LINJ_03_0850 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_03_0850
Entrez Gene ID	5066294
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001462778.1	XP_001462815.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_03_0850 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_03_0850 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc00306	XM_001462778.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_03_0850 ( XM_001462778.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001462815.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

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CloneID	OLc00306
Clone ID Related Accession (Same CDS sequence)	XM_001462778.1
Accession Version	XM_001462778.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3228bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009388). COMPLETENESS: incomplete on both ends.

ATGTCGACGC CGACAAGAAG TGTGGACATG AAGAAAGGCG TCAGCACTGG CAGCACCACC 
ACAAGCGATG GCATTGTTGA GTTCGAGGCG GTGCCGTCGA CGGCGACGGG CTCCCCCGCG 
GCGGCCGAGC GGCCACACCC GCAGCGGCGG CCTGCGGAGG AGGGCACCCG CACCGGCGGC 
AGTCATTCGC CGTTTGCCGC CGCCACCGCC ACCGCCACAA AAGGGCAGCC GTCTGCCCAT 
CGCACCGGCG GCGCGCATGT GGCCTCTACC CCAGCCAAGG CGGACGCTGC ATCGCGGGAG 
CCCTTCGTAG ACCGCAACGA TCAGATCGAC TTGACCGCGA ACCTCAGCCC GGTGCTGGAT 
AGCGTTCTGG ACCTCTCTGC CCTCATGACC CGCGACGGCG CACTACGTGA GGCACGCATG 
TTCGGAGGTG CTCTAACTGT GTGGGATGTG CTCGAGGCTT ACAAGAGTGC CGCGGAGCAG 
CAGCTGCACG GGTCCGTCTC GCACGGCGGC GAGGCCAGCG TGGATGCAGC AACGAGCGCG 
AAGCTGCCGT CTGCGCTGCT GGGCGGGACG ACGTACAACG CTATAACGGT CCTTAACCTG 
AGTCGCAATC ATCTCACCGC CCTCTGCGCG CTGCCGGCGA CGCTGCTGCG CCTTGACGTC 
AGCGTCAACA ACCTGACGGA GCTGAGCGGG CTGCAGGGGT GTAAGATGTT GACAGTGCTG 
AACGCGCGCC GCAACCGTTT GCGCTCCATC AGCGGGCTCG AGAAGAACCT CAGCGTGGCG 
CATCTCTTCC TGGGTCACAA CGGCATCACT GCGGTCGAGG GCGTCGCCCA CCTCGTCCTT 
CTCGAGACAC TCGACCTCAC GTACAACGAG CTACGCACCT GGGCGTCGCT CCGGATGCTG 
TCGCTGTGCT CGGCCCTGCG ACACCTGCTG CTGCGCGGCA ACCCTATCAT GGAGTCGGGC 
AAGCCGGGCT TCATGGCCGT GTTGCGCAAC CTCTGCCCCA CCCTGCTCGT CGTCGATGAG 
CACCGCATGG CGAACTCGTG TCTGGCAGAC AGGGCCCTTG CACAGCGCAG CTGGGGTCGA 
CAGCCGAACA TGATCAACAA CACGCAGCCG TACGCGCGCA CAGAGACGCT TCGTGTCGGC 
AGCGGTGCTG GTGCATCGCC GTCGCTGCTT TCACACGCGG CCAAGGCCGG TAGCAGCGCC 
TCTGTTGACG GCTCTACCAT GTCGTCGGTC GCGTTCACGT CGTCGAGACG GCGGGAGGGC 
AGTCGGCCGG CACCGTTTGC CGCCGGGGAC GAGGATGTTG CGGATGAGCG GTCGATGAAT 
CTCCTGCACA TGCTAACGCG CGGGGTGACG GCTCCGACGG GCTACGGCGA CTCTGTACGC 
AGCCAACACG CAGCCCAGCA GCTGGCGCAG ACGCGGAGGG AGAAGGAGGC GCAGGCGCAG 
GCGGTGCGGG AGCGGCGACT GACTTCCAAC GGGCGGCTGC TGCGAGGAGC AGTTGTGAAA 
CAGCTGGCCG AGGAGTCACG CAAGTACCTC GAGGACACCA TCGTGCGCCG CATGACGACA 
GCGCAACAAC AACATCTGCA AGGGAACCAC AGTGCTCTGC CCGACGCTGG CGGTGGTAGC 
AGCGATGCAG CCGGTGTGAC CGCGAGCAAC CTGATGGCTC GCCATGGTTC GGTGGAGCGC 
AACGCCTACG GCGGCGTGGC ACACCCGGAG CGGATGGAGA ACCCGATGGC AGACGTGATG 
