LINJ_30_3170 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_30_3170
Entrez Gene ID	5071209
Full Name	putative valyl-tRNA synthetase
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001467126.1	XP_001467163.1	putative valyl-tRNA synthetase

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_30_3170 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_30_3170 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc04684	XM_001467126.1 Latest version!	Leishmania infantum JPCM5 putative valyl-tRNA synthetase partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_30_3170 ( XM_001467126.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001467163.1 Leishmania infantum JPCM5 putative valyl-tRNA synthetase partial mRNA.

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CloneID	OLc04684
Clone ID Related Accession (Same CDS sequence)	XM_001467126.1
Accession Version	XM_001467126.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2904bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	putative valyl-tRNA synthetase
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009414). COMPLETENESS: incomplete on both ends.

ATGGCGGCCA CGTACGATCC GGCCGCGGTG GAGGCGGACT GGTATCCGTG GTGGGAGAAG 
TCTGGCTTCT TCAGACCCGC CTCAGACCAC AAGTCCGAGA CGGCGACCAA GCCGTTCGTG 
ATTATCGCCC CACCACCGAA CGTCACGGGC TACCTGCACC TGGGCCATGC CCTCACGGGC 
GCTGTGCAGG ACACCCTCAT CCGCTTCCAC CGCATGAAGG GTGACAACAC CCTCTACTTG 
CCCGGCACCG ACCACGCCGG CATCGCCACC CAGGTCGTCG TGGAGCGCCG CGTCATGAAG 
GAGGAGGGCA AGAGCCGGCA CGACCTCGGC CGCGACGAGT TCATGAAGCG CCTGTGGGAA 
TTCAAGAAGA ATCACGCTGG CATGATCACG GAGCAGTTCC GCAGGATCGG CTTGTCGCTG 
GACTGGACGC GCGAGCGCTT TACGATGGAC GAACAGTCGT CTGCGGCTGT TGTGGAGGCG 
TTTGTGCGCC TGCACGAGGA CGGCCTGGTG CACCGCGACA CACGGCTGGT AAACTGGTGC 
TGCGCGCTGC AGAGCGCCAT CTCTGACCTC GAGGTGGAGT TTGTCGAAGT GCCCAAGACA 
TCCAAGATGA CCATTCCTCT CTATGACCGC AAAGTCGACA TGGGCAGCCT CACTCACGTT 
GCCTACAAGC TGGCGGACAG CGACGACGAG CTGGTGATTG CGACGACGCG TCCTGAGACG 
CTGCTGGGCG ATACGGCCGT CGCCATTCAC CCTGACGACG AGCGCTACAA GAAGTTCCAT 
GGCAAGTTCC TCAAGTGCCC GTTCCGCGAC GACATCATCC CGATCGTGCT GGACGCGACG 
CTGGTCGACA TGAACTTCGG CACCGGCGCG GTGAAAATCA CCCCAGCTCA CGACCCAAAC 
GACTTTGAGT CCGGCAAGCG CCACAACCTG CAGCAGCTTG TCATGATGAA CCTGAAGGGC 
TACGTGACGA TGGAGCCGTT CAAGGGCATG CACCGCTTCG ACTGCCGCCG CGAGATCGTG 
AAGAAGCTGG AGGAGATGGG GCTGCTGCGC GGCGTGGAGC CGTACGAGTA CCGCGTAGGC 
CGCTGCGAGC GCACTGGCGA CATTGTGGAG CCGATGCTGA TGCCGCAGTG GTTCATCGAC 
TGCTCCGATA TGGCCCGCCG CTCCGTCGAG GCGGTGCGCA ACGGCGACCT GCGCCTGTAC 
CCGCCTTCGC ACGAGGCCGT CTGGTACCAC TGGCTGGAGA ACATCAAACC GTGGTGCGTG 
TCGCGTCAGC TCTGGTGGGG CCACCGCATT CCTGCCTACA AAGTTGTCGG CTCGCTGCCG 
AAAGACGTGG ACCCATGGGT GGTCGCCCGC AATCTGCAGG AGGCGCACGC GAAGGCTAAG 
