LINJ_03_0440 cDNA ORF clone, Leishmania infantum JPCM5

Gene
Clones
gRNAs

Summary

Gene Symbol	LINJ_03_0440
Entrez Gene ID	10966322
Full Name	hypothetical protein
Gene Type	protein-coding
Organism	Leishmania infantum JPCM5

mRNA and Protein(s)

mRNA	Protein	Name
XM_003392139.1	XP_003392187.1	hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Rogers MB, Hilley JD, Dickens NJ, Wilkes J, Bates PA, Depledge DP, Harris D, Her Y, Herzyk P, Imamura H, Otto TD, Sanders M, Seeger K, Dujardin JC, Berriman M, Smith DF, Hertz-Fowler C, Mottram JC
Genome research21(12)2129-42(2011 Dec)

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Peacock CS, Seeger K, Harris D, Murphy L, Ruiz JC, Quail MA, Peters N, Adlem E, Tivey A, Aslett M, Kerhornou A, Ivens A, Fraser A, Rajandream MA, Carver T, Norbertczak H, Chillingworth T, Hance Z, Jagels K, Moule S, Ormond D, Rutter S, Squares R, Whitehead S, Rabbinowitsch E, Arrowsmith C, White B, Thurston S, Bringaud F, Baldauf SL, Faulconbridge A, Jeffares D, Depledge DP, Oyola SO, Hilley JD, Brito LO, Tosi LR, Barrell B, Cruz AK, Mottram JC, Smith DF, Berriman M
Nature genetics39(7)839-47(2007 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following LINJ_03_0440 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LINJ_03_0440 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OLc07619	XM_003392139.1 Latest version!	Leishmania infantum JPCM5 hypothetical protein partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LINJ_03_0440 ( XM_003392139.1 ) cDNA ORF clone, Leishmania infantum JPCM5 -> XP_003392187.1 Leishmania infantum JPCM5 hypothetical protein partial mRNA.

Price & Availability↑

CloneID	OLc07619
Clone ID Related Accession (Same CDS sequence)	XM_003392139.1
Accession Version	XM_003392139.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3183bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1436889600000
Organism	Leishmania infantum JPCM5
Product	hypothetical protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_009388). COMPLETENESS: incomplete on both ends.

