LINJ_30_1260 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_30_1260
Entrez Gene ID	5071013
Full Name	putative cysteine peptidase, Clan CA, family C19
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001466933.1	XP_001466970.1	putative cysteine peptidase, Clan CA, family C19

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_30_1260 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_30_1260 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc04501	XM_001466933.1 Latest version!	Leishmania infantum JPCM5 putative cysteine peptidase, Clan CA, family C19 partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_30_1260 ( XM_001466933.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001466970.1 Leishmania infantum JPCM5 putative cysteine peptidase, Clan CA, family C19 partial mRNA.

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CloneID	OLc04501
Clone ID Related Accession (Same CDS sequence)	XM_001466933.1
Accession Version	XM_001466933.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3021bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	putative cysteine peptidase, Clan CA, family C19
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009414). COMPLETENESS: incomplete on both ends.

ATGCCGTGCT ACTGCATCGA AGAGGTCGAC CTCGACATTT TTCGTGGCAT ATTCATAGAG 
CAATGGCTAA GCGGAAAGAA GCATAGCAGC TGCCAGGAGG CGCTCTTCTT CTGCACAACA 
TGCGGTCCGC CAGCGGTGCA GGAGTCCATA AAGGGCTCCT CCGGTAGCGG AAGCAGCAGC 
GGCGCGAACC GGCGCAGCAC CTATACCGCC AAGAGCTGCA CCCCAGAGAA AAAGAGCTCA 
TCCGCCAAGT CGACCTTTGG CAGCACGCTG AAAAAGCTCT TTACGTCGTC CAAGAGCAGC 
TCGAAAGCGG ACCTGAGCAC CATTTCGTCA AAGCAGCACT CTAGTTGCCA CATACGCGAG 
CCCAGCACCC GCATCATGTC GGCAGAGGAG GAGGAGCTCC CGATCACACC GCGGACGGAT 
AAGGAGCTGT ACCTGTGCGT GACCTGCGGC TCGTGCTACT GCCGCGATCA CGCTTGCGAC 
CACCACTACA GCCGTCAGCA GCGCAGCACC GTGGCGGGCG GCGACGACTC CGAAGCGCCG 
CACAAGGGTT ACCCATACCA CTCCTTCTTT ATCGGCGTCC CCAGCTTCGT GAGCACCCAC 
CCTTCCCACA TACTACAGGA GACGTCGTGG GGACTGCTTT TCCCCACCGT GACGGTGCGC 
GAGATCGAGG AGGGCACTAT CGACCTGTCG AAGCCGCTCC CCTTCTACGA GCACTTCGAG 
GAGATCTGCG ACGGCGGCGC TGCCTGCGAG ACGAGTGCCT TCCACCCGAA CAGTAGCATG 
ACCTCCAACA GTTACAGCTT CAGCCGCGGC AAGAACACAC TCGGCTTTTC TTCCAGCGGG 
ATGCACACAC GCATTCACAG CGCGTACAGC AGCAGTGGAC ACCTCGACGG GTCACTGCGG 
GTCCACTCAA AGTCGAACAG TTACATGGAT AAAAGGGAAG ACCGTCTCCC GGCGCGCCGA 
TCTGCCCTGC TTTCCCCCGT CGGGGCCCAC AGCAGCCTCT CTCTGCCAGA GTTTCACTCC 
TCGCCGCCTG AGAACTGGTC ATATCTCATG TTCTGCGCCA GATGCGCCGA TCGGCAGGCG 
GTGCGACTGA ATGGCAAGCA GTGCGACAAC GACATCTCGC GTCATGTCCA CCTGCGCCGG 
CTGGGACAGC TCACGGCTCT GCTCGCGTAC TTTCTGCTTC GTGGTGTGCG CCTCGAAGTG 
CCTGTTCAAT TTTTGGAGTA CTCCGCAAAG AAGCATGTGC AGCAGGTGGA GCGGCAACGC 
AGCCAGCAGC GTGCACACAG GTTGGCTGAG ATGCAGCGTG TCGGCCGCGC CTCGGAGCTC 
GTCGGAGGTC TCGAAGTGAT GGGAACGACG GGCGCGAGGC ATACAAGCAC CACCGGCGGT 
GGTGTGCGCA TGTCGCCGAC AGGCCCGAAC GTAGCGGGTG ACTTTAGCCT GCTGTCACGC 