GGGTACACGG CCGCCTCGCC GGAGAAGCGA CAGCGCGCGT CGACGGAGGG CGGCGTGCAG 
GACAAGACGG ATGCTGAACT CCTCCGCCGA TACAAGCCAC GCGCAGCGCG GCTGCGACGT 
GATCCATCAG CGAAGCCACC GCAGTCGCTG GCCGCGGAAG CCTCGGCAGG CCCACCATCG 
CAACAGCAGC AGCAGGCGCT GCAGCGCCGC ACTGCGAGTG CTGGTCGCGC GCCAAGCCCG 
GCTTCCAACG GTGGTGGTGT TCACCACGGC CGAGCTGTGG TGACTCGGGG ACAGTCGGCA 
AGGCGCACAC ACCGCGACGG CGATGACGCT GCGCTGGCGG CACTCTACGC AGGCGACGCA 
AGAGGGCGTT TCTCGGGAGA AGCCGCACGA GGCGCCAGCG GCTCTTACGC GGCGCTGCAC 
GTCGCGGATC AGCGTCAGCC GCGTGCCCAG GAAGATGCGG AGATTGAGTG CTCGCCCATC 
TCCAAGGATC CACAAGCGCG GGTAGTAGCG TCGTTGAACA CCACCGCATC CATCATCCAC 
GATGATGCCC AGCCCTACCG TGTGAACGAT CCGCCGCACT CTGCTCACCT GCGAATGCCA 
CCGAAATCGA TTCGGAGGCA TCCGAGCCCT ACCGCACAAG CGCACCGCTA CCCCACACCG 
CAGGACTACA GAGAGCCGGC CGAGGTGGAT GTGACGGCTA TCTACCCACG GAGCCGCAGC 
CAGAGAAGCC CCTCACCCGG TGTCGGTGGT GAAACGCAGA AAGGACAGCG GCAGCGCTAT 
CAGCGCATGC CTTCGCGCAG GAATGCGTCC GCGTCGAAGC CGTCGAGTCA GTCGAGGTCG 
ACCTCCGCCG CTGCAGTCGC ATCGAGCGCT GCACGCAGTA GCAGCGTTGG TGGCAGAGGG 
GCGGAGAGCG GCGCCGCTGC ACCGTTGGTG GCATCGTCTG CGGGTGCGAG AAGCCCTTCC 
TTGCGACCGG TGCACATCGA CGACGCTCAG CGTGCGCGCG TGAGGGGGTG GGTGCAGCAG 
CTCCACGACG ACACAGATGC GCTGCAAGAC GCGTTGCAGA CCATCGTCGA CCTCCTTGAG 
GCGCAGCGGC AGAAACGCAT GCCCGTGCCC GAGTCGAGCC GTGAGCTGCC ACCGACGTAC 
CTACAGGAGC GGCGCCGGTG CGTGCAGATC ATCCAGGACA GCGGCATGTT GCAGGACACA 
TATGTGCCGA TGGACGTGGT CGTCTACTAC GGCTTCAGCA AGGCTGAGCT CGAAGGTCAG 
ACGGATCGCA GCATGCAAGT TGTCGCCCGT CGTGGCGGAA ACACGGAGGC CGACGAGCGG 
GCTTGGGCGC GCGAGGTGGC GGAGCGCTCC GACGTGCTGC GGCAGGTACA CCTCATGGGA 
GACGCGAAGA CGTGCCTGCG ATACGTGGCG CTGCTCGTCG GCGACGGCCG CGAAAAGCTA 
CTGCAGCAGT ACGTGGATCA GTTGAAAGAG AGCCTGCGTA GCGTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001462815.1
CDS	1..3228
Translation	MSTPTRSVDMKKGVSTGSTTTSDGIVEFEAVPSTATGSPAAAERPHPQRRPAEEGTRTGGSHSPFAAATATATKGQPSAHRTGGAHVASTPAKADAASREPFVDRNDQIDLTANLSPVLDSVLDLSALMTRDGALREARMFGGALTVWDVLEAYKSAAEQQLHGSVSHGGEASVDAATSAKLPSALLGGTTYNAITVLNLSRNHLTALCALPATLLRLDVSVNNLTELSGLQGCKMLTVLNARRNRLRSISGLEKNLSVAHLFLGHNGITAVEGVAHLVLLETLDLTYNELRTWASLRMLSLCSALRHLLLRGNPIMESGKPGFMAVLRNLCPTLLVVDEHRMANSCLADRALAQRSWGRQPNMINNTQPYARTETLRVGSGAGASPSLLSHAAKAGSSASVDGSTMSSVAFTSSRRREGSRPAPFAAGDEDVADERSMNLLHMLTRGVTAPTGYGDSVRSQHAAQQLAQTRREKEAQAQAVRERRLTSNGRLLRGAVVKQLAEESRKYLEDTIVRRMTTAQQQHLQGNHSALPDAGGGSSDAAGVTASNLMARHGSVERNAYGGVAHPERMENPMADVMGYTAASPEKRQRASTEGGVQDKTDAELLRRYKPRAARLRRDPSAKPPQSLAAEASAGPPSQQQQQALQRRTASAGRAPSPASNGGGVHHGRAVVTRGQSARRTHRDGDDAALAALYAGDARGRFSGEAARGASGSYAALHVADQRQPRAQEDAEIECSPISKDPQARVVASLNTTASIIHDDAQPYRVNDPPHSAHLRMPPKSIRRHPSPTAQAHRYPTPQDYREPAEVDVTAIYPRSRSQRSPSPGVGGETQKGQRQRYQRMPSRRNASASKPSSQSRSTSAAAVASSAARSSSVGGRGAESGAAAPLVASSAGARSPSLRPVHIDDAQRARVRGWVQQLHDDTDALQDALQTIVDLLEAQRQKRMPVPESSRELPPTYLQERRRCVQIIQDSGMLQDTYVPMDVVVYYGFSKAELEGQTDRSMQVVARRGGNTEADERAWAREVAERSDVLRQVHLMGDAKTCLRYVALLVGDGREKLLQQYVDQLKESLRSV

