Gene Symbol | UPF3A |
Entrez Gene ID | 101959601 |
Full Name | UPF3A, regulator of nonsense mediated mRNA decay |
Gene Type | protein-coding |
Organism | Ictidomys tridecemlineatus(Thirteen-lined ground squirrel) |
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ORF » Species Summary » Ictidomys tridecemlineatus » UPF3A cDNA ORF clone
Gene Symbol | UPF3A |
Entrez Gene ID | 101959601 |
Full Name | UPF3A, regulator of nonsense mediated mRNA decay |
Gene Type | protein-coding |
Organism | Ictidomys tridecemlineatus(Thirteen-lined ground squirrel) |
mRNA | Protein | Name |
---|---|---|
XM_021721407.1 | XP_021577082.1 | regulator of nonsense transcripts 3A isoform X3 |
XM_013366219.1 | XP_013221673.1 | regulator of nonsense transcripts 3A isoform X1 |
XM_021721408.1 | XP_021577083.1 | regulator of nonsense transcripts 3A isoform X4 |
XM_005342346.3 | XP_005342403.3 | regulator of nonsense transcripts 3A isoform X2 |
XM_013366219.2 | XP_013221673.2 | regulator of nonsense transcripts 3A isoform X1 |
XM_005342346.2 | XP_005342403.2 | regulator of nonsense transcripts 3A isoform X2 |
The following UPF3A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the UPF3A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OIc73054 | |
Clone ID Related Accession (Same CDS sequence) | XM_013366219.1 | |
Accession Version | XM_013366219.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1311bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1439222400000 | |
Organism | Ictidomys tridecemlineatus(Thirteen-lined ground squirrel) | |
Product | regulator of nonsense transcripts 3A isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004937030.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictidomys tridecemlineatus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGCTCCG AGAAGGAGCG GGCCGGAGGC CCGGGCGCGA CCGTTGGTAC CCGGGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013221673.1 |
CDS | 35..1345 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGCTCCG AGAAGGAGCG GGCCGGAGGC CCGGGCGCGA CCGTTGGTAC CCGGGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OIc73055 | |
Clone ID Related Accession (Same CDS sequence) | XM_005342346.2 | |
Accession Version | XM_005342346.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1308bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1439222400000 | |
Organism | Ictidomys tridecemlineatus(Thirteen-lined ground squirrel) | |
Product | regulator of nonsense transcripts 3A isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004937030.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 12, 2015 this sequence version replaced XM_005342346.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictidomys tridecemlineatus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGCTCCG AGAAGGAGCG GGCCGGAGGC CCGGGCGCGA CCGTTGGTAC CCGGGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005342403.2 |
CDS | 35..1342 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGCTCCG AGAAGGAGCG GGCCGGAGGC CCGGGCGCGA CCGTTGGTAC CCGGGGCCCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OIc86009 | |
Clone ID Related Accession (Same CDS sequence) | XM_013366219.2 | |
Accession Version | XM_013366219.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1395bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1498924800000 | |
Organism | Ictidomys tridecemlineatus(thirteen-lined ground squirrel) | |
Product | regulator of nonsense transcripts 3A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004937030.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 3, 2017 this sequence version replaced XM_013366219.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictidomys tridecemlineatus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGGGG GCGGGGCAGT GGCGGCCGAC GTCTCGCGAG GTTTCATCCT CGCGCAGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_013221673.2 |
CDS | 150..1544 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCGGGG GCGGGGCAGT GGCGGCCGAC GTCTCGCGAG GTTTCATCCT CGCGCAGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OIc86010 | |
Clone ID Related Accession (Same CDS sequence) | XM_005342346.3 | |
Accession Version | XM_005342346.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1392bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1498924800000 | |
Organism | Ictidomys tridecemlineatus(thirteen-lined ground squirrel) | |
Product | regulator of nonsense transcripts 3A isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004937030.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 3, 2017 this sequence version replaced XM_005342346.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictidomys tridecemlineatus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGGGG GCGGGGCAGT GGCGGCCGAC GTCTCGCGAG GTTTCATCCT CGCGCAGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005342403.3 |
CDS | 150..1541 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCGGGG GCGGGGCAGT GGCGGCCGAC GTCTCGCGAG GTTTCATCCT CGCGCAGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OIc86011 | |
Clone ID Related Accession (Same CDS sequence) | XM_021721407.1 | |
Accession Version | XM_021721407.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1311bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1498924800000 | |
Organism | Ictidomys tridecemlineatus(thirteen-lined ground squirrel) | |
Product | regulator of nonsense transcripts 3A isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004937030.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictidomys tridecemlineatus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGGGG GCGGGGCAGT GGCGGCCGAC GTCTCGCGAG GTTTCATCCT CGCGCAGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021577082.1 |
CDS | 150..1460 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCGGGG GCGGGGCAGT GGCGGCCGAC GTCTCGCGAG GTTTCATCCT CGCGCAGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OIc86012 | |
Clone ID Related Accession (Same CDS sequence) | XM_021721408.1 | |
Accession Version | XM_021721408.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1224bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1498924800000 | |
Organism | Ictidomys tridecemlineatus(thirteen-lined ground squirrel) | |
Product | regulator of nonsense transcripts 3A isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004937030.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Ictidomys tridecemlineatus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCGGGG GCGGGGCAGT GGCGGCCGAC GTCTCGCGAG GTTTCATCCT CGCGCAGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021577083.1 |
CDS | 1091..2314 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCGGGG GCGGGGCAGT GGCGGCCGAC GTCTCGCGAG GTTTCATCCT CGCGCAGGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.