AAGAAGTTCG GCCTGACTGA CGAGCAGGTC GCCGAGGCCT CGTTTGAGCA GGACCCGGAT 
GTGCTGGACA CCTGGTTCAG CTCCGGACTC TGGCCCTTCG CCACGCTTGG ATGGCCCACC 
GACTCGGACG ACATGAAGCG CTTCTTCCCG AACTCGCTGA TGGAGACCGG CCACGACATC 
CTGTTCTTCT GGGTGGCTCG CATGGTAATG CTTTCGCTGC ACTTCACAAA CAAGCTGCCG 
TACAAGGAGG TGTTTCTGCA CGCAATGGTG CGCGACAAGA ATGGCGAGAA GATGTCCAAG 
TCGAAGGGCA ACGTCATCGA CCCACTCTAC GTCATCCACG GCGTTTCGCT GCAGACCCTC 
CACAACACCG TGCGCAGCGG CAACCTGGGC GACAAGGAGG TGGAGAAGGC CATCAAGCAG 
CAGAAGGAGT TTTTCCCAGA AGGCATTCCA GAGTGCGGTA GCGATGCCCT GCGCTTCGGC 
CTCCTCTCCT ACACCCAGTC TGGCCGCAGC GTGAACCTCG ACATCCAACG CGTCGTGGCC 
TACCGCCAGT TCTGCAACAA GCTGTGGAAC GTGGTGCGCT ACGTGCTGTA TCACGCCCTG 
GGCACTGACT ACGTGCCCAG CAAGCAGCAG TTCAGCCCCG CCGAGGACGC CGCCATGCTG 
CCGCTCGAGT GCCGCTGGAT TCTCTCGCGC CTCGACGCCG CCATCGCGGA GGCCACGCAG 
GGCATGTCGG AGGGCCTCTA CGACTTCGCG TTGGCCACCG GTGCCGTCTA CCGCTTCTGG 
CTGCACGAGC TGTGCGACGT GTTCCTTGAG TTGACGAAGC CGACCATTCA GAAGGGCGGA 
GAGAAGCAGC AGCTGGTGCA AGACGTGCTG CTGCACGTCG TCGAGAAGGC GCTTCGGCTG 
CTACACCCGA TGATGCCGTT TCTCACGGAG GAGCTTTGGC ACCGCCTGCC CAACTACAGC 
AGCTTCGGCA GCGAGTCGAT CATGCTCGCC AAGTACCCGA CACCGAGCGG ATGGTTGAGC 
GCGGCGTCGG ATAGCGCCAT GTCGATCATT CTCGACGTCG TGCACAGCGT ACGTTCCACC 
AAGGCCTCGT ACTCGCTAAC GAACAAGCAC AAGCCAGACG TGTGGGTGAC GGCGCATACG 
GCGGAGCTGC AGGAGCTGTT CGCGGCGGAA AAGATGATGA TCTCAACCCT CGGTGTCGTG 
GGCGAGGTGA CTGTCGTGTC CCCGGCCGAG GAGACAGCGG CGGTGCCGAA GGGCTGCGGC 
TTCTCCGTGG TGACAAAGGA GGTGGGCGTG AACATGATGC TCATGGGTTT CATCGACGTC 
GGGAAGGAGG TGGCGAAGCT GGAGAAGCAG CTGGACGGCC TCATGAAGCA GATTGAGGGA 
ATGAAGAAGA AGATGTCTAT CCCTAATTAC GAAACTAAGG TGCCGGCCGA GATCCGCGTG 
ACCAACACGG AGAAGCTCAA GACGCTAGAG GCGCAGAGCG CGCAGCTGCG CGATGGCATC 
GAGAAGATGA GCAGCCTCAA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001467163.1
CDS	1..2904
Translation	MAATYDPAAVEADWYPWWEKSGFFRPASDHKSETATKPFVIIAPPPNVTGYLHLGHALTGAVQDTLIRFHRMKGDNTLYLPGTDHAGIATQVVVERRVMKEEGKSRHDLGRDEFMKRLWEFKKNHAGMITEQFRRIGLSLDWTRERFTMDEQSSAAVVEAFVRLHEDGLVHRDTRLVNWCCALQSAISDLEVEFVEVPKTSKMTIPLYDRKVDMGSLTHVAYKLADSDDELVIATTRPETLLGDTAVAIHPDDERYKKFHGKFLKCPFRDDIIPIVLDATLVDMNFGTGAVKITPAHDPNDFESGKRHNLQQLVMMNLKGYVTMEPFKGMHRFDCRREIVKKLEEMGLLRGVEPYEYRVGRCERTGDIVEPMLMPQWFIDCSDMARRSVEAVRNGDLRLYPPSHEAVWYHWLENIKPWCVSRQLWWGHRIPAYKVVGSLPKDVDPWVVARNLQEAHAKAKKKFGLTDEQVAEASFEQDPDVLDTWFSSGLWPFATLGWPTDSDDMKRFFPNSLMETGHDILFFWVARMVMLSLHFTNKLPYKEVFLHAMVRDKNGEKMSKSKGNVIDPLYVIHGVSLQTLHNTVRSGNLGDKEVEKAIKQQKEFFPEGIPECGSDALRFGLLSYTQSGRSVNLDIQRVVAYRQFCNKLWNVVRYVLYHALGTDYVPSKQQFSPAEDAAMLPLECRWILSRLDAAIAEATQGMSEGLYDFALATGAVYRFWLHELCDVFLELTKPTIQKGGEKQQLVQDVLLHVVEKALRLLHPMMPFLTEELWHRLPNYSSFGSESIMLAKYPTPSGWLSAASDSAMSIILDVVHSVRSTKASYSLTNKHKPDVWVTAHTAELQELFAAEKMMISTLGVVGEVTVVSPAEETAAVPKGCGFSVVTKEVGVNMMLMGFIDVGKEVAKLEKQLDGLMKQIEGMKKKMSIPNYETKVPAEIRVTNTEKLKTLEAQSAQLRDGIEKMSSLK