ACAGAGACAG ACCACGTCAT CACCCGTGCG GCAATCTGCG GCTTCGCCAA TGAGAGCTAT 
TTCTGCTATA TGAACTCGGT GCTGCAGTGC CTGCTGCGGT GCCGCATCTT TGCGAACCCA 
CTTCTGCACC TCGATCCGTC CAAGAGCCCT GGAAAACTCA CGGCATCCGT GTCGCGTCTG 
CTGCACCACC TGGCACACCA GACGTATCAG GACGTGCTCA ACGGTGCCGT CTTCGCGTTC 
GTGCGCTCGC TGCGGACGCA GATTTGCAAT ATCAACGTGC TCTTCGAAGA GGATGAGCAG 
CAGGATGCCC AAGAGTTTCT CATCACGCTG CTCAACGGCA TCGAGGATGA GTTCGACAAA 
GGAAAGAGCG AAGAGGAGAA GAAGGCGTCG CGCCGTGTCA GCTTCGAGGG CGCGCTTCTC 
TCCGAGGTGA CCTGCTCCCA ATGCAAGCAC TGCGTCCCGC GCAACGAAAT GTTCATGTCC 
CTTTCCATCC CCATCGAGAA GAGCATCGAG GACGGTATTG CATCGCTCTT CGCGCCGACC 
ACGCTGCGCG GCAAGGACCG CTACGCATGC GAGGGCTGCT TCAAGAAGCT GTCGCAGAAA 
GAGCAGCAGG GGCACAACGC CCTCGCCGCA GTCCAGGCCG AGGCAGAGAG GAGGGCCAAG 
TTAGATGGGA AGAAGCTCAC TCAAGCGCAG ATAGAGGAGC GCGTGTATGC CAATGCGCTC 
TACAGCGAGG CCGAGGTACG CACGTCGCTC TCCCACCTCG GCGGCAGCCT TGCGGTGCAT 
CTCCTGCGCT TCCACTACGA CCCGACGGCG CAGGACTTCA TCAAGGTGCT CACACCGGTG 
CGCATCTCGC TCACCCTTGA CCTCACCCCG TACGTCAGCC GCGAGGTAGT GGAGGCCTAC 
AACCGTATGG AGAAGATCTA TCTCTTGCAG CGCCGCTTCC CGACTGCGTC AGAGAAACTG 
ATTAGCAAGT ACCTACGCCA CGCCAAGGAT GATGTCAAAC TGGCCACGCA GAAGATGTTA 
GATGACGGTC ATGGGATAGC CGAGGCGGTG CACTCACGGC AGAGTAGCAG CACTGCCGTC 
AGCCGCACCC ACACTGGGGT GGGAGCAGGC AACGCGGTTG GCGATGACGC GTCTGAGGAT 
GTGGCTGGCG TCGGCAGCGT CTTTGGCGAC GCCTCTGGTT GCACCTCCGG CTGCACCTCC 
TCCTTGGCTG CGACGCCGCT CAACAACCCC AACGGGGATC GGGGTACCTT TGCCAAGACG 
GTGGCCAAGT CTTGGGCAAA CACCAACGGA GGCGCTGGCA AGGCTACACC GTCTGATCCC 
GCTGCTGCGA TTTGCGCCAT TACGAGCGAC GAATTCGATC CGTTTGGCGA GCGCACCCCT 
CCGAAGCCAT CGTTGGTGCG CCAGCTGGTG GGTATCGTTG CGCATCGAGG CTCGCTGCAC 
GGGGGCCACT ACATCGCCTA TGTGCGCCAC CTCACTCGCC CACATGTATG GTTCCGCTGC 
GACGACGAGG ACATCGACGT GGTGGAGGAG AAGCACGTGC TCGATCACGA GGCTGAGGTG 
TACCTCGCCT TCTACGAGTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001466970.1
CDS	1..3021
Translation	MPCYCIEEVDLDIFRGIFIEQWLSGKKHSSCQEALFFCTTCGPPAVQESIKGSSGSGSSSGANRRSTYTAKSCTPEKKSSSAKSTFGSTLKKLFTSSKSSSKADLSTISSKQHSSCHIREPSTRIMSAEEEELPITPRTDKELYLCVTCGSCYCRDHACDHHYSRQQRSTVAGGDDSEAPHKGYPYHSFFIGVPSFVSTHPSHILQETSWGLLFPTVTVREIEEGTIDLSKPLPFYEHFEEICDGGAACETSAFHPNSSMTSNSYSFSRGKNTLGFSSSGMHTRIHSAYSSSGHLDGSLRVHSKSNSYMDKREDRLPARRSALLSPVGAHSSLSLPEFHSSPPENWSYLMFCARCADRQAVRLNGKQCDNDISRHVHLRRLGQLTALLAYFLLRGVRLEVPVQFLEYSAKKHVQQVERQRSQQRAHRLAEMQRVGRASELVGGLEVMGTTGARHTSTTGGGVRMSPTGPNVAGDFSLLSRTETDHVITRAAICGFANESYFCYMNSVLQCLLRCRIFANPLLHLDPSKSPGKLTASVSRLLHHLAHQTYQDVLNGAVFAFVRSLRTQICNINVLFEEDEQQDAQEFLITLLNGIEDEFDKGKSEEEKKASRRVSFEGALLSEVTCSQCKHCVPRNEMFMSLSIPIEKSIEDGIASLFAPTTLRGKDRYACEGCFKKLSQKEQQGHNALAAVQAEAERRAKLDGKKLTQAQIEERVYANALYSEAEVRTSLSHLGGSLAVHLLRFHYDPTAQDFIKVLTPVRISLTLDLTPYVSREVVEAYNRMEKIYLLQRRFPTASEKLISKYLRHAKDDVKLATQKMLDDGHGIAEAVHSRQSSSTAVSRTHTGVGAGNAVGDDASEDVAGVGSVFGDASGCTSGCTSSLAATPLNNPNGDRGTFAKTVAKSWANTNGGAGKATPSDPAAAICAITSDEFDPFGERTPPKPSLVRQLVGIVAHRGSLHGGHYIAYVRHLTRPHVWFRCDDEDIDVVEEKHVLDHEAEVYLAFYE

