LINJ_30_1150 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_30_1150
Entrez Gene ID	5071002
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001466922.1	XP_001466959.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_30_1150 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_30_1150 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc04490	XM_001466922.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_30_1150 ( XM_001466922.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001466959.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc04490
Clone ID Related Accession (Same CDS sequence)	XM_001466922.1
Accession Version	XM_001466922.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2991bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009414). COMPLETENESS: incomplete on both ends.

ATGAGCTCCT CCATGCTGCG CAGTGGATTA CAGCTGGTGG CGATCGACTA TAGCAATCCT 
CAGCCGCAGT ACCCCGGCGG CCCGGTGCTG GACGCTGCCG CCTTCAGCTA CGATCCATTG 
AGCGAAGAGA GCGCCGCGCT GCATCAGTGC GTCTCGGCTG TGAACAGCCC GCCAGTGACG 
TACGGCGTTG ACGATCTGCT GGGCCGCATT ACCAATGTGG AGTTCATTGC CGCGGGGGGC 
AGTCCGGAGG AGGCTGCGGC CGGAGCGCCG ATGCACTACA GACTGGCATC CTCCCTGGAG 
CCGATGTTGA ATGCCACGCT GAACCCAGCC ATCACCGCCG TTGTAGACCA CTGCCTCAGC 
TCGATTGTGC TTGTGTACGG CGCAACGCAG GAGATGAAGC AAATGGGCCT GATTGGCACC 
CCGGAGGAGT GCGGGTTGCT GCCGCATGGC ATTCGCACCC TAATGGAGCG CTTGCTCGAC 
CGCAAGGAGC ACCAGCTATC AAAGGCGGCG AGTTTAAACT GCACCGCAAA GCCGACCGGT 
GACCGGGCTG CGGCAGCGTC CGACAGCGTT GGCTCCGACG CCTCGCCGTC AGCCCCACCC 
CGTGCGGCGG GAAGCGTGTC GCCACCGTTC GGCGGCGGAG ACGACGCTGT CTCGGACAGC 
GACCACACCG AAGCCGTGCA CAGTCGCTCG GCCACTTCGC ACACGCACAG TTTCGTTTTC 
CCGTCTATCG GTTCCCGGCA CCACCGGTTT GTGCGTATGG AGGCGACTTT CATCGCCTTC 
GACTCGACCA GCGTGGTGGA CTTGCTGGAT CTATCTAACA AGCACGCGGA GCTCGTGCTG 
AAGCTTGCGC CTCCGCCGAC ACCGTCTGCG TTCGAGGAGA TGACATGCGA TGTGAGCGCG 
GCAGCCAGTA CGTCTCCCAC GACGGACTCG TTCGTGCTCA ACGCGCAAGT GATGCCGGTT 
GAGAACGCGA ACGACGCCCT CTCTGCGCTC GACATCGGCC TGGACAACCT CACACGGGCG 
TTGGAACTGC CCCTCTTGCA GTCAGAGTCG GGCTCGTCCT TGCTCTTTTC GCTCACGGCC 
TTTACCGACA CGTGTCGGTG CGCGACGATG CACATGCTGT GCCTTGCCGA AGACCCGGCT 
GCGCAGGCCT GGCTGGTGTC GACTGTGCAG GCCCGCAGTC AGGCGATTCC GCTCGGTGAG 
GAGCAGAGCT GGGCGTCCAT CCAGAATACG CCGATGCCGC CGCCACTGCA CCACCACGCC 