Target ORF information:

RefSeq Version	XM_001467126.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 putative valyl-tRNA synthetase partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001467126.1

ORF Insert Sequence:

ATGGCGGCCA CGTACGATCC GGCCGCGGTG GAGGCGGACT GGTATCCGTG GTGGGAGAAG 
TCTGGCTTCT TCAGACCCGC CTCAGACCAC AAGTCCGAGA CGGCGACCAA GCCGTTCGTG 
ATTATCGCCC CACCACCGAA CGTCACGGGC TACCTGCACC TGGGCCATGC CCTCACGGGC 
GCTGTGCAGG ACACCCTCAT CCGCTTCCAC CGCATGAAGG GTGACAACAC CCTCTACTTG 
CCCGGCACCG ACCACGCCGG CATCGCCACC CAGGTCGTCG TGGAGCGCCG CGTCATGAAG 
GAGGAGGGCA AGAGCCGGCA CGACCTCGGC CGCGACGAGT TCATGAAGCG CCTGTGGGAA 
TTCAAGAAGA ATCACGCTGG CATGATCACG GAGCAGTTCC GCAGGATCGG CTTGTCGCTG 
GACTGGACGC GCGAGCGCTT TACGATGGAC GAACAGTCGT CTGCGGCTGT TGTGGAGGCG 
TTTGTGCGCC TGCACGAGGA CGGCCTGGTG CACCGCGACA CACGGCTGGT AAACTGGTGC 
TGCGCGCTGC AGAGCGCCAT CTCTGACCTC GAGGTGGAGT TTGTCGAAGT GCCCAAGACA 
TCCAAGATGA CCATTCCTCT CTATGACCGC AAAGTCGACA TGGGCAGCCT CACTCACGTT 
GCCTACAAGC TGGCGGACAG CGACGACGAG CTGGTGATTG CGACGACGCG TCCTGAGACG 
CTGCTGGGCG ATACGGCCGT CGCCATTCAC CCTGACGACG AGCGCTACAA GAAGTTCCAT 
GGCAAGTTCC TCAAGTGCCC GTTCCGCGAC GACATCATCC CGATCGTGCT GGACGCGACG 
CTGGTCGACA TGAACTTCGG CACCGGCGCG GTGAAAATCA CCCCAGCTCA CGACCCAAAC 
GACTTTGAGT CCGGCAAGCG CCACAACCTG CAGCAGCTTG TCATGATGAA CCTGAAGGGC 
TACGTGACGA TGGAGCCGTT CAAGGGCATG CACCGCTTCG ACTGCCGCCG CGAGATCGTG 
AAGAAGCTGG AGGAGATGGG GCTGCTGCGC GGCGTGGAGC CGTACGAGTA CCGCGTAGGC 
CGCTGCGAGC GCACTGGCGA CATTGTGGAG CCGATGCTGA TGCCGCAGTG GTTCATCGAC 
TGCTCCGATA TGGCCCGCCG CTCCGTCGAG GCGGTGCGCA ACGGCGACCT GCGCCTGTAC 
CCGCCTTCGC ACGAGGCCGT CTGGTACCAC TGGCTGGAGA ACATCAAACC GTGGTGCGTG 
TCGCGTCAGC TCTGGTGGGG CCACCGCATT CCTGCCTACA AAGTTGTCGG CTCGCTGCCG 
AAAGACGTGG ACCCATGGGT GGTCGCCCGC AATCTGCAGG AGGCGCACGC GAAGGCTAAG 
AAGAAGTTCG GCCTGACTGA CGAGCAGGTC GCCGAGGCCT CGTTTGAGCA GGACCCGGAT 
