LINJ_06_0390 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_06_0390
Entrez Gene ID	4961360
Full Name	conserved hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_001463084.1	XP_001463121.1	conserved hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_06_0390 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_06_0390 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc00082	XM_001463084.1 Latest version!	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_06_0390 ( XM_001463084.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_001463121.1 Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc00082
Clone ID Related Accession (Same CDS sequence)	XM_001463084.1
Accession Version	XM_001463084.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2724bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	conserved hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009277). COMPLETENESS: incomplete on both ends.

ATGACTTACT GCATACCACC ACGCGTAGTG CGGCGGCTGT GTGACTCGGA GTGGTTCAAA 
ACAGAGTTTT TAGACAAGGA GACTGGGACT GTCAACCACG ATCTCGCCGT GGTCAGCAGC 
CAGTGCAGAA GTGTGGGTCA AGCAAGCAAA CATGAATGTG CCCAGCTCAT CTCTTCATCC 
TTTCGGCCGT TCATTGAGAA AGTGCTTCCT TTACCGGCAA GTGCATGCGA CAGCGTTGCG 
GCAGAGTGCG GCGGGTGTTG GTTTTGGGAA ACGTATCGGC ATGCTTTGTT CGGGGAGAAC 
GTGCTCATTC ATCTGGGCGG CTCTGGCATT TCACTGGCAG AAGACAGACT CGACGCACAA 
GTCGAGCTGC GATTGAGGAT GTGCGCAAGC AACACCTTGG CTTTGCCATC CCAGCACCGC 
ACAAAGGTGC TGCTGCATGG TTCAGCAAAG CTAGAGGTTG TTTACGCTCT CGCTCTGTCT 
GTCGCGCTTC ATGTGGCAAA ACAGCCGCTG CTAGAGCATG GAGAAGGGCC TCAGGCGCTG 
GTCTTGTGCG CGACCAAGGA CCAGTGCGAT GAGATAGCGT GCGCTTTGAA CGAGTTCTGC 
GCCTCACTAC ACCTAATTGT GCACAACCTC TTTGAGCCAT ATCCACCGAT GCCGGCAGAC 
AAGCGCGCCG AGGTTGTCGT CGCCACTCCG CCGTTATGGG AAAGCTTGGC AAAGTTTATG 
CAGCACCCCA ATCATGCACG CCTGGGCACC GCGTCTCAGA ACGAAGGATT GGAGGACTTG 
CTTCTGAAGG TGGAGGGAGA AGGCCAGCTA CCACCAACGT ACGACCTCAC ACGATGGCGT 
CCTTATAATA TTACGCACGT GGCGCAGCTT GTCATCTTCG ATGTGGAGCT GCAGATAAAC 
ATGGGGTTCG GGGCTCTTCT AAAGCATCTT CTCGGACTTC CACATGAAAC ATTTCCTGTA 
CGTTGCAAAT TGGAGAGCTC CTCCGCCGTG GGCAAGCTGC CTCTCTCGTG TCAACTGTAT 