GCCACGATGC TTGTGCCGGC GCTCTGCTTC GGCAATATGT TCACCTCCGT TCTCATATGT 
GTGTACAACT CCATCACAGC GCTTAGCCGG CTAAACCGTG ACTTGACGTT AGCGGTGACA 
GGATATCGCA TGCGCACCAT CCCGCGCGTG ACGCTGGCGA GCTCAAGGCG CGGGCTGAAG 
AAGCTGCCGC CGAGCTGGGA GGAGCACTTC ACAAACGACG GCCGACGCTA CTTTATCGAC 
ACCTCCACGC AGACAACCAC TTGGAAGGAC CCGCGCTTTA CCTATCCGCA TTACTCATCT 
CGCTCCGGCG GCTTGACAGG CAACAACCCA AGTGGAAGCG GCACTGGCGC CGACAGCGGC 
AGGTCGAGTC GCAGCGGCAG CCCTCACCAC CGACCCAGTC GCATCAGCCT CGGCCCAGGC 
GACAAAGATT TCTTGATGAG CCGCCTTCAG CAGGAGATGC ACGGCGGCAG CCCTAGTGCC 
ACGGGCAGCA CCGGCACCAC TCAGCAGCCC GCAGCGTGTG CGGGGAGGCT GCCCGCGCTA 
GGTGCCCCCG CTTCAGGCGC GGATTCCCTT GACATCGGCA TCATCGTCGT GGACACGATG 
TGTCGTCCAC GCGTGCTGAT CCACTCACGG AATCCGCAGT TTGCCTTGCA GTATGACGAG 
CAGGAGGAGG TGCTGCGTGC GAAGCGACGA GAGTTGGAGG AGGCGAGGGT GGAGCTGCAG 
CGGAAGGCGA AGGCGGCAGC TGTGCTAGGC GAGGCCGCGG GGGAGGCACA GGACGCCGGG 
CCGGCAAGCG TGCCGGATAC GGCCAAGCCG CGGGAAGCCG TGCAACCCAT TGTTGATCGG 
GCTGCGCCAA CCCAGGCCGT GGACTTGGCC CACTCTTCTC CAACGCCAGC GAAGGGGGTG 
GTTGGGCTGG ACGACGTTGA CGACGAGGAG ATATCAGCGT TATGCCACAG AAACTCGGTC 
AAAATCGAAG ACTTCATGTT CGAGGACGAT AGCGACGAGG GTGGCGAAGA TGACGAGGCG 
AGCGGCACCG AGCAGATTTC AACACCCGAG TCCGCCTTCA AGGCGGGTGG AGTCGCGATA 
TCACAAAGCT GCACAGCCTC CAGCGCCGAG GCGCGCTTCT ACGCCAACGT GCTGCAGGAG 
CAGGCTGCCG GCGTCGGCGA GGTGAGTGCT TCGAGCACCG TGTCATCCAC GGAGACCTCC 
GTGGCCGTAT CACCGGTGAT CAAGAGTGCT GCCGCGCCGG GAAGCAGCAG CAACATCGCA 
GCTGCTGCAT CTGATGAGCA AAGTTCTAGC GTCATCAGCG ATGCCCCGCA CGGTGGCACC 
ACGATGGCAG CGGCCCCGCC CGAGGTGCAG GACCTGGAGT CGCTGGTTGA CGAGTTTACC 
GCCTTCTACA GAAGAGCGTT TGAGCTGCAA CAGCGCGTTG CGGAGCTTGA GGCGGAGCTG 
AAGAGGCCGA AGTCGACTGC TCGTTCGTCG TCGCCGTTGT CGTTGCCAGT GGCAACAGAA 
GCCTCGGACG CCGGTGTGCA TGAGTTGGTG CAGCAGATGC TCAAGGCGGT GGAGCTGTCG 
CCATCAGCTG AGGTGCGCGC TGCACTTACG CCGATGCTGA CAAACGCCGC GTCCACCGCG 
CCGGCAACGG CCACAGCTTC GGTGGTGCTG CAGGCATTTC ACGAAGCTCT GCGAATTGCA 
GCGCAGACCA ACCGTGCGGG AGGAAGAGCG AACGCTGCTC CAAAACAATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001466959.1
CDS	1..2991
