LOC100206998 cDNA ORF clone, Hydra vulgaris

The following LOC100206998 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100206998 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OHc16078 XM_012704288.1
Latest version!
Hydra vulgaris uncharacterized LOC100206998 (LOC100206998), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $727.30
$1039.00
OHc16079 XM_012704289.1
Latest version!
Hydra vulgaris uncharacterized LOC100206998 (LOC100206998), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $727.30
$1039.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OHc16078
    Clone ID Related Accession (Same CDS sequence) XM_012704288.1
    Accession Version XM_012704288.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4203bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1433606400000
    Organism Hydra vulgaris
    Product uncharacterized protein LOC100206998 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004169461.1) and transcript sequence (GAOL01020637.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Hydra vulgaris Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 515 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    ATGGCATGGA CAGCCATTTT GGCTCTTTGT TTATTTTCCT TGTATTTTGA AAATGTTGAA 
    TGCAACTTTA CATCTGGTGC TAATAACAAT GTTAAGCAGT CATCTTCATC AACTAAAGGT
    GTGGCAAAGG ATATCTTAAC TGATTTAGCT TCAGCTGCTA TTTGTAAAGG TTTATACGTA
    GGCAGTCAGT TTTGCTGGTT ATTTCATGAA ATTGTAAATC AAAACAAGGT TATTGATCCT
    GTGAGCAAAA GAGAAGCAAC TTTGTACAAT GGTGCTACTA TTGGATCATC AATTGATCAT
    CCTCACTATT TAAGTTTACA AAATGCTAAC GAAGCTGAGT ATCCATATGT AGATATGGGA
    GATTTTGCAG GAACATGTGT TTCTGATCCC AATTTGTGCA CCAATGGTTT AACTGTAATG
    TTTTGGTTAA AAATGACTCA AGATGATATT TCAAGAATGT TTGAAGCAAG CTATACTCAT
    CAATATATTA TATCAAGTGG CGGCCAAAAA AGTGATTCAA GGGGGTTTGC TTTTCTGTAC
    CAACAAGATT CAAATTTTAA TGGATTCAAA CTTCAACTTC AAGCAAGTGA TAGTGATTAT
    GTGATTGAGA TGAATAGCAT TCCTAATGAA TGGTTTCATG TTGCATTTAC TTGGCATAAA
    GAAGGGGAAA TTTTATTGCC TGGGACTCGT GCTGGATTGA TTTACTATCA GAATGGAATT
    CAGGTAGGAC CATTAGGTAC AGCTGTTGCA GGAAGTTATC CTTTTGATAA GCAGACTCGA
    CTTACAATTG GTAAACCAAA CTATGGAGAT AAATTTTATG GGAGATTTTT GATGGATAGC
    TTCATTATAT ATTATCAAGT TCATCCTGTC AATGCTATTC TGAAATTTGC TACAAGTGCA
    TCAATCAGTG TGACAGAAAG TTTGTCAGGA AGCATATCAG GGAGTGTATC AGGAAGTGTA
    ACTGGAGTAA TCAATGGAAA TGGAGATGCA AGCTTATCTT TGACATATCA AACAAGTGTA
    AAAATGTATG AATATGCACG ATGGTTTTGG CCATTTAAAT CAGTACGAAT TTCTGATGCT
    GGACAATCGA TATCTCCACT TCAACAGAGT GATTCAAATC ATTATGCAGT TTTAGGGGGA
    GGAGCAAAAT TGTATCTTAG TTCAGTGAGA GGACAAGTTT TGTGGTTAGA GAATTTCGGG
    GCTTTTGCAG TATTGGGAGA TTTTGCTGGT ACTTGTGTTA GTGATCCAGA AAAATGTAGT
    CAACAAGCTG GAAGTGCCCC ACTTGGTATG ACCCCAGGAT TAACAGTATC ATTTTGGCTT
    AAAATTACAG CATCTGATCT TGCAGTTCCA TTAAATGACC AGCAGCAACA ACATCAGTAC
    ATCATTTCTA GTGGGGGGCA AGTGAGCAAC TCGAGGGGTT TTTCATTTTT GTATGCAGCA
    GAGGAACAAA AATTTAAACT TCAGTTGCAA ACAAGATATT ATGTATACAT GATTGAGTTT
    AGCAATTTAC AAGAAACATG GTGTCATATT GCTTTTACAT GGAAAAAAGA AGGTCAGCTT
    GTGCTTTACA TAAATGGAGT AATAAAAGAT GCGAGAGAAA AGCAAGAAAA AACATTTGAG
    TTAGATACAC ACACTAAATT GACAGTTGGT AAGCCAAATC ACATTGATAA ACATTTTGGA
    AGATTCAAAA TGGATTTGCT TAGTATCTTT TATTATCAAT TATCATCAAC ACAAATTGGT
    GAAATTGTGA ACAATGCAGC TACAAATTTA CTGCATTCAC TTAATACATA TCTATTGCAA
    CCAATGAAGG CACCGTCTTT GCATTCACTT AATGCACCCA CATTACTAAG TTTCCACAAC
    TTTTATACTA ATCCTTTTCC TACTTTTGTT ACTAAAGTAA CCGGACCATT TGCCACAGTA
    TCCCCATCTC TTATTGATAG TGGAGAAATT AATCCAACTG TTCCTCGTGG TACTACTATT
    AAACCTGCTT CTCAGCCACC AACACCAACT TCTCCTACAG GCAAAACAAG TGCAATTTGT
    ACAGCAAAGC TTGATCTTGT GTTGCTCATC GACAATTCAG GTTCTATTGA AGCACGAGGT
    CGTGAAGGTT ATTTTGAACA AATTAAAATG TTTATCAAAA ATTTAATGAA GCTTTTCAGA
    GTAGGTACAG ATGCTAATGT TGCTATTATT GAAGCTTCAT CAGATGCTAG AATAATTGCT
    AAATTTGGAG ATGTCAAAGA TAAAGTTGTG TTTGACCAAT ATATAAACAA TCTTAATTAT
    AAGAAAGAGC GATCTTTTAT TGGTAAAGCA TTGGAATTAG CAAGAACTGA TGTATTTTCT
    AGAATTCTCT GTAAACAAAG TGCTAAGTTA ATGATGGTGA TAAGTGATGG TTATGCTTCA
    GATGATGTTA CATTGTCAGG TGTTGAACTG CGAGACTTAG GAGTAATTAT GATGGGCATT
    GGGTATGGCC CTGAAACACA ACTAATGCGG TATACTCTTG AAAGTTTGTC TTCTGATCCT
    AAAGATCAAT ACACCTTTGT GTTTGGTTAT GACCGACTTA TTGAATCAGT ACAACTTATT
    GTCAAAAAAG CATGTGAAGC TGCAACAGAG GCTTCATTAG TTGATACCAC TGATCAAGTT
    AACAATAACC CAATTAAAGG CGCTGTTGGT CAGGAGTTTA TTAATTACTT TATGACAGAA
    ATTAATAAAT ATCGCCGTAT GCATAGTGCA ATACCATTAA CTTGGTCTGT TGAACTTAGC
    ATGAAGGCTC AACAGTGGGC TGAGTATCTT GCTAATGAGG ACAAACTTCT AACAAAACCA
    AAAGTTCACT ATGGTCAAAC TTTATATATT TCTCCAAAGC CTGGCCCGAT ATCTGCACAG
    ATTGCTGTCC GTGCATGGTA CAATCