on both ends.

ATGTGTTGCG CAGCCAACTG TGTCTCCGTT GCACGCCGCC GCCTTGAATG CGTTCTCTCT 
CTCTCTCTCT GGATGCGCAT GTCGCACTGT CCCCCGAACG GTGCCACCCA CCCATCGACA 
TGGTCATTCT TCGCTTGCTT TCCTCTCTGC CGGCTCACCT ACTCTCACCA GATTTGCATT 
TCTATCGCTT TCTTGACAGC GATGAAGCGG TTTTCAATGG CGCCGGCGCT GCGGGCTGTC 
GCACCGCCGT CGCCCGGCGC CTTCGCATGC CTTTCCGTAT CGTGCGGCTG CGCCTCTCAC 
TACCAGAAGC GGTGGGCCGG GACGCAGCGA CGCGTCATCC GGCCCACTGA AGAAAGCGTC 
GCCGAACTGA TGGAGGATGC CGATGAAGAG GGTGCTTGCA TCAGCACTGT CAGTGTCTCG 
TCCTTCGCCG CCCCCGCGCC GCTTTCGGCC ATCTCAGAGT CCGCGGCGCT CTACCGGAGG 
GTGGCAGCAG CGGGTTTTGA CGGCAAAGCG GCGCAGGCAG CGAAAAGACG CCGCAGCGGC 
CATGCCGGTG ACGGCGATGC AAGTGCCACG GATGATGCCG CGCCTACAAA AACTACTCAC 
GATGCAGTCG AGGCAGAGGC GCTCGCGGGG ACCTCCGCAG GCGATGGCGA CGACGCTGTC 
GTCGAGGAGG CGAGAGGGGA CGAGACGTAC ATCCTTCAGC AGCAGCAGTA CTACTACGAG 
CTTCCCGTGC AGCCGCTTAC CGATATCGCA ACCGCCTACT TGCGCTCTAC AGAGAACATT 
GTCCTCGTGT CGCCGCAGGA GGAGCACATC CTGTTTCCTG TTCTTATGGA GCGCCTGCAG 
GAGTTCCACG TATCACAGCT GCTGGACATT GTCGACAGTC ACTGGAGTCG GTCTACCATG 
CTTCGCTACG GCACCCAGTA CAAGGATATG GTGCGTGACC GCATTGCTCA GCTCGCCACC 
GCCGCGGCGA CGCAGTTGGA GGCGAAGAGG AGGAGGCAGC AGGAGCAGCA GTCGTCTTCC 
AGCGCGGCAG AGTCGACGTC CGCCGCTGCC GGCGCATTTG GGGCGACGGG GAGAGGTGAG 
GGTCACAGTA CGAAGGCTAG GGGTGCCAGC GAGGAGTGCG AGGATGACGG CGCCGTGTTC 
GTGGCCGAGA AACAGGCAGC CGATGCGCAG CGCTCTGCTG ACGCTATTCT GGCTCACGCC 
GAGAAGGAGA TTACGTCCGC GACGGTGTAC CGCGCCTTGG TGGTCATGGG AATCAGCGCG 
GGGCACCGTA AGCGCGACTT GGCCTTTTTC CAACTCCTCG GCAACTACTT AACCTTCTTT 
ATCAACGACT ATCGCGACCC GCATGAGCTT GTACGCGTAC TGACGGCGCT GGCGCGCGCG 
AAGATAGTGC CGTCACCGGC GTTCCTCAAC ATGATTGCGC GCCGCATGCC GGTGCTGCAC 
AAGCGCATCC CACTGGAGCC GCTGCCGGCC TATCGCGCTC TCTCCAACTT TGCACGGATG 
GGGCACACCT CTATGAACAC GTTCCGCTTC CTCGCGGACT GCATGTTTGC CCACGTGGAA 
AAGCACATCA GCGAGGAGAA GAAGCAGCTC ACCACAATGG CAGCCGCATC AAAGAAGCCT 
GCAGCTGCGA CAGAGGAGTC CGATGCGAAG ACAGCTCCAT CTACCGCCTC GGGCTCCGCA 
GCCTGCATGG ATCGCGCGCA GAGGTGCAGC CAAGAGGTGC TGGAAAAGGA GCGACTGCGT 
CGCATGTGCG GGCTGAAGCC GTCTATGTTC ACAAGGTGGC TCGCCATCCT CGCTCGCTTC 
AACGCTCCGC ATCAGCAGTA CCTGCGCCCT CTCATCAAGC CGGTCATCTT GCCGATGCTA 
CCGTACTTCC CACCACCAAG CTTCACTCGG CTGGTGAGCA CGACGCGTGT GTTCAGGTCA 
ACCGATCGCG CTCTCGTGGA CGCGCTGGTG GGGCGGGTGT GCGATGTGCT CGCGCCAGCC 
GGCAAGCTGA CACGCGTGGA TGCGATGGAG TTGCTGCGGC TCATCTCTCA GGATGACACC 
CCCGTGCCTA CTCAACTGGA TCGCGTCCTC CAGATATGCA AGGACTACCT TGGGAGCTCG 
ACAAGCACCT ACACGATGGA AGAGGTGGCT CCGAGCAGCG CCGAGCGGAG CGCAGCTCCG 
CGGCCACGCG GCACAGTCAC GGTTGTGCCG CGTCCGCGAG ACATGTGCAA CGTGGTGAAG 
CTGATCGGCT GCTTTCAGAA GCGGGATGAG ATCCCGCTCG AGTCCCTCAC CCCGCTGCTG 
GAGCTGACGG AGGACTTTGC AAAGCGCCTC GCGCATCTGA TGGAGCTGTG CGTTGTGTCA 
CTGACGCAGG TGGATGCGTT TCTGGAGCTG TGCCAGCGGC ACCAAATTCC AGATGTATCG 
GGGGCGTTGG AGCAGCTAAT GCGGAAGCGA CGGGATGTGG TGCTGCAAGC CAAGCGCTCT 
CCAGAAGCGG CGGCGGAGGA TAGGGGCGGC AGAGGCAGCG CCACCGACGA TGAGGAGGCC 
GAGGAGGCGT ACTACGGCCA GCTGGACATC GACGTGCGCG AGACGTTCAA CAAGATTCTC 
CTTACAAACG ACTGGAATAC CCACTGCCGC TACAGACCAC TGCCTGGTCC GCTGCAGGTG 
GACTTCCGCA ACGAGCTCAC CAAGGTGTCT GCTCTCGAGC TTCTTCAGGC GGTGGACTTG 
TTTGCCAAAG CGTGCCCAGG TGCTCTGCAA GACGCGCCAC GGCTCTTTCT CAGCCGCAGC 
CTACTAGAGA AGCTCGGTAA AGAGGGCGAG GTGGTGGTGG AGGAGGCAAC GAACAGCCTT 
GTTATTCGCC AACCCCGTGC CGAGCTTCTT ACTCGCGAGG ATTTACAAAC GTTCACGGCG 
CTGGTGGAGC GGACACCGCT GGAGGCAGTG CGCACCTCTC CGGTTGTGTG GGTGTTCATC 
AAAGAGAAGG CCGAAAGACT CGGCTTGACT TCCGTCGAGG CAACGGCCAC GGCGCGCCTC 
ACCGAACTGC ATGGCATGGC GCGGAGAGCG TATGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001467326.1
CDS	1..3039
Translation	MCCAANCVSVARRRLECVLSLSLWMRMSHCPPNGATHPSTWSFFACFPLCRLTYSHQICISIAFLTAMKRFSMAPALRAVAPPSPGAFACLSVSCGCASHYQKRWAGTQRRVIRPTEESVAELMEDADEEGACISTVSVSSFAAPAPLSAISESAALYRRVAAAGFDGKAAQAAKRRRSGHAGDGDASATDDAAPTKTTHDAVEAEALAGTSAGDGDDAVVEEARGDETYILQQQQYYYELPVQPLTDIATAYLRSTENIVLVSPQEEHILFPVLMERLQEFHVSQLLDIVDSHWSRSTMLRYGTQYKDMVRDRIAQLATAAATQLEAKRRRQQEQQSSSSAAESTSAAAGAFGATGRGEGHSTKARGASEECEDDGAVFVAEKQAADAQRSADAILAHAEKEITSATVYRALVVMGISAGHRKRDLAFFQLLGNYLTFFINDYRDPHELVRVLTALARAKIVPSPAFLNMIARRMPVLHKRIPLEPLPAYRALSNFARMGHTSMNTFRFLADCMFAHVEKHISEEKKQLTTMAAASKKPAAATEESDAKTAPSTASGSAACMDRAQRCSQEVLEKERLRRMCGLKPSMFTRWLAILARFNAPHQQYLRPLIKPVILPMLPYFPPPSFTRLVSTTRVFRSTDRALVDALVGRVCDVLAPAGKLTRVDAMELLRLISQDDTPVPTQLDRVLQICKDYLGSSTSTYTMEEVAPSSAERSAAPRPRGTVTVVPRPRDMCNVVKLIGCFQKRDEIPLESLTPLLELTEDFAKRLAHLMELCVVSLTQVDAFLELCQRHQIPDVSGALEQLMRKRRDVVLQAKRSPEAAAEDRGGRGSATDDEEAEEAYYGQLDIDVRETFNKILLTNDWNTHCRYRPLPGPLQVDFRNELTKVSALELLQAVDLFAKACPGALQDAPRLFLSRSLLEKLGKEGEVVVEEATNSLVIRQPRAELLTREDLQTFTALVERTPLEAVRTSPVVWVFIKEKAERLGLTSVEATATARLTELHGMARRAYA

Target ORF information:

RefSeq Version	XM_001467289.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001467289.1

ORF Insert Sequence:

ATGTGTTGCG CAGCCAACTG TGTCTCCGTT GCACGCCGCC GCCTTGAATG CGTTCTCTCT 
CTCTCTCTCT GGATGCGCAT GTCGCACTGT CCCCCGAACG GTGCCACCCA CCCATCGACA 
TGGTCATTCT TCGCTTGCTT TCCTCTCTGC CGGCTCACCT ACTCTCACCA GATTTGCATT 
TCTATCGCTT TCTTGACAGC GATGAAGCGG TTTTCAATGG CGCCGGCGCT GCGGGCTGTC 
GCACCGCCGT CGCCCGGCGC CTTCGCATGC CTTTCCGTAT CGTGCGGCTG CGCCTCTCAC 
TACCAGAAGC GGTGGGCCGG GACGCAGCGA CGCGTCATCC GGCCCACTGA AGAAAGCGTC 
GCCGAACTGA TGGAGGATGC CGATGAAGAG GGTGCTTGCA TCAGCACTGT CAGTGTCTCG 
TCCTTCGCCG CCCCCGCGCC GCTTTCGGCC ATCTCAGAGT CCGCGGCGCT CTACCGGAGG 
GTGGCAGCAG CGGGTTTTGA CGGCAAAGCG GCGCAGGCAG CGAAAAGACG CCGCAGCGGC 
CATGCCGGTG ACGGCGATGC AAGTGCCACG GATGATGCCG CGCCTACAAA AACTACTCAC 
GATGCAGTCG AGGCAGAGGC GCTCGCGGGG ACCTCCGCAG GCGATGGCGA CGACGCTGTC 
GTCGAGGAGG CGAGAGGGGA CGAGACGTAC ATCCTTCAGC AGCAGCAGTA CTACTACGAG 
CTTCCCGTGC AGCCGCTTAC CGATATCGCA ACCGCCTACT TGCGCTCTAC AGAGAACATT 
GTCCTCGTGT CGCCGCAGGA GGAGCACATC CTGTTTCCTG TTCTTATGGA GCGCCTGCAG 
GAGTTCCACG TATCACAGCT GCTGGACATT GTCGACAGTC ACTGGAGTCG GTCTACCATG 
CTTCGCTACG GCACCCAGTA CAAGGATATG GTGCGTGACC GCATTGCTCA GCTCGCCACC 
GCCGCGGCGA CGCAGTTGGA GGCGAAGAGG AGGAGGCAGC AGGAGCAGCA GTCGTCTTCC 
AGCGCGGCAG AGTCGACGTC CGCCGCTGCC GGCGCATTTG GGGCGACGGG GAGAGGTGAG 
GGTCACAGTA CGAAGGCTAG GGGTGCCAGC GAGGAGTGCG AGGATGACGG CGCCGTGTTC 
GTGGCCGAGA AACAGGCAGC CGATGCGCAG CGCTCTGCTG ACGCTATTCT GGCTCACGCC 
GAGAAGGAGA TTACGTCCGC GACGGTGTAC CGCGCCTTGG TGGTCATGGG AATCAGCGCG 
GGGCACCGTA AGCGCGACTT GGCCTTTTTC CAACTCCTCG GCAACTACTT AACCTTCTTT 
ATCAACGACT ATCGCGACCC GCATGAGCTT GTACGCGTAC TGACGGCGCT GGCGCGCGCG 