Translation	MSSSMLRSGLQLVAIDYSNPQPQYPGGPVLDAAAFSYDPLSEESAALHQCVSAVNSPPVTYGVDDLLGRITNVEFIAAGGSPEEAAAGAPMHYRLASSLEPMLNATLNPAITAVVDHCLSSIVLVYGATQEMKQMGLIGTPEECGLLPHGIRTLMERLLDRKEHQLSKAASLNCTAKPTGDRAAAASDSVGSDASPSAPPRAAGSVSPPFGGGDDAVSDSDHTEAVHSRSATSHTHSFVFPSIGSRHHRFVRMEATFIAFDSTSVVDLLDLSNKHAELVLKLAPPPTPSAFEEMTCDVSAAASTSPTTDSFVLNAQVMPVENANDALSALDIGLDNLTRALELPLLQSESGSSLLFSLTAFTDTCRCATMHMLCLAEDPAAQAWLVSTVQARSQAIPLGEEQSWASIQNTPMPPPLHHHAATMLVPALCFGNMFTSVLICVYNSITALSRLNRDLTLAVTGYRMRTIPRVTLASSRRGLKKLPPSWEEHFTNDGRRYFIDTSTQTTTWKDPRFTYPHYSSRSGGLTGNNPSGSGTGADSGRSSRSGSPHHRPSRISLGPGDKDFLMSRLQQEMHGGSPSATGSTGTTQQPAACAGRLPALGAPASGADSLDIGIIVVDTMCRPRVLIHSRNPQFALQYDEQEEVLRAKRRELEEARVELQRKAKAAAVLGEAAGEAQDAGPASVPDTAKPREAVQPIVDRAAPTQAVDLAHSSPTPAKGVVGLDDVDDEEISALCHRNSVKIEDFMFEDDSDEGGEDDEASGTEQISTPESAFKAGGVAISQSCTASSAEARFYANVLQEQAAGVGEVSASSTVSSTETSVAVSPVIKSAAAPGSSSNIAAAASDEQSSSVISDAPHGGTTMAAAPPEVQDLESLVDEFTAFYRRAFELQQRVAELEAELKRPKSTARSSSPLSLPVATEASDAGVHELVQQMLKAVELSPSAEVRAALTPMLTNAASTAPATATASVVLQAFHEALRIAAQTNRAGGRANAAPKQ

Target ORF information:

RefSeq Version	XM_001466922.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001466922.1

ORF Insert Sequence:

ATGAGCTCCT CCATGCTGCG CAGTGGATTA CAGCTGGTGG CGATCGACTA TAGCAATCCT 
CAGCCGCAGT ACCCCGGCGG CCCGGTGCTG GACGCTGCCG CCTTCAGCTA CGATCCATTG 
AGCGAAGAGA GCGCCGCGCT GCATCAGTGC GTCTCGGCTG TGAACAGCCC GCCAGTGACG 
TACGGCGTTG ACGATCTGCT GGGCCGCATT ACCAATGTGG AGTTCATTGC CGCGGGGGGC 
AGTCCGGAGG AGGCTGCGGC CGGAGCGCCG ATGCACTACA GACTGGCATC CTCCCTGGAG 
CCGATGTTGA ATGCCACGCT GAACCCAGCC ATCACCGCCG TTGTAGACCA CTGCCTCAGC 
TCGATTGTGC TTGTGTACGG CGCAACGCAG GAGATGAAGC AAATGGGCCT GATTGGCACC 
CCGGAGGAGT GCGGGTTGCT GCCGCATGGC ATTCGCACCC TAATGGAGCG CTTGCTCGAC 
CGCAAGGAGC ACCAGCTATC AAAGGCGGCG AGTTTAAACT GCACCGCAAA GCCGACCGGT 
GACCGGGCTG CGGCAGCGTC CGACAGCGTT GGCTCCGACG CCTCGCCGTC AGCCCCACCC 
CGTGCGGCGG GAAGCGTGTC GCCACCGTTC GGCGGCGGAG ACGACGCTGT CTCGGACAGC 
GACCACACCG AAGCCGTGCA CAGTCGCTCG GCCACTTCGC ACACGCACAG TTTCGTTTTC 
CCGTCTATCG GTTCCCGGCA CCACCGGTTT GTGCGTATGG AGGCGACTTT CATCGCCTTC 
GACTCGACCA GCGTGGTGGA CTTGCTGGAT CTATCTAACA AGCACGCGGA GCTCGTGCTG 
AAGCTTGCGC CTCCGCCGAC ACCGTCTGCG TTCGAGGAGA TGACATGCGA TGTGAGCGCG 
GCAGCCAGTA CGTCTCCCAC GACGGACTCG TTCGTGCTCA ACGCGCAAGT GATGCCGGTT 
GAGAACGCGA ACGACGCCCT CTCTGCGCTC GACATCGGCC TGGACAACCT CACACGGGCG 
TTGGAACTGC CCCTCTTGCA GTCAGAGTCG GGCTCGTCCT TGCTCTTTTC GCTCACGGCC 
TTTACCGACA CGTGTCGGTG CGCGACGATG CACATGCTGT GCCTTGCCGA AGACCCGGCT 