ATGTTGGGTC GCTCCGCGCA CGAAACGATG CGGGCACCGG CGCTAGCCTC CTGGCAGCCG 
CAGGAGCCGC GTGGAACGGA TTCGGCCCTG TCGTTGTCAC CGCAGCAGCG TCCATCGCTG 
TCGCTGAGGT CGCCGCCGAG TACGCCGCAA CAGCGCGACG GTGGACGCCA TCCGTATCCA 
CACCACCATC GTCATCAGTA TCAGCAGCGC GCGAATCAGC AGCAGCAGCG CACGCCTCGC 
GCTGGCGCGG CCGCCCCTCC ACCGTACTCG GATCGCAGTG ATGCTGCGTC TGCCGGCGAG 
TTGGTGTCAC CGCTCATGCG CTCACCGAGG ATGCCCTCGC CGCTTCAGTA TCAGCAGCAG 
CATCACAGGC GATATCGCTC CTCTCTGCCG GCACCGCCGC CGCTGCGCAG CCTGACGCTC 
TCGTCAGACC GCGTATCTCT GCGACTCGCA CGCGCACATG CGTCGCACCA CCAGCAGCGT 
ACCCATCACG TTGACCAGAG CGATAGCCCC GCCACGCGTC ACGCTCCCCC GCTGTCGATC 
GCCGCCTTGG AAGAGCACGA CTCAGCGAGT GCCACGGCCC GGCAAGGGTC TCGTGCCCAT 
AATCGGCGAC ACACACGCGG TCGCAGCAAC GTGCAACTGC ACCTCTCAGC GCCGGTGCTG 
AGCAACAACC AAGCGGAAGA CAAGGCGCAC CTGTCCACGC CGGTGGATCA GCGCATCCCG 
GCCATGGTGC CACCGTCGTA TGATGTGTAC AACCTCGACA TGCCTGGCGC TGGTATGCGT 
GAAGCAGCAG CAGGAGCGAC GCGTGGTGCC TACGCGTCGT CATCGCTCAC CTCACAGGCG 
TACCAGCTCA AAACTGCGCA GCCGCAGCCG CAGCTCCTGC ACACGCTGAA GCTGGTGGAC 
GGTGTGTGGC GAGTCGTCGT ACCTCCGCAG CAGCAGCCAC CGACATCCGG GCCACAACTG 
CAGCGTGGCA CGGCCGCCCA CCAGCGCCAT GGCAACCCCG CATGCCACTC GCCCAGGAAT 
CACAGCTGCG ACTGGTGCGG TGGTTTGGAC AACAGCGAGG CGGCGTCGGC CACGGAGGCC 
GCCTCGCCGA CAAGGTGTCA CGGCGCCAAG AGCCCAACAT ACAGGATTCC GACAGCGACC 
ACCTTCACCG CCGCCGGCAC GCCGTGCGGC CTGTCTATGT CGGCGTGCGG TGGTGACTGG 
AGGTCGCCGT GCCTCGCGGC GGCGAATATG TGGTGTCACC ACCAGCACTA TCCGCTGCAG 
TGCCACGCTC GCACCACGCC TGCGTCCGTC GCGATGCGCA GCAGCAGTGT CGGCCTGTCC 
GACGGCGTTG ACACGGCTCT TTCTCCCGCC TCCACCCCTG CGCGTGCGCC GCGTACGCCA 
CGGCGACAGC AGCAGCAACC TCACCTACCG CACGGTCGGT ATGGCGCTCA CCACCACTGC 
GGCGTCCACT CGCCATCGGC CCCTTCCTTC GCTTCCGAAG AGGCGTACGC CACGTGCGGG 
CAGTGCAACA CGCCACACGA GGCCGATCTG GCAGCCGGCA CGCCGTCGTC GGCGGTTCCC 
CGCGCCGCTG CCTCGGTGGC CGGGCGGGGC TACCAGCAAG CGCTGATGAC ACCAACAATC 
GTGATTGCCA GGGCGACACC GGCGACCGCC CGCGACGCGC TCACCGCCAC CACGGTGACA 
GACGCTCGAT GGGGCTTTAC CAACTCTGCC GCCGCCTCCA CATCCGTCGG GTCAACGCTG 
CAGCACGACA ACGCGCGCAC GACGCTGCCA TCAATCGCCT CTGTCTCTGC TGCTACGGCC 
ACAGCCGATG GAGGCCGCGG CGGCGCAGTG GCGGTCCATG ACGACGACGA CGACGACGAC 
GCGGCACTGC TGTACGCCTC CTCCTCGGCC TACCTGCGTT ATCAACGTAA TGCAGACTTT 
CTCTACGCCG TCGACGACGC CGACGAGTGC GAGGCCGCCG CGGCGCCGAC GGCCAGAGGT 
GCCACAGCGT TGGGCAATGC GCTCATGCTC GCAGCCACGC AAGCCACCGC GGCCATGGAC 
TCGCCAGTTA CGGTGTCCTC CCGCTCGGCC TCCTCCTCCC CAGCGCCGTC TTCTGTGTAC 