GCCGTTGCAG GTGGCGATCG ATTTGCCGTC GAAGCGGATA CCGTGCGTTC ACTGCTCGAA 
GCAATCCGTA CCAATGGACG ACTCCGATTT AATCATGGTA CCGCAGAGCT TTCACTGGTC 
AGCCCCCGTC CTGTACTTGA TTCTGATGAA GACGGTCGCG CACCGCTCTC GCATGGCGTT 
CGCAAACGAC AACGGACGGA GGACGGGCTG GGTGATCACA GCGGGCAGGA AAGGCCGTGG 
AAAGCCAATG CCACCACCTT ACGACATGGC AACGGCACGT CTTTCGAAGG CATTCTTATC 
CGAAGCGCAT TGTCGCACGG ACGACTCCTC GCCGACTTCA CCGCGTTTAC TGATTTTGTC 
AGTCGCGTGA TGCAGGAGGC CAGCACCTTT TGGGAGAGCT TTGAGAGCGG CATTTGCGAC 
GACTCGGGCT CCCACGGGAC GCCGTCACCA GCCTCGTCGC CCCTGACAAC TGGCAACAAG 
GTGAGGGATG TAGATCGATT TCCTACCTCA GCCGCTTCCG CATCTTTTCT CCAGTGCGCG 
CGCGTGGAGC TGGCTCTCGT TTGCACTAAC TCAGCCAACC CCGGTTCCCA TTCATGCTTT 
GCAGCGTCCG AGACCTACCG TGCTCAGGAG GTGGGTGTGT GGGTGCATTC TGCCCCGTCC 
TCTCCTGCAA GCCTCTCGTC CCGTCTGACG CTCTTGTTCC AGCACTTGAA TGATCGGTTG 
AATGGCGAGC TGTTTGACGG CAGCGTTGTA CAGTGCGTCC TGGCAAGTGA CATGGCGCGC 
CTGCCCTTCA CACTTAGCCC CATCACCGCA TCAGCAACAG ACGGTGAAGG CAGTCGTTTG 
GTGCAGCAAC ATGAACTGTT CTGTTATGGC CCCAATCTCA TGCAACCAGC TCTGCTGTGT 
GCTGCCCGAA AAAGTGGGGA TGAGGCTGCG GCTGCAGCAG CGGCGCGCAA CGCCGAACGC 
GTTGAGACTC TATCTGTGGT GGAAGAGCTC ACCGCTGCCA CGAAGGGCGC AGAGAGGTCT 
CCTGGATGTG TGCCGAGGTG TTGCTTCTTG TCAACGCCTC CCCACGCAGG CCAGGCCGCC 
TCATCATCGC GGGGGAGCAC CGTTGCTCCA TCGGATGTCA GCACTGTGTT GGTGGTGCGC 
CACGTAGCCC CATCGAGCGT TGCCTTGTGC GGTGGAGAGA GAACCACCAG CTCACAAACG 
TGTCCACCAG GGGAGGTGAA ACCGCTGGCG CTTTACTTGC TGGAGGAGTG CTGCCAATAC 
GGACGCGTTT TGTCGTACTA CGCTTATGAA GCCACTCGGA CGACGGTCGT GGACGCCGTA 
GAGGACGGGC AGGAAGCTGG AGGTAGCGAC GGGGAGGCGC TTGCAGCGCG AACAGAAACA 
GCGATGGAGC AAGGGCAGCC ACTTGCCACT GAGGGACAGC TCACAACTGC GTCTCTCTTT 
ATTGAGTTCG CCAGTGCCGA TTCTGCAGTA GAGGCGGTTC GGCTCCTTTC GCGCCGTTTC 
GCCTTCCAAC ACCAGCAGTC GCAGTCGCAA GGTGCACCTG CTCGCCTTCC GCGGGCTCGC 
CTGTTCACCA ATCGCACATA CTACGAGGGC GTGCGGCAGG AGCTGTCATC GCAGATGCTC 
TACGACGGAA CTATGGGCAG AGACCAGAGC AGCGATGACG ACAGTCGCTT CAGTGACCTT 
CACATATCCT TACTCGCGGA GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_001463121.1
CDS	1..2724
