LINJ_13_1180 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_13_1180
Entrez Gene ID	5067529
Full Name	putative XPA-interacting protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001464110.1	XP_001464147.1	putative XPA-interacting protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_13_1180 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_13_1180 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc01343	XM_001464110.1 Latest version!	Leishmania infantum JPCM5 putative XPA-interacting protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$139.30 $199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_13_1180 ( XM_001464110.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001464147.1 Leishmania infantum JPCM5 putative XPA-interacting protein partial mRNA.

Price & Availability↑

CloneID	OLc01343
Clone ID Related Accession (Same CDS sequence)	XM_001464110.1
Accession Version	XM_001464110.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 984bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	putative XPA-interacting protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009397). COMPLETENESS: incomplete on both ends.

ATGGTCGACA CATCTTCGTC TGCCGCGGCC TCAGCCTCGC CAGCCGTCAC GACCTCTGCC 
GACGCGACAA CGCCGGTGGT GATCCTTGTG GTAGGCATGG CCGGTACTGG CAAAACAACG 
CTGGTGCATC GCATGCAGCA CTACGCCCAC ACGAGCGGCA TCCGCTCGTA CTTCATCAAT 
CTCGACCCCG CCGTGACCCA CACCCCGTAT AACGTGAACA TCGACATCCG TGACAGCGTG 
CAGTATGGGG AGGTCATGAA GAACTACCGG CTGGGCCCGA ACGGCGCCAT CATGACGTCG 
CTGAACCTCT TCGCCACAAA GATTCACCAG GTCGTGTCGC TGCTGGAGAA GAAGAAGGAG 
ACGCTGGACT GGATCATCGT GGACACACCT GGCCAGATTG AGGTGTTCAC ATGGTCCGCC 
TCAGGGCATC TCATCGCGGA TTCCTTTGGC GCTGTGCTCC CCACGGTGCT CCTCTTTGTC 
GCGGACACGG TGCGTTGTGT GAGCAGCCCG CAAACCTTCG TGTCGACCAT GTTGTACTCG 
AGCGGCATCA TGCTCAAGCA GCAGGTGCCC CTCGTCGTGG TGTTCAACAA GACCGACGTG 
GTCTCTGCAG ACTCGGTGAT TGCGTGGATG CGGGACAACG ACGCGCTCGA CGAGGCCGTG 
ACCAACCCCC GTCGCAGCAA TCAGAGCAGA CGCGCCGTCT CCGGAGAGCC CGGCGATGGC 
GAGGACGCCG ACTGGAGGGG CGAGGGCACG CGCATCGGGG TGGCCGCGCT CGGCTCCCAG 
GACGTGCTGC TCGCCAACCA GGGGAACAGC TATGCGGGGA CACTGGCGCA GTCTATGTCT 
CTGTTTCTGC ATGAGTTCTA CGAAGACTTG CCGTACGCGG CAGTATCGGC GGCATCGGGT 
GCGGGCATGA GCGAGCTCGC AGCCTCCATT GAGCGGGGCA AGCAACAAGC ACTGGAGGCA 
AAGGCAGCGC GTAGTGCACA CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001464147.1
CDS	1..984
Translation	MVDTSSSAAASASPAVTTSADATTPVVILVVGMAGTGKTTLVHRMQHYAHTSGIRSYFINLDPAVTHTPYNVNIDIRDSVQYGEVMKNYRLGPNGAIMTSLNLFATKIHQVVSLLEKKKETLDWIIVDTPGQIEVFTWSASGHLIADSFGAVLPTVLLFVADTVRCVSSPQTFVSTMLYSSGIMLKQQVPLVVVFNKTDVVSADSVIAWMRDNDALDEAVTNPRRSNQSRRAVSGEPGDGEDADWRGEGTRIGVAALGSQDVLLANQGNSYAGTLAQSMSLFLHEFYEDLPYAAVSAASGAGMSELAASIERGKQQALEAKAARSAH

Target ORF information:

RefSeq Version	XM_001464110.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 putative XPA-interacting protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001464110.1

ORF Insert Sequence:

ATGGTCGACA CATCTTCGTC TGCCGCGGCC TCAGCCTCGC CAGCCGTCAC GACCTCTGCC 
GACGCGACAA CGCCGGTGGT GATCCTTGTG GTAGGCATGG CCGGTACTGG CAAAACAACG 
CTGGTGCATC GCATGCAGCA CTACGCCCAC ACGAGCGGCA TCCGCTCGTA CTTCATCAAT 
CTCGACCCCG CCGTGACCCA CACCCCGTAT AACGTGAACA TCGACATCCG TGACAGCGTG 
CAGTATGGGG AGGTCATGAA GAACTACCGG CTGGGCCCGA ACGGCGCCAT CATGACGTCG 
CTGAACCTCT TCGCCACAAA GATTCACCAG GTCGTGTCGC TGCTGGAGAA GAAGAAGGAG 
ACGCTGGACT GGATCATCGT GGACACACCT GGCCAGATTG AGGTGTTCAC ATGGTCCGCC 
TCAGGGCATC TCATCGCGGA TTCCTTTGGC GCTGTGCTCC CCACGGTGCT CCTCTTTGTC 
GCGGACACGG TGCGTTGTGT GAGCAGCCCG CAAACCTTCG TGTCGACCAT GTTGTACTCG 
AGCGGCATCA TGCTCAAGCA GCAGGTGCCC CTCGTCGTGG TGTTCAACAA GACCGACGTG 
GTCTCTGCAG ACTCGGTGAT TGCGTGGATG CGGGACAACG ACGCGCTCGA CGAGGCCGTG 
ACCAACCCCC GTCGCAGCAA TCAGAGCAGA CGCGCCGTCT CCGGAGAGCC CGGCGATGGC 
GAGGACGCCG ACTGGAGGGG CGAGGGCACG CGCATCGGGG TGGCCGCGCT CGGCTCCCAG 
GACGTGCTGC TCGCCAACCA GGGGAACAGC TATGCGGGGA CACTGGCGCA GTCTATGTCT 
CTGTTTCTGC ATGAGTTCTA CGAAGACTTG CCGTACGCGG CAGTATCGGC GGCATCGGGT 
GCGGGCATGA GCGAGCTCGC AGCCTCCATT GAGCGGGGCA AGCAACAAGC ACTGGAGGCA 
AAGGCAGCGC GTAGTGCACA CTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_13_1180 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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