LINJ_27_0690 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_27_0690
Entrez Gene ID	5070030
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001466286.1	XP_001466323.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_27_0690 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_27_0690 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc03633	XM_001466286.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_27_0690 ( XM_001466286.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001466323.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc03633
Clone ID Related Accession (Same CDS sequence)	XM_001466286.1
Accession Version	XM_001466286.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3108bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009411). COMPLETENESS: incomplete on both ends.

ATGCAAGGAA CTTTGTTTTC CGTGAACGTG CTGCGAAGCC CTTTTGGGGT GCGTGGGGCA 
CACTTGGTGC CGCCGCCTGA CGCCGAGGTG GCTGTGGGGA AGGTGTCGAC TGTCACAGAT 
GCCAAGGTGA CGGATAGCTA TGCGCAGGTG CTGCCGCTGC ACACGCCCGT TGGCCGTACG 
ACACGTCAGA GCTACGCGGT CTCTGGTACT CGCGGGATCC AGCAGTTGGT CGCCAACACG 
CGCAGCGCCT CTTTCTTGGC GCCGTCCACT CTTGTGGCAG CTCAGCGAGT CAACAGCAGA 
GGGCACTGCA TGCCATCTGC CACGCCGCAG CTGCAGGTCA TCTCAAAGCA CGAGAAGGGC 
CGCCTGCTGG TGTGGAATGG CCTCACCGGC GCCGTCGTCG CCGCCTGTAT CTTTCCCCCG 
ACGTTCAATG TGGATCACTG CGCAGTCGCG GCGTCGTATG TATACACGAC CGTGGAAGGC 
TCGGCGGTCA AATCTGTTGC GGAGGAGGAG GCTTGCGTGT ATGTATGGTC CCGCTCCACC 
CTTCGCAGTG TCACGGTGCT GAGAGGGCAT AGCGGCCGCT TGACCGCCTT GGGGGTGTGG 
CCGATGGAAA CCTCGACGCT TATCGCGACG GCAAGCCTCG ACGGCACGGT GCTACTCTGG 
CGCCATCAGC ACAGCCCAGG GCCCTGGGAC GGCGCGGTCG CTAACGAGGA CCCGGTGCAG 
CTTTTGTGGG TGTTAGCCAC AGCGGAGCTG GGGAGCGTGC ACTCGCTGAA GTTTCTTGCA 
GCAGACACCG TGGTGGCAGC CGCTACTCGC TGCGCACTGG CTTTTGTCCG CTTTCCTGAG 
GCACCGGCGA AGCGGAAGTG CCGGGGCAGC ATGGTGAGCA TGGGAAAGGC CGACGCTCTC 
GCTTTCCAAA TGGTGCGGTC CATCGTCGAT CCGAACGGTG GCACTACCTT CCTGCATGTG 
TGTCCATACA ACCGCACCAG TGGCGGGGTG GTGGCGGTGA CTCCCGCGTT AGGCAACTTT 
AGTCTGTCCT CCCTCGCTTC CTCTTCGTCA GCTCGAGTCA GTGCCGCAGC GCCCGTGTCG 
GAGTCGTCTA CAGTGTACCT CCTGACCGGC AGCACCAGCG GGTACATGCA GGAGTGGACG 
GTGGATGTGG AGAACACGGC ATCTGCAGAG GCGCCGCCGA AGCCGGCTGC CTCGTCCGCC 
GAGCCTGTGT ACGTCGACAT CAAGTGCCGC TGGCACCACA AAGCGCACTC TGCCACGGTG 
GACTGCGTCG TCACGGACGA GGATGTCGTG GTAAGCACGA GCCTGTTCGA CCGCGCCAGC 