GCGCAGGCCT GGCTGGTGTC GACTGTGCAG GCCCGCAGTC AGGCGATTCC GCTCGGTGAG 
GAGCAGAGCT GGGCGTCCAT CCAGAATACG CCGATGCCGC CGCCACTGCA CCACCACGCC 
GCCACGATGC TTGTGCCGGC GCTCTGCTTC GGCAATATGT TCACCTCCGT TCTCATATGT 
GTGTACAACT CCATCACAGC GCTTAGCCGG CTAAACCGTG ACTTGACGTT AGCGGTGACA 
GGATATCGCA TGCGCACCAT CCCGCGCGTG ACGCTGGCGA GCTCAAGGCG CGGGCTGAAG 
AAGCTGCCGC CGAGCTGGGA GGAGCACTTC ACAAACGACG GCCGACGCTA CTTTATCGAC 
ACCTCCACGC AGACAACCAC TTGGAAGGAC CCGCGCTTTA CCTATCCGCA TTACTCATCT 
CGCTCCGGCG GCTTGACAGG CAACAACCCA AGTGGAAGCG GCACTGGCGC CGACAGCGGC 
AGGTCGAGTC GCAGCGGCAG CCCTCACCAC CGACCCAGTC GCATCAGCCT CGGCCCAGGC 
GACAAAGATT TCTTGATGAG CCGCCTTCAG CAGGAGATGC ACGGCGGCAG CCCTAGTGCC 
ACGGGCAGCA CCGGCACCAC TCAGCAGCCC GCAGCGTGTG CGGGGAGGCT GCCCGCGCTA 
GGTGCCCCCG CTTCAGGCGC GGATTCCCTT GACATCGGCA TCATCGTCGT GGACACGATG 
TGTCGTCCAC GCGTGCTGAT CCACTCACGG AATCCGCAGT TTGCCTTGCA GTATGACGAG 
CAGGAGGAGG TGCTGCGTGC GAAGCGACGA GAGTTGGAGG AGGCGAGGGT GGAGCTGCAG 
CGGAAGGCGA AGGCGGCAGC TGTGCTAGGC GAGGCCGCGG GGGAGGCACA GGACGCCGGG 
CCGGCAAGCG TGCCGGATAC GGCCAAGCCG CGGGAAGCCG TGCAACCCAT TGTTGATCGG 
GCTGCGCCAA CCCAGGCCGT GGACTTGGCC CACTCTTCTC CAACGCCAGC GAAGGGGGTG 
GTTGGGCTGG ACGACGTTGA CGACGAGGAG ATATCAGCGT TATGCCACAG AAACTCGGTC 
AAAATCGAAG ACTTCATGTT CGAGGACGAT AGCGACGAGG GTGGCGAAGA TGACGAGGCG 
AGCGGCACCG AGCAGATTTC AACACCCGAG TCCGCCTTCA AGGCGGGTGG AGTCGCGATA 
TCACAAAGCT GCACAGCCTC CAGCGCCGAG GCGCGCTTCT ACGCCAACGT GCTGCAGGAG 
CAGGCTGCCG GCGTCGGCGA GGTGAGTGCT TCGAGCACCG TGTCATCCAC GGAGACCTCC 
GTGGCCGTAT CACCGGTGAT CAAGAGTGCT GCCGCGCCGG GAAGCAGCAG CAACATCGCA 
GCTGCTGCAT CTGATGAGCA AAGTTCTAGC GTCATCAGCG ATGCCCCGCA CGGTGGCACC 
ACGATGGCAG CGGCCCCGCC CGAGGTGCAG GACCTGGAGT CGCTGGTTGA CGAGTTTACC 
GCCTTCTACA GAAGAGCGTT TGAGCTGCAA CAGCGCGTTG CGGAGCTTGA GGCGGAGCTG 
AAGAGGCCGA AGTCGACTGC TCGTTCGTCG TCGCCGTTGT CGTTGCCAGT GGCAACAGAA 
GCCTCGGACG CCGGTGTGCA TGAGTTGGTG CAGCAGATGC TCAAGGCGGT GGAGCTGTCG 
CCATCAGCTG AGGTGCGCGC TGCACTTACG CCGATGCTGA CAAACGCCGC GTCCACCGCG 
CCGGCAACGG CCACAGCTTC GGTGGTGCTG CAGGCATTTC ACGAAGCTCT GCGAATTGCA 
GCGCAGACCA ACCGTGCGGG AGGAAGAGCG AACGCTGCTC CAAAACAATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_30_1150 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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