TACAGTCCGC AGCAGTTTCG CGTCGGCGAC CTGCAGCAGA GCGCACCGGC GACAGCAACG 
ACGACGCCGG CGCTTCGCAT GCGTCAGCCA CACAACTGGG CGCTATACGG CCAACGTGGC 
ACACACACGG TTTCGCAACC TTCTCACGCT GGCAGCGGCA GCATTCTCCA CAGCTGCACA 
GCCGTGACCC CGCTGCGGTG CTCGTGCCGC GACGCGGCTG GGTGGGCCGG CCCCAACGTT 
CTGACGACCC CACGAAGCGC CTGCTGCGGT GCCCCCAGCG CAGGAGAGGG ATGGCGGTCC 
CCGATGCAGT GGAACCCGCG CCAGGCTCGT GACGACCTCG AGATGGAGGC CGTGAAGCAC 
GTCGCGCAGT TTGCCTTGGC ACAGGTGGCC GCCACAGCAG CAGCAGCGGC ACCGTCAACC 
GGCTTGTCTT CGGTCTCGTT CTCTCCCTCG TACGCCACGG TATCTTGGAA CACTGTGGCG 
CAGGAGGCGG CGGTTGCCGT TTCGCCGTCG CACGCGCGGG ATGGGAGCCG AGCGGAAGAG 
ACGCGCGATG ACTCAGTGAG TCAGGACACC GTCGCCCTTG ACGGAGAGGA GGCGGCGGCG 
GAGTGGCTGG AGCTGCTTCT ACACTATCGT GACCGAGAAA ACGAAAGTGG ACGCATTCGC 
CGCGCTCTCG TTGATGCCTC AGCGGCCGCG CAGGCACCAC CAACAGAGGC CGGGGGTAGC 
AGCAACCCCA GCGCTGCCGC GGCTGCCGTG ACGACGGCAA CGACGATCTC GTGGTGGGCC 
ACCTCGTCCC TTATGCGTGA AGGGTTTCCG TCTCGCGATG ATGGAAGTGC GCTACAGCAG 
CAGCAGCAAC AGAGGCGGCA GCGGCATCAC GCTGGAACTC TGCCCGCTGT ATCTTTTCCA 
TCGATGGCAA CAACAACAGG AGCAGCGTTG GCGCCACCAC CGGCGCAGCT GTGTACCGCC 
ATGAGTGCAC ACAGGGCAGC TCGCACAATA TCGCGGTGTG TGCGCCATAA CGTGTGGCGC 
ATGCGCGAGA ACGAGCGCCA GCGCCTCTCT GCCTCCGTCG CCGCACGCGT CGCAGCGCGG 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_003392187.1
CDS	1..3183
Translation	MLGRSAHETMRAPALASWQPQEPRGTDSALSLSPQQRPSLSLRSPPSTPQQRDGGRHPYPHHHRHQYQQRANQQQQRTPRAGAAAPPPYSDRSDAASAGELVSPLMRSPRMPSPLQYQQQHHRRYRSSLPAPPPLRSLTLSSDRVSLRLARAHASHHQQRTHHVDQSDSPATRHAPPLSIAALEEHDSASATARQGSRAHNRRHTRGRSNVQLHLSAPVLSNNQAEDKAHLSTPVDQRIPAMVPPSYDVYNLDMPGAGMREAAAGATRGAYASSSLTSQAYQLKTAQPQPQLLHTLKLVDGVWRVVVPPQQQPPTSGPQLQRGTAAHQRHGNPACHSPRNHSCDWCGGLDNSEAASATEAASPTRCHGAKSPTYRIPTATTFTAAGTPCGLSMSACGGDWRSPCLAAANMWCHHQHYPLQCHARTTPASVAMRSSSVGLSDGVDTALSPASTPARAPRTPRRQQQQPHLPHGRYGAHHHCGVHSPSAPSFASEEAYATCGQCNTPHEADLAAGTPSSAVPRAAASVAGRGYQQALMTPTIVIARATPATARDALTATTVTDARWGFTNSAAASTSVGSTLQHDNARTTLPSIASVSAATATADGGRGGAVAVHDDDDDDDAALLYASSSAYLRYQRNADFLYAVDDADECEAAAAPTARGATALGNALMLAATQATAAMDSPVTVSSRSASSSPAPSSVYYSPQQFRVGDLQQSAPATATTTPALRMRQPHNWALYGQRGTHTVSQPSHAGSGSILHSCTAVTPLRCSCRDAAGWAGPNVLTTPRSACCGAPSAGEGWRSPMQWNPRQARDDLEMEAVKHVAQFALAQVAATAAAAAPSTGLSSVSFSPSYATVSWNTVAQEAAVAVSPSHARDGSRAEETRDDSVSQDTVALDGEEAAAEWLELLLHYRDRENESGRIRRALVDASAAAQAPPTEAGGSSNPSAAAAAVTTATTISWWATSSLMREGFPSRDDGSALQQQQQQRRQRHHAGTLPAVSFPSMATTTGAALAPPPAQLCTAMSAHRAARTISRCVRHNVWRMRENERQRLSASVAARVAAR