Target ORF information:

RefSeq Version	XM_001466933.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 putative cysteine peptidase, Clan CA, family C19 partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001466933.1

ORF Insert Sequence:

ATGCCGTGCT ACTGCATCGA AGAGGTCGAC CTCGACATTT TTCGTGGCAT ATTCATAGAG 
CAATGGCTAA GCGGAAAGAA GCATAGCAGC TGCCAGGAGG CGCTCTTCTT CTGCACAACA 
TGCGGTCCGC CAGCGGTGCA GGAGTCCATA AAGGGCTCCT CCGGTAGCGG AAGCAGCAGC 
GGCGCGAACC GGCGCAGCAC CTATACCGCC AAGAGCTGCA CCCCAGAGAA AAAGAGCTCA 
TCCGCCAAGT CGACCTTTGG CAGCACGCTG AAAAAGCTCT TTACGTCGTC CAAGAGCAGC 
TCGAAAGCGG ACCTGAGCAC CATTTCGTCA AAGCAGCACT CTAGTTGCCA CATACGCGAG 
CCCAGCACCC GCATCATGTC GGCAGAGGAG GAGGAGCTCC CGATCACACC GCGGACGGAT 
AAGGAGCTGT ACCTGTGCGT GACCTGCGGC TCGTGCTACT GCCGCGATCA CGCTTGCGAC 
CACCACTACA GCCGTCAGCA GCGCAGCACC GTGGCGGGCG GCGACGACTC CGAAGCGCCG 
CACAAGGGTT ACCCATACCA CTCCTTCTTT ATCGGCGTCC CCAGCTTCGT GAGCACCCAC 
CCTTCCCACA TACTACAGGA GACGTCGTGG GGACTGCTTT TCCCCACCGT GACGGTGCGC 
GAGATCGAGG AGGGCACTAT CGACCTGTCG AAGCCGCTCC CCTTCTACGA GCACTTCGAG 
GAGATCTGCG ACGGCGGCGC TGCCTGCGAG ACGAGTGCCT TCCACCCGAA CAGTAGCATG 
ACCTCCAACA GTTACAGCTT CAGCCGCGGC AAGAACACAC TCGGCTTTTC TTCCAGCGGG 
ATGCACACAC GCATTCACAG CGCGTACAGC AGCAGTGGAC ACCTCGACGG GTCACTGCGG 
GTCCACTCAA AGTCGAACAG TTACATGGAT AAAAGGGAAG ACCGTCTCCC GGCGCGCCGA 
TCTGCCCTGC TTTCCCCCGT CGGGGCCCAC AGCAGCCTCT CTCTGCCAGA GTTTCACTCC 
TCGCCGCCTG AGAACTGGTC ATATCTCATG TTCTGCGCCA GATGCGCCGA TCGGCAGGCG 
GTGCGACTGA ATGGCAAGCA GTGCGACAAC GACATCTCGC GTCATGTCCA CCTGCGCCGG 
CTGGGACAGC TCACGGCTCT GCTCGCGTAC TTTCTGCTTC GTGGTGTGCG CCTCGAAGTG 
CCTGTTCAAT TTTTGGAGTA CTCCGCAAAG AAGCATGTGC AGCAGGTGGA GCGGCAACGC 
AGCCAGCAGC GTGCACACAG GTTGGCTGAG ATGCAGCGTG TCGGCCGCGC CTCGGAGCTC 
GTCGGAGGTC TCGAAGTGAT GGGAACGACG GGCGCGAGGC ATACAAGCAC CACCGGCGGT 
GGTGTGCGCA TGTCGCCGAC AGGCCCGAAC GTAGCGGGTG ACTTTAGCCT GCTGTCACGC 
ACAGAGACAG ACCACGTCAT CACCCGTGCG GCAATCTGCG GCTTCGCCAA TGAGAGCTAT 