Translation	MTYCIPPRVVRRLCDSEWFKTEFLDKETGTVNHDLAVVSSQCRSVGQASKHECAQLISSSFRPFIEKVLPLPASACDSVAAECGGCWFWETYRHALFGENVLIHLGGSGISLAEDRLDAQVELRLRMCASNTLALPSQHRTKVLLHGSAKLEVVYALALSVALHVAKQPLLEHGEGPQALVLCATKDQCDEIACALNEFCASLHLIVHNLFEPYPPMPADKRAEVVVATPPLWESLAKFMQHPNHARLGTASQNEGLEDLLLKVEGEGQLPPTYDLTRWRPYNITHVAQLVIFDVELQINMGFGALLKHLLGLPHETFPVRCKLESSSAVGKLPLSCQLYAVAGGDRFAVEADTVRSLLEAIRTNGRLRFNHGTAELSLVSPRPVLDSDEDGRAPLSHGVRKRQRTEDGLGDHSGQERPWKANATTLRHGNGTSFEGILIRSALSHGRLLADFTAFTDFVSRVMQEASTFWESFESGICDDSGSHGTPSPASSPLTTGNKVRDVDRFPTSAASASFLQCARVELALVCTNSANPGSHSCFAASETYRAQEVGVWVHSAPSSPASLSSRLTLLFQHLNDRLNGELFDGSVVQCVLASDMARLPFTLSPITASATDGEGSRLVQQHELFCYGPNLMQPALLCAARKSGDEAAAAAAARNAERVETLSVVEELTAATKGAERSPGCVPRCCFLSTPPHAGQAASSSRGSTVAPSDVSTVLVVRHVAPSSVALCGGERTTSSQTCPPGEVKPLALYLLEECCQYGRVLSYYAYEATRTTVVDAVEDGQEAGGSDGEALAARTETAMEQGQPLATEGQLTTASLFIEFASADSAVEAVRLLSRRFAFQHQQSQSQGAPARLPRARLFTNRTYYEGVRQELSSQMLYDGTMGRDQSSDDDSRFSDLHISLLAE

Target ORF information:

RefSeq Version	XM_001463084.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 conserved hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_001463084.1

ORF Insert Sequence:

ATGACTTACT GCATACCACC ACGCGTAGTG CGGCGGCTGT GTGACTCGGA GTGGTTCAAA 
ACAGAGTTTT TAGACAAGGA GACTGGGACT GTCAACCACG ATCTCGCCGT GGTCAGCAGC 
CAGTGCAGAA GTGTGGGTCA AGCAAGCAAA CATGAATGTG CCCAGCTCAT CTCTTCATCC 
TTTCGGCCGT TCATTGAGAA AGTGCTTCCT TTACCGGCAA GTGCATGCGA CAGCGTTGCG 
GCAGAGTGCG GCGGGTGTTG GTTTTGGGAA ACGTATCGGC ATGCTTTGTT CGGGGAGAAC 
GTGCTCATTC ATCTGGGCGG CTCTGGCATT TCACTGGCAG AAGACAGACT CGACGCACAA 
GTCGAGCTGC GATTGAGGAT GTGCGCAAGC AACACCTTGG CTTTGCCATC CCAGCACCGC 
ACAAAGGTGC TGCTGCATGG TTCAGCAAAG CTAGAGGTTG TTTACGCTCT CGCTCTGTCT 
GTCGCGCTTC ATGTGGCAAA ACAGCCGCTG CTAGAGCATG GAGAAGGGCC TCAGGCGCTG 
GTCTTGTGCG CGACCAAGGA CCAGTGCGAT GAGATAGCGT GCGCTTTGAA CGAGTTCTGC 
GCCTCACTAC ACCTAATTGT GCACAACCTC TTTGAGCCAT ATCCACCGAT GCCGGCAGAC 
AAGCGCGCCG AGGTTGTCGT CGCCACTCCG CCGTTATGGG AAAGCTTGGC AAAGTTTATG 
CAGCACCCCA ATCATGCACG CCTGGGCACC GCGTCTCAGA ACGAAGGATT GGAGGACTTG 
CTTCTGAAGG TGGAGGGAGA AGGCCAGCTA CCACCAACGT ACGACCTCAC ACGATGGCGT 
CCTTATAATA TTACGCACGT GGCGCAGCTT GTCATCTTCG ATGTGGAGCT GCAGATAAAC 
ATGGGGTTCG GGGCTCTTCT AAAGCATCTT CTCGGACTTC CACATGAAAC ATTTCCTGTA 
CGTTGCAAAT TGGAGAGCTC CTCCGCCGTG GGCAAGCTGC CTCTCTCGTG TCAACTGTAT 