ATCTACCACC GCACTAGCGG TGCCACCTGC GCCATCGCCA GCACCGCGGC GATTCCCGTG 
CTCGTGCCGC AGCTGAAGGA GCTCGTGTGG GGCACCATCG ACGGTACGCT GAGCGTCGCG 
AGCTACGCGC GCTTTGCGTC TGGGGTGGAG AATGAGCTGC AGCTGCTGTG GACGGCCAGG 
CCGCACGCGA CGGCGATCCG CGGAGTGTGC TTGTCCTTGA CACCCGACCT CCGCTGGGAC 
ACCCTCTGCA CCGGTGCAGC CGACGGGTCT ATGTGCGTGT GGAGGGCCAT GCCGGAGTCG 
GGGCGGACGG CGGCTGGCAG CACCGCAGCA AAGAAGGAGG GCGCTGCGCC ATTGATTGCC 
CACCTCTTGC ACGTACTCGC TCTGCCACCG AACACTGTGG AGAAAGGGGA TGCTGATGGG 
AAGCGGGTGG CGGCCGTGGT GGCGGGGCTG AAGGCATCCA CCGCCGGCAC ACAAGGTGCC 
ATCATTGTCG TGGAGCTGGC AGCCACTGGA GATGTTGGCC AGGTTTCCGC CGTGCTCCTC 
AAGGACAACG TAGAGGTGTC GTGCGCGCAC CTGTGCCGCG GCGACAAGGG CACCCTCTCC 
CTCTGGGTCG GGACGCGCTG TGGTCAGCTG TTGCACGCTC TCCACAAACC GGCGCAGAAG 
GTCTGGACAG CGCTGATGCC GGTGCAGTGG GATAGCAAAC CGAACGGCAG CGTGGTCGCC 
ATCGCAGATG ACGCCGGATC GTCGTCCATC ATGGTGGCTG TTGCCGAAGC GCCCGACGCG 
AGTCGGGCGT CGCAACGCCT GTTCCTCTCC GCGCTTCAGC TGGAGCCCGG GGCGACGGTG 
AAGACGATGC TCTCACGATG GGAAAGTGAT ATTGCCCTTC CTTGCACTGT ATACGCCGCC 
AGCCACCGCG AGCGCACGTT CGCCATGACA TGGGTGAGCA AGGTGCTCTC GGGCGAGCAA 
GCCTCTCCGC GTGCCATCAG TGGGCTGCTC GTGTGTTGCA GCGACGGCAC CATGGTGCGC 
TGTTTGCGCA CTAGCATGGC CGATGCTGCC CCTTCTGTAG GCCCTTGGAG CACACCCGAG 
GTACTCGTCA TGGCGGCGGC GTCGGGGCAA GCAAACACCA TTCAGCGCAA TTTCGACGAG 
TCGCCGTCCT TCTCGGCCAC AGCGGTGGCC TCGCCAAGTC GAAACTCAGA TCTTCTCTGC 
GTCGACATGT TTGAGAACAG CAAGCGATTA CTGATGCCGT CGAAGGTGCG GACGACGCAG 
CTGACAGCGA TCCTGTGCGA CGTTGGGACA GAGAGGGTGC GGCTGGCGGC GGTGCGGCAA 
GAAAAGCCGG ATGCCGCGAG CGAAGTGGCA CTCTTCGACA ACGCGGGTCG GGAGTTTGGT 
CGCGTAACGC ACGACGGCGC CGTGTTGCAC AGCAACGACG TGTCTGCAGC ATCTGCCTCG 
AAAGGACCGA TCAGCTATAC ACCCAAAGTG CAGGGGGCGT CCCTGCGTCG GTCCTCGGCG 
GCGGCAGTGG CCACGGCAGC CGAAGCTGCC AACTGCACCG CTATCGCTGC ACACGCGGGG 
GATCGAATCG CCTTCATTGG CTACGATGAC GGTCTTCTGC AGATGGTCGA CACAGCTGAC 
GTGTACGTCT TCTGTCGTCG CTGGGCAACA GACGCGACTG GCGTCGCGCG ACGGATCGTT 
GACGTGCGGT ATGCTGGCTC GGGGGTAGTA GTGGTGCTGT TAGCGAACCA CCACCTCTGC 
AGTTTCGCTG TTCCCCCGCG TAGTCTACTC GACCAACCTT CGCTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001466323.1
CDS	1..3108