Target ORF information:

RefSeq Version	XM_001462778.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001462778.1

ORF Insert Sequence:

ATGTCGACGC CGACAAGAAG TGTGGACATG AAGAAAGGCG TCAGCACTGG CAGCACCACC 
ACAAGCGATG GCATTGTTGA GTTCGAGGCG GTGCCGTCGA CGGCGACGGG CTCCCCCGCG 
GCGGCCGAGC GGCCACACCC GCAGCGGCGG CCTGCGGAGG AGGGCACCCG CACCGGCGGC 
AGTCATTCGC CGTTTGCCGC CGCCACCGCC ACCGCCACAA AAGGGCAGCC GTCTGCCCAT 
CGCACCGGCG GCGCGCATGT GGCCTCTACC CCAGCCAAGG CGGACGCTGC ATCGCGGGAG 
CCCTTCGTAG ACCGCAACGA TCAGATCGAC TTGACCGCGA ACCTCAGCCC GGTGCTGGAT 
AGCGTTCTGG ACCTCTCTGC CCTCATGACC CGCGACGGCG CACTACGTGA GGCACGCATG 
TTCGGAGGTG CTCTAACTGT GTGGGATGTG CTCGAGGCTT ACAAGAGTGC CGCGGAGCAG 
CAGCTGCACG GGTCCGTCTC GCACGGCGGC GAGGCCAGCG TGGATGCAGC AACGAGCGCG 
AAGCTGCCGT CTGCGCTGCT GGGCGGGACG ACGTACAACG CTATAACGGT CCTTAACCTG 
AGTCGCAATC ATCTCACCGC CCTCTGCGCG CTGCCGGCGA CGCTGCTGCG CCTTGACGTC 
AGCGTCAACA ACCTGACGGA GCTGAGCGGG CTGCAGGGGT GTAAGATGTT GACAGTGCTG 
AACGCGCGCC GCAACCGTTT GCGCTCCATC AGCGGGCTCG AGAAGAACCT CAGCGTGGCG 
CATCTCTTCC TGGGTCACAA CGGCATCACT GCGGTCGAGG GCGTCGCCCA CCTCGTCCTT 
CTCGAGACAC TCGACCTCAC GTACAACGAG CTACGCACCT GGGCGTCGCT CCGGATGCTG 
TCGCTGTGCT CGGCCCTGCG ACACCTGCTG CTGCGCGGCA ACCCTATCAT GGAGTCGGGC 
AAGCCGGGCT TCATGGCCGT GTTGCGCAAC CTCTGCCCCA CCCTGCTCGT CGTCGATGAG 
CACCGCATGG CGAACTCGTG TCTGGCAGAC AGGGCCCTTG CACAGCGCAG CTGGGGTCGA 
CAGCCGAACA TGATCAACAA CACGCAGCCG TACGCGCGCA CAGAGACGCT TCGTGTCGGC 
AGCGGTGCTG GTGCATCGCC GTCGCTGCTT TCACACGCGG CCAAGGCCGG TAGCAGCGCC 
TCTGTTGACG GCTCTACCAT GTCGTCGGTC GCGTTCACGT CGTCGAGACG GCGGGAGGGC 
AGTCGGCCGG CACCGTTTGC CGCCGGGGAC GAGGATGTTG CGGATGAGCG GTCGATGAAT 
CTCCTGCACA TGCTAACGCG CGGGGTGACG GCTCCGACGG GCTACGGCGA CTCTGTACGC 
AGCCAACACG CAGCCCAGCA GCTGGCGCAG ACGCGGAGGG AGAAGGAGGC GCAGGCGCAG 
GCGGTGCGGG AGCGGCGACT GACTTCCAAC GGGCGGCTGC TGCGAGGAGC AGTTGTGAAA 
CAGCTGGCCG AGGAGTCACG CAAGTACCTC GAGGACACCA TCGTGCGCCG CATGACGACA 
GCGCAACAAC AACATCTGCA AGGGAACCAC AGTGCTCTGC CCGACGCTGG CGGTGGTAGC 