GCCGTTGCAG GTGGCGATCG ATTTGCCGTC GAAGCGGATA CCGTGCGTTC ACTGCTCGAA 
GCAATCCGTA CCAATGGACG ACTCCGATTT AATCATGGTA CCGCAGAGCT TTCACTGGTC 
AGCCCCCGTC CTGTACTTGA TTCTGATGAA GACGGTCGCG CACCGCTCTC GCATGGCGTT 
CGCAAACGAC AACGGACGGA GGACGGGCTG GGTGATCACA GCGGGCAGGA AAGGCCGTGG 
AAAGCCAATG CCACCACCTT ACGACATGGC AACGGCACGT CTTTCGAAGG CATTCTTATC 
CGAAGCGCAT TGTCGCACGG ACGACTCCTC GCCGACTTCA CCGCGTTTAC TGATTTTGTC 
AGTCGCGTGA TGCAGGAGGC CAGCACCTTT TGGGAGAGCT TTGAGAGCGG CATTTGCGAC 
GACTCGGGCT CCCACGGGAC GCCGTCACCA GCCTCGTCGC CCCTGACAAC TGGCAACAAG 
GTGAGGGATG TAGATCGATT TCCTACCTCA GCCGCTTCCG CATCTTTTCT CCAGTGCGCG 
CGCGTGGAGC TGGCTCTCGT TTGCACTAAC TCAGCCAACC CCGGTTCCCA TTCATGCTTT 
GCAGCGTCCG AGACCTACCG TGCTCAGGAG GTGGGTGTGT GGGTGCATTC TGCCCCGTCC 
TCTCCTGCAA GCCTCTCGTC CCGTCTGACG CTCTTGTTCC AGCACTTGAA TGATCGGTTG 
AATGGCGAGC TGTTTGACGG CAGCGTTGTA CAGTGCGTCC TGGCAAGTGA CATGGCGCGC 
CTGCCCTTCA CACTTAGCCC CATCACCGCA TCAGCAACAG ACGGTGAAGG CAGTCGTTTG 
GTGCAGCAAC ATGAACTGTT CTGTTATGGC CCCAATCTCA TGCAACCAGC TCTGCTGTGT 
GCTGCCCGAA AAAGTGGGGA TGAGGCTGCG GCTGCAGCAG CGGCGCGCAA CGCCGAACGC 
GTTGAGACTC TATCTGTGGT GGAAGAGCTC ACCGCTGCCA CGAAGGGCGC AGAGAGGTCT 
CCTGGATGTG TGCCGAGGTG TTGCTTCTTG TCAACGCCTC CCCACGCAGG CCAGGCCGCC 
TCATCATCGC GGGGGAGCAC CGTTGCTCCA TCGGATGTCA GCACTGTGTT GGTGGTGCGC 
CACGTAGCCC CATCGAGCGT TGCCTTGTGC GGTGGAGAGA GAACCACCAG CTCACAAACG 
TGTCCACCAG GGGAGGTGAA ACCGCTGGCG CTTTACTTGC TGGAGGAGTG CTGCCAATAC 
GGACGCGTTT TGTCGTACTA CGCTTATGAA GCCACTCGGA CGACGGTCGT GGACGCCGTA 
GAGGACGGGC AGGAAGCTGG AGGTAGCGAC GGGGAGGCGC TTGCAGCGCG AACAGAAACA 
GCGATGGAGC AAGGGCAGCC ACTTGCCACT GAGGGACAGC TCACAACTGC GTCTCTCTTT 
ATTGAGTTCG CCAGTGCCGA TTCTGCAGTA GAGGCGGTTC GGCTCCTTTC GCGCCGTTTC 
GCCTTCCAAC ACCAGCAGTC GCAGTCGCAA GGTGCACCTG CTCGCCTTCC GCGGGCTCGC 
CTGTTCACCA ATCGCACATA CTACGAGGGC GTGCGGCAGG AGCTGTCATC GCAGATGCTC 
TACGACGGAA CTATGGGCAG AGACCAGAGC AGCGATGACG ACAGTCGCTT CAGTGACCTT 
CACATATCCT TACTCGCGGA GTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_06_0390 cDNA ORF clone, Leishmania infantum JPCM5

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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