Translation	MQGTLFSVNVLRSPFGVRGAHLVPPPDAEVAVGKVSTVTDAKVTDSYAQVLPLHTPVGRTTRQSYAVSGTRGIQQLVANTRSASFLAPSTLVAAQRVNSRGHCMPSATPQLQVISKHEKGRLLVWNGLTGAVVAACIFPPTFNVDHCAVAASYVYTTVEGSAVKSVAEEEACVYVWSRSTLRSVTVLRGHSGRLTALGVWPMETSTLIATASLDGTVLLWRHQHSPGPWDGAVANEDPVQLLWVLATAELGSVHSLKFLAADTVVAAATRCALAFVRFPEAPAKRKCRGSMVSMGKADALAFQMVRSIVDPNGGTTFLHVCPYNRTSGGVVAVTPALGNFSLSSLASSSSARVSAAAPVSESSTVYLLTGSTSGYMQEWTVDVENTASAEAPPKPAASSAEPVYVDIKCRWHHKAHSATVDCVVTDEDVVVSTSLFDRASIYHRTSGATCAIASTAAIPVLVPQLKELVWGTIDGTLSVASYARFASGVENELQLLWTARPHATAIRGVCLSLTPDLRWDTLCTGAADGSMCVWRAMPESGRTAAGSTAAKKEGAAPLIAHLLHVLALPPNTVEKGDADGKRVAAVVAGLKASTAGTQGAIIVVELAATGDVGQVSAVLLKDNVEVSCAHLCRGDKGTLSLWVGTRCGQLLHALHKPAQKVWTALMPVQWDSKPNGSVVAIADDAGSSSIMVAVAEAPDASRASQRLFLSALQLEPGATVKTMLSRWESDIALPCTVYAASHRERTFAMTWVSKVLSGEQASPRAISGLLVCCSDGTMVRCLRTSMADAAPSVGPWSTPEVLVMAAASGQANTIQRNFDESPSFSATAVASPSRNSDLLCVDMFENSKRLLMPSKVRTTQLTAILCDVGTERVRLAAVRQEKPDAASEVALFDNAGREFGRVTHDGAVLHSNDVSAASASKGPISYTPKVQGASLRRSSAAAVATAAEAANCTAIAAHAGDRIAFIGYDDGLLQMVDTADVYVFCRRWATDATGVARRIVDVRYAGSGVVVVLLANHHLCSFAVPPRSLLDQPSL

Target ORF information:

RefSeq Version	XM_001466286.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001466286.1

ORF Insert Sequence:

ATGCAAGGAA CTTTGTTTTC CGTGAACGTG CTGCGAAGCC CTTTTGGGGT GCGTGGGGCA 
CACTTGGTGC CGCCGCCTGA CGCCGAGGTG GCTGTGGGGA AGGTGTCGAC TGTCACAGAT 
GCCAAGGTGA CGGATAGCTA TGCGCAGGTG CTGCCGCTGC ACACGCCCGT TGGCCGTACG 
ACACGTCAGA GCTACGCGGT CTCTGGTACT CGCGGGATCC AGCAGTTGGT CGCCAACACG 
CGCAGCGCCT CTTTCTTGGC GCCGTCCACT CTTGTGGCAG CTCAGCGAGT CAACAGCAGA 
GGGCACTGCA TGCCATCTGC CACGCCGCAG CTGCAGGTCA TCTCAAAGCA CGAGAAGGGC 
CGCCTGCTGG TGTGGAATGG CCTCACCGGC GCCGTCGTCG CCGCCTGTAT CTTTCCCCCG 
ACGTTCAATG TGGATCACTG CGCAGTCGCG GCGTCGTATG TATACACGAC CGTGGAAGGC 
TCGGCGGTCA AATCTGTTGC GGAGGAGGAG GCTTGCGTGT ATGTATGGTC CCGCTCCACC 
CTTCGCAGTG TCACGGTGCT GAGAGGGCAT AGCGGCCGCT TGACCGCCTT GGGGGTGTGG 
CCGATGGAAA CCTCGACGCT TATCGCGACG GCAAGCCTCG ACGGCACGGT GCTACTCTGG 
CGCCATCAGC ACAGCCCAGG GCCCTGGGAC GGCGCGGTCG CTAACGAGGA CCCGGTGCAG 
CTTTTGTGGG TGTTAGCCAC AGCGGAGCTG GGGAGCGTGC ACTCGCTGAA GTTTCTTGCA 
GCAGACACCG TGGTGGCAGC CGCTACTCGC TGCGCACTGG CTTTTGTCCG CTTTCCTGAG 
GCACCGGCGA AGCGGAAGTG CCGGGGCAGC ATGGTGAGCA TGGGAAAGGC CGACGCTCTC 
GCTTTCCAAA TGGTGCGGTC CATCGTCGAT CCGAACGGTG GCACTACCTT CCTGCATGTG 
TGTCCATACA ACCGCACCAG TGGCGGGGTG GTGGCGGTGA CTCCCGCGTT AGGCAACTTT 
AGTCTGTCCT CCCTCGCTTC CTCTTCGTCA GCTCGAGTCA GTGCCGCAGC GCCCGTGTCG 
GAGTCGTCTA CAGTGTACCT CCTGACCGGC AGCACCAGCG GGTACATGCA GGAGTGGACG 
GTGGATGTGG AGAACACGGC ATCTGCAGAG GCGCCGCCGA AGCCGGCTGC CTCGTCCGCC 