GTGCTGGACA CCTGGTTCAG CTCCGGACTC TGGCCCTTCG CCACGCTTGG ATGGCCCACC 
GACTCGGACG ACATGAAGCG CTTCTTCCCG AACTCGCTGA TGGAGACCGG CCACGACATC 
CTGTTCTTCT GGGTGGCTCG CATGGTAATG CTTTCGCTGC ACTTCACAAA CAAGCTGCCG 
TACAAGGAGG TGTTTCTGCA CGCAATGGTG CGCGACAAGA ATGGCGAGAA GATGTCCAAG 
TCGAAGGGCA ACGTCATCGA CCCACTCTAC GTCATCCACG GCGTTTCGCT GCAGACCCTC 
CACAACACCG TGCGCAGCGG CAACCTGGGC GACAAGGAGG TGGAGAAGGC CATCAAGCAG 
CAGAAGGAGT TTTTCCCAGA AGGCATTCCA GAGTGCGGTA GCGATGCCCT GCGCTTCGGC 
CTCCTCTCCT ACACCCAGTC TGGCCGCAGC GTGAACCTCG ACATCCAACG CGTCGTGGCC 
TACCGCCAGT TCTGCAACAA GCTGTGGAAC GTGGTGCGCT ACGTGCTGTA TCACGCCCTG 
GGCACTGACT ACGTGCCCAG CAAGCAGCAG TTCAGCCCCG CCGAGGACGC CGCCATGCTG 
CCGCTCGAGT GCCGCTGGAT TCTCTCGCGC CTCGACGCCG CCATCGCGGA GGCCACGCAG 
GGCATGTCGG AGGGCCTCTA CGACTTCGCG TTGGCCACCG GTGCCGTCTA CCGCTTCTGG 
CTGCACGAGC TGTGCGACGT GTTCCTTGAG TTGACGAAGC CGACCATTCA GAAGGGCGGA 
GAGAAGCAGC AGCTGGTGCA AGACGTGCTG CTGCACGTCG TCGAGAAGGC GCTTCGGCTG 
CTACACCCGA TGATGCCGTT TCTCACGGAG GAGCTTTGGC ACCGCCTGCC CAACTACAGC 
AGCTTCGGCA GCGAGTCGAT CATGCTCGCC AAGTACCCGA CACCGAGCGG ATGGTTGAGC 
GCGGCGTCGG ATAGCGCCAT GTCGATCATT CTCGACGTCG TGCACAGCGT ACGTTCCACC 
AAGGCCTCGT ACTCGCTAAC GAACAAGCAC AAGCCAGACG TGTGGGTGAC GGCGCATACG 
GCGGAGCTGC AGGAGCTGTT CGCGGCGGAA AAGATGATGA TCTCAACCCT CGGTGTCGTG 
GGCGAGGTGA CTGTCGTGTC CCCGGCCGAG GAGACAGCGG CGGTGCCGAA GGGCTGCGGC 
TTCTCCGTGG TGACAAAGGA GGTGGGCGTG AACATGATGC TCATGGGTTT CATCGACGTC 
GGGAAGGAGG TGGCGAAGCT GGAGAAGCAG CTGGACGGCC TCATGAAGCA GATTGAGGGA 
ATGAAGAAGA AGATGTCTAT CCCTAATTAC GAAACTAAGG TGCCGGCCGA GATCCGCGTG 
ACCAACACGG AGAAGCTCAA GACGCTAGAG GCGCAGAGCG CGCAGCTGCG CGATGGCATC 
GAGAAGATGA GCAGCCTCAA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_30_3170 cDNA ORF clone, Leishmania infantum JPCM5

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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