Target ORF information:

RefSeq Version	XM_003392139.1
Organism	Leishmania infantum JPCM5
Definition	Leishmania infantum JPCM5 hypothetical protein partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_003392139.1

ORF Insert Sequence:

ATGTTGGGTC GCTCCGCGCA CGAAACGATG CGGGCACCGG CGCTAGCCTC CTGGCAGCCG 
CAGGAGCCGC GTGGAACGGA TTCGGCCCTG TCGTTGTCAC CGCAGCAGCG TCCATCGCTG 
TCGCTGAGGT CGCCGCCGAG TACGCCGCAA CAGCGCGACG GTGGACGCCA TCCGTATCCA 
CACCACCATC GTCATCAGTA TCAGCAGCGC GCGAATCAGC AGCAGCAGCG CACGCCTCGC 
GCTGGCGCGG CCGCCCCTCC ACCGTACTCG GATCGCAGTG ATGCTGCGTC TGCCGGCGAG 
TTGGTGTCAC CGCTCATGCG CTCACCGAGG ATGCCCTCGC CGCTTCAGTA TCAGCAGCAG 
CATCACAGGC GATATCGCTC CTCTCTGCCG GCACCGCCGC CGCTGCGCAG CCTGACGCTC 
TCGTCAGACC GCGTATCTCT GCGACTCGCA CGCGCACATG CGTCGCACCA CCAGCAGCGT 
ACCCATCACG TTGACCAGAG CGATAGCCCC GCCACGCGTC ACGCTCCCCC GCTGTCGATC 
GCCGCCTTGG AAGAGCACGA CTCAGCGAGT GCCACGGCCC GGCAAGGGTC TCGTGCCCAT 
AATCGGCGAC ACACACGCGG TCGCAGCAAC GTGCAACTGC ACCTCTCAGC GCCGGTGCTG 
AGCAACAACC AAGCGGAAGA CAAGGCGCAC CTGTCCACGC CGGTGGATCA GCGCATCCCG 
GCCATGGTGC CACCGTCGTA TGATGTGTAC AACCTCGACA TGCCTGGCGC TGGTATGCGT 
GAAGCAGCAG CAGGAGCGAC GCGTGGTGCC TACGCGTCGT CATCGCTCAC CTCACAGGCG 
TACCAGCTCA AAACTGCGCA GCCGCAGCCG CAGCTCCTGC ACACGCTGAA GCTGGTGGAC 
GGTGTGTGGC GAGTCGTCGT ACCTCCGCAG CAGCAGCCAC CGACATCCGG GCCACAACTG 
CAGCGTGGCA CGGCCGCCCA CCAGCGCCAT GGCAACCCCG CATGCCACTC GCCCAGGAAT 
CACAGCTGCG ACTGGTGCGG TGGTTTGGAC AACAGCGAGG CGGCGTCGGC CACGGAGGCC 
GCCTCGCCGA CAAGGTGTCA CGGCGCCAAG AGCCCAACAT ACAGGATTCC GACAGCGACC 
ACCTTCACCG CCGCCGGCAC GCCGTGCGGC CTGTCTATGT CGGCGTGCGG TGGTGACTGG 
AGGTCGCCGT GCCTCGCGGC GGCGAATATG TGGTGTCACC ACCAGCACTA TCCGCTGCAG 
TGCCACGCTC GCACCACGCC TGCGTCCGTC GCGATGCGCA GCAGCAGTGT CGGCCTGTCC 
GACGGCGTTG ACACGGCTCT TTCTCCCGCC TCCACCCCTG CGCGTGCGCC GCGTACGCCA 
CGGCGACAGC AGCAGCAACC TCACCTACCG CACGGTCGGT ATGGCGCTCA CCACCACTGC 
GGCGTCCACT CGCCATCGGC CCCTTCCTTC GCTTCCGAAG AGGCGTACGC CACGTGCGGG 
CAGTGCAACA CGCCACACGA GGCCGATCTG GCAGCCGGCA CGCCGTCGTC GGCGGTTCCC 
CGCGCCGCTG CCTCGGTGGC CGGGCGGGGC TACCAGCAAG CGCTGATGAC ACCAACAATC 
GTGATTGCCA GGGCGACACC GGCGACCGCC CGCGACGCGC TCACCGCCAC CACGGTGACA 
GACGCTCGAT GGGGCTTTAC CAACTCTGCC GCCGCCTCCA CATCCGTCGG GTCAACGCTG 
CAGCACGACA ACGCGCGCAC GACGCTGCCA TCAATCGCCT CTGTCTCTGC TGCTACGGCC 
ACAGCCGATG GAGGCCGCGG CGGCGCAGTG GCGGTCCATG ACGACGACGA CGACGACGAC 
GCGGCACTGC TGTACGCCTC CTCCTCGGCC TACCTGCGTT ATCAACGTAA TGCAGACTTT 
CTCTACGCCG TCGACGACGC CGACGAGTGC GAGGCCGCCG CGGCGCCGAC GGCCAGAGGT 