TTCTGCTATA TGAACTCGGT GCTGCAGTGC CTGCTGCGGT GCCGCATCTT TGCGAACCCA 
CTTCTGCACC TCGATCCGTC CAAGAGCCCT GGAAAACTCA CGGCATCCGT GTCGCGTCTG 
CTGCACCACC TGGCACACCA GACGTATCAG GACGTGCTCA ACGGTGCCGT CTTCGCGTTC 
GTGCGCTCGC TGCGGACGCA GATTTGCAAT ATCAACGTGC TCTTCGAAGA GGATGAGCAG 
CAGGATGCCC AAGAGTTTCT CATCACGCTG CTCAACGGCA TCGAGGATGA GTTCGACAAA 
GGAAAGAGCG AAGAGGAGAA GAAGGCGTCG CGCCGTGTCA GCTTCGAGGG CGCGCTTCTC 
TCCGAGGTGA CCTGCTCCCA ATGCAAGCAC TGCGTCCCGC GCAACGAAAT GTTCATGTCC 
CTTTCCATCC CCATCGAGAA GAGCATCGAG GACGGTATTG CATCGCTCTT CGCGCCGACC 
ACGCTGCGCG GCAAGGACCG CTACGCATGC GAGGGCTGCT TCAAGAAGCT GTCGCAGAAA 
GAGCAGCAGG GGCACAACGC CCTCGCCGCA GTCCAGGCCG AGGCAGAGAG GAGGGCCAAG 
TTAGATGGGA AGAAGCTCAC TCAAGCGCAG ATAGAGGAGC GCGTGTATGC CAATGCGCTC 
TACAGCGAGG CCGAGGTACG CACGTCGCTC TCCCACCTCG GCGGCAGCCT TGCGGTGCAT 
CTCCTGCGCT TCCACTACGA CCCGACGGCG CAGGACTTCA TCAAGGTGCT CACACCGGTG 
CGCATCTCGC TCACCCTTGA CCTCACCCCG TACGTCAGCC GCGAGGTAGT GGAGGCCTAC 
AACCGTATGG AGAAGATCTA TCTCTTGCAG CGCCGCTTCC CGACTGCGTC AGAGAAACTG 
ATTAGCAAGT ACCTACGCCA CGCCAAGGAT GATGTCAAAC TGGCCACGCA GAAGATGTTA 
GATGACGGTC ATGGGATAGC CGAGGCGGTG CACTCACGGC AGAGTAGCAG CACTGCCGTC 
AGCCGCACCC ACACTGGGGT GGGAGCAGGC AACGCGGTTG GCGATGACGC GTCTGAGGAT 
GTGGCTGGCG TCGGCAGCGT CTTTGGCGAC GCCTCTGGTT GCACCTCCGG CTGCACCTCC 
TCCTTGGCTG CGACGCCGCT CAACAACCCC AACGGGGATC GGGGTACCTT TGCCAAGACG 
GTGGCCAAGT CTTGGGCAAA CACCAACGGA GGCGCTGGCA AGGCTACACC GTCTGATCCC 
GCTGCTGCGA TTTGCGCCAT TACGAGCGAC GAATTCGATC CGTTTGGCGA GCGCACCCCT 
CCGAAGCCAT CGTTGGTGCG CCAGCTGGTG GGTATCGTTG CGCATCGAGG CTCGCTGCAC 
GGGGGCCACT ACATCGCCTA TGTGCGCCAC CTCACTCGCC CACATGTATG GTTCCGCTGC 
GACGACGAGG ACATCGACGT GGTGGAGGAG AAGCACGTGC TCGATCACGA GGCTGAGGTG 
TACCTCGCCT TCTACGAGTA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_30_1260 cDNA ORF clone, Leishmania infantum JPCM5

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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