AGCGATGCAG CCGGTGTGAC CGCGAGCAAC CTGATGGCTC GCCATGGTTC GGTGGAGCGC 
AACGCCTACG GCGGCGTGGC ACACCCGGAG CGGATGGAGA ACCCGATGGC AGACGTGATG 
GGGTACACGG CCGCCTCGCC GGAGAAGCGA CAGCGCGCGT CGACGGAGGG CGGCGTGCAG 
GACAAGACGG ATGCTGAACT CCTCCGCCGA TACAAGCCAC GCGCAGCGCG GCTGCGACGT 
GATCCATCAG CGAAGCCACC GCAGTCGCTG GCCGCGGAAG CCTCGGCAGG CCCACCATCG 
CAACAGCAGC AGCAGGCGCT GCAGCGCCGC ACTGCGAGTG CTGGTCGCGC GCCAAGCCCG 
GCTTCCAACG GTGGTGGTGT TCACCACGGC CGAGCTGTGG TGACTCGGGG ACAGTCGGCA 
AGGCGCACAC ACCGCGACGG CGATGACGCT GCGCTGGCGG CACTCTACGC AGGCGACGCA 
AGAGGGCGTT TCTCGGGAGA AGCCGCACGA GGCGCCAGCG GCTCTTACGC GGCGCTGCAC 
GTCGCGGATC AGCGTCAGCC GCGTGCCCAG GAAGATGCGG AGATTGAGTG CTCGCCCATC 
TCCAAGGATC CACAAGCGCG GGTAGTAGCG TCGTTGAACA CCACCGCATC CATCATCCAC 
GATGATGCCC AGCCCTACCG TGTGAACGAT CCGCCGCACT CTGCTCACCT GCGAATGCCA 
CCGAAATCGA TTCGGAGGCA TCCGAGCCCT ACCGCACAAG CGCACCGCTA CCCCACACCG 
CAGGACTACA GAGAGCCGGC CGAGGTGGAT GTGACGGCTA TCTACCCACG GAGCCGCAGC 
CAGAGAAGCC CCTCACCCGG TGTCGGTGGT GAAACGCAGA AAGGACAGCG GCAGCGCTAT 
CAGCGCATGC CTTCGCGCAG GAATGCGTCC GCGTCGAAGC CGTCGAGTCA GTCGAGGTCG 
ACCTCCGCCG CTGCAGTCGC ATCGAGCGCT GCACGCAGTA GCAGCGTTGG TGGCAGAGGG 
GCGGAGAGCG GCGCCGCTGC ACCGTTGGTG GCATCGTCTG CGGGTGCGAG AAGCCCTTCC 
TTGCGACCGG TGCACATCGA CGACGCTCAG CGTGCGCGCG TGAGGGGGTG GGTGCAGCAG 
CTCCACGACG ACACAGATGC GCTGCAAGAC GCGTTGCAGA CCATCGTCGA CCTCCTTGAG 
GCGCAGCGGC AGAAACGCAT GCCCGTGCCC GAGTCGAGCC GTGAGCTGCC ACCGACGTAC 
CTACAGGAGC GGCGCCGGTG CGTGCAGATC ATCCAGGACA GCGGCATGTT GCAGGACACA 
TATGTGCCGA TGGACGTGGT CGTCTACTAC GGCTTCAGCA AGGCTGAGCT CGAAGGTCAG 
ACGGATCGCA GCATGCAAGT TGTCGCCCGT CGTGGCGGAA ACACGGAGGC CGACGAGCGG 
GCTTGGGCGC GCGAGGTGGC GGAGCGCTCC GACGTGCTGC GGCAGGTACA CCTCATGGGA 
GACGCGAAGA CGTGCCTGCG ATACGTGGCG CTGCTCGTCG GCGACGGCCG CGAAAAGCTA 
CTGCAGCAGT ACGTGGATCA GTTGAAAGAG AGCCTGCGTA GCGTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_03_0850 cDNA ORF clone, Leishmania infantum JPCM5

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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