GCCACAGCGT TGGGCAATGC GCTCATGCTC GCAGCCACGC AAGCCACCGC GGCCATGGAC 
TCGCCAGTTA CGGTGTCCTC CCGCTCGGCC TCCTCCTCCC CAGCGCCGTC TTCTGTGTAC 
TACAGTCCGC AGCAGTTTCG CGTCGGCGAC CTGCAGCAGA GCGCACCGGC GACAGCAACG 
ACGACGCCGG CGCTTCGCAT GCGTCAGCCA CACAACTGGG CGCTATACGG CCAACGTGGC 
ACACACACGG TTTCGCAACC TTCTCACGCT GGCAGCGGCA GCATTCTCCA CAGCTGCACA 
GCCGTGACCC CGCTGCGGTG CTCGTGCCGC GACGCGGCTG GGTGGGCCGG CCCCAACGTT 
CTGACGACCC CACGAAGCGC CTGCTGCGGT GCCCCCAGCG CAGGAGAGGG ATGGCGGTCC 
CCGATGCAGT GGAACCCGCG CCAGGCTCGT GACGACCTCG AGATGGAGGC CGTGAAGCAC 
GTCGCGCAGT TTGCCTTGGC ACAGGTGGCC GCCACAGCAG CAGCAGCGGC ACCGTCAACC 
GGCTTGTCTT CGGTCTCGTT CTCTCCCTCG TACGCCACGG TATCTTGGAA CACTGTGGCG 
CAGGAGGCGG CGGTTGCCGT TTCGCCGTCG CACGCGCGGG ATGGGAGCCG AGCGGAAGAG 
ACGCGCGATG ACTCAGTGAG TCAGGACACC GTCGCCCTTG ACGGAGAGGA GGCGGCGGCG 
GAGTGGCTGG AGCTGCTTCT ACACTATCGT GACCGAGAAA ACGAAAGTGG ACGCATTCGC 
CGCGCTCTCG TTGATGCCTC AGCGGCCGCG CAGGCACCAC CAACAGAGGC CGGGGGTAGC 
AGCAACCCCA GCGCTGCCGC GGCTGCCGTG ACGACGGCAA CGACGATCTC GTGGTGGGCC 
ACCTCGTCCC TTATGCGTGA AGGGTTTCCG TCTCGCGATG ATGGAAGTGC GCTACAGCAG 
CAGCAGCAAC AGAGGCGGCA GCGGCATCAC GCTGGAACTC TGCCCGCTGT ATCTTTTCCA 
TCGATGGCAA CAACAACAGG AGCAGCGTTG GCGCCACCAC CGGCGCAGCT GTGTACCGCC 
ATGAGTGCAC ACAGGGCAGC TCGCACAATA TCGCGGTGTG TGCGCCATAA CGTGTGGCGC 
ATGCGCGAGA ACGAGCGCCA GCGCCTCTCT GCCTCCGTCG CCGCACGCGT CGCAGCGCGG 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Genome research21(12)2129-42(2011 Dec)
Rogers MB,Hilley JD,Dickens NJ,Wilkes J,Bates PA,Depledge DP,Harris D,Her Y,Herzyk P,Imamura H,Otto TD,Sanders M,Seeger K,Dujardin JC,Berriman M,Smith DF,Hertz-Fowler C,Mottram JC

Comparative genomic analysis of three Leishmania species that cause diverse human disease.
Nature genetics39(7)839-47(2007 Jul)
Peacock CS,Seeger K,Harris D,Murphy L,Ruiz JC,Quail MA,Peters N,Adlem E,Tivey A,Aslett M,Kerhornou A,Ivens A,Fraser A,Rajandream MA,Carver T,Norbertczak H,Chillingworth T,Hance Z,Jagels K,Moule S,Ormond D,Rutter S,Squares R,Whitehead S,Rabbinowitsch E,Arrowsmith C,White B,Thurston S,Bringaud F,Baldauf SL,Faulconbridge A,Jeffares D,Depledge DP,Oyola SO,Hilley JD,Brito LO,Tosi LR,Barrell B,Cruz AK,Mottram JC,Smith DF,Berriman M

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LINJ_03_0440 cDNA ORF clone, Leishmania infantum JPCM5

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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