AAGATAGTGC CGTCACCGGC GTTCCTCAAC ATGATTGCGC GCCGCATGCC GGTGCTGCAC 
AAGCGCATCC CACTGGAGCC GCTGCCGGCC TATCGCGCTC TCTCCAACTT TGCACGGATG 
GGGCACACCT CTATGAACAC GTTCCGCTTC CTCGCGGACT GCATGTTTGC CCACGTGGAA 
AAGCACATCA GCGAGGAGAA GAAGCAGCTC ACCACAATGG CAGCCGCATC AAAGAAGCCT 
GCAGCTGCGA CAGAGGAGTC CGATGCGAAG ACAGCTCCAT CTACCGCCTC GGGCTCCGCA 
GCCTGCATGG ATCGCGCGCA GAGGTGCAGC CAAGAGGTGC TGGAAAAGGA GCGACTGCGT 
CGCATGTGCG GGCTGAAGCC GTCTATGTTC ACAAGGTGGC TCGCCATCCT CGCTCGCTTC 
AACGCTCCGC ATCAGCAGTA CCTGCGCCCT CTCATCAAGC CGGTCATCTT GCCGATGCTA 
CCGTACTTCC CACCACCAAG CTTCACTCGG CTGGTGAGCA CGACGCGTGT GTTCAGGTCA 
ACCGATCGCG CTCTCGTGGA CGCGCTGGTG GGGCGGGTGT GCGATGTGCT CGCGCCAGCC 
GGCAAGCTGA CACGCGTGGA TGCGATGGAG TTGCTGCGGC TCATCTCTCA GGATGACACC 
CCCGTGCCTA CTCAACTGGA TCGCGTCCTC CAGATATGCA AGGACTACCT TGGGAGCTCG 
ACAAGCACCT ACACGATGGA AGAGGTGGCT CCGAGCAGCG CCGAGCGGAG CGCAGCTCCG 
CGGCCACGCG GCACAGTCAC GGTTGTGCCG CGTCCGCGAG ACATGTGCAA CGTGGTGAAG 
CTGATCGGCT GCTTTCAGAA GCGGGATGAG ATCCCGCTCG AGTCCCTCAC CCCGCTGCTG 
GAGCTGACGG AGGACTTTGC AAAGCGCCTC GCGCATCTGA TGGAGCTGTG CGTTGTGTCA 
CTGACGCAGG TGGATGCGTT TCTGGAGCTG TGCCAGCGGC ACCAAATTCC AGATGTATCG 
GGGGCGTTGG AGCAGCTAAT GCGGAAGCGA CGGGATGTGG TGCTGCAAGC CAAGCGCTCT 
CCAGAAGCGG CGGCGGAGGA TAGGGGCGGC AGAGGCAGCG CCACCGACGA TGAGGAGGCC 
GAGGAGGCGT ACTACGGCCA GCTGGACATC GACGTGCGCG AGACGTTCAA CAAGATTCTC 
CTTACAAACG ACTGGAATAC CCACTGCCGC TACAGACCAC TGCCTGGTCC GCTGCAGGTG 
GACTTCCGCA ACGAGCTCAC CAAGGTGTCT GCTCTCGAGC TTCTTCAGGC GGTGGACTTG 
TTTGCCAAAG CGTGCCCAGG TGCTCTGCAA GACGCGCCAC GGCTCTTTCT CAGCCGCAGC 
CTACTAGAGA AGCTCGGTAA AGAGGGCGAG GTGGTGGTGG AGGAGGCAAC GAACAGCCTT 
GTTATTCGCC AACCCCGTGC CGAGCTTCTT ACTCGCGAGG ATTTACAAAC GTTCACGGCG 
CTGGTGGAGC GGACACCGCT GGAGGCAGTG CGCACCTCTC CGGTTGTGTG GGTGTTCATC 
AAAGAGAAGG CCGAAAGACT CGGCTTGACT TCCGTCGAGG CAACGGCCAC GGCGCGCCTC 
ACCGAACTGC ATGGCATGGC GCGGAGAGCG TATGCCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_31_0660 cDNA ORF clone, Leishmania infantum JPCM5

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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