GAGCCTGTGT ACGTCGACAT CAAGTGCCGC TGGCACCACA AAGCGCACTC TGCCACGGTG 
GACTGCGTCG TCACGGACGA GGATGTCGTG GTAAGCACGA GCCTGTTCGA CCGCGCCAGC 
ATCTACCACC GCACTAGCGG TGCCACCTGC GCCATCGCCA GCACCGCGGC GATTCCCGTG 
CTCGTGCCGC AGCTGAAGGA GCTCGTGTGG GGCACCATCG ACGGTACGCT GAGCGTCGCG 
AGCTACGCGC GCTTTGCGTC TGGGGTGGAG AATGAGCTGC AGCTGCTGTG GACGGCCAGG 
CCGCACGCGA CGGCGATCCG CGGAGTGTGC TTGTCCTTGA CACCCGACCT CCGCTGGGAC 
ACCCTCTGCA CCGGTGCAGC CGACGGGTCT ATGTGCGTGT GGAGGGCCAT GCCGGAGTCG 
GGGCGGACGG CGGCTGGCAG CACCGCAGCA AAGAAGGAGG GCGCTGCGCC ATTGATTGCC 
CACCTCTTGC ACGTACTCGC TCTGCCACCG AACACTGTGG AGAAAGGGGA TGCTGATGGG 
AAGCGGGTGG CGGCCGTGGT GGCGGGGCTG AAGGCATCCA CCGCCGGCAC ACAAGGTGCC 
ATCATTGTCG TGGAGCTGGC AGCCACTGGA GATGTTGGCC AGGTTTCCGC CGTGCTCCTC 
AAGGACAACG TAGAGGTGTC GTGCGCGCAC CTGTGCCGCG GCGACAAGGG CACCCTCTCC 
CTCTGGGTCG GGACGCGCTG TGGTCAGCTG TTGCACGCTC TCCACAAACC GGCGCAGAAG 
GTCTGGACAG CGCTGATGCC GGTGCAGTGG GATAGCAAAC CGAACGGCAG CGTGGTCGCC 
ATCGCAGATG ACGCCGGATC GTCGTCCATC ATGGTGGCTG TTGCCGAAGC GCCCGACGCG 
AGTCGGGCGT CGCAACGCCT GTTCCTCTCC GCGCTTCAGC TGGAGCCCGG GGCGACGGTG 
AAGACGATGC TCTCACGATG GGAAAGTGAT ATTGCCCTTC CTTGCACTGT ATACGCCGCC 
AGCCACCGCG AGCGCACGTT CGCCATGACA TGGGTGAGCA AGGTGCTCTC GGGCGAGCAA 
GCCTCTCCGC GTGCCATCAG TGGGCTGCTC GTGTGTTGCA GCGACGGCAC CATGGTGCGC 
TGTTTGCGCA CTAGCATGGC CGATGCTGCC CCTTCTGTAG GCCCTTGGAG CACACCCGAG 
GTACTCGTCA TGGCGGCGGC GTCGGGGCAA GCAAACACCA TTCAGCGCAA TTTCGACGAG 
TCGCCGTCCT TCTCGGCCAC AGCGGTGGCC TCGCCAAGTC GAAACTCAGA TCTTCTCTGC 
GTCGACATGT TTGAGAACAG CAAGCGATTA CTGATGCCGT CGAAGGTGCG GACGACGCAG 
CTGACAGCGA TCCTGTGCGA CGTTGGGACA GAGAGGGTGC GGCTGGCGGC GGTGCGGCAA 
GAAAAGCCGG ATGCCGCGAG CGAAGTGGCA CTCTTCGACA ACGCGGGTCG GGAGTTTGGT 
CGCGTAACGC ACGACGGCGC CGTGTTGCAC AGCAACGACG TGTCTGCAGC ATCTGCCTCG 
AAAGGACCGA TCAGCTATAC ACCCAAAGTG CAGGGGGCGT CCCTGCGTCG GTCCTCGGCG 
GCGGCAGTGG CCACGGCAGC CGAAGCTGCC AACTGCACCG CTATCGCTGC ACACGCGGGG 
GATCGAATCG CCTTCATTGG CTACGATGAC GGTCTTCTGC AGATGGTCGA CACAGCTGAC 
GTGTACGTCT TCTGTCGTCG CTGGGCAACA GACGCGACTG GCGTCGCGCG ACGGATCGTT 
GACGTGCGGT ATGCTGGCTC GGGGGTAGTA GTGGTGCTGT TAGCGAACCA CCACCTCTGC 
AGTTTCGCTG TTCCCCCGCG TAGTCTACTC GACCAACCTT CGCTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_27_0690 cDNA ORF clone, Leishmania infantum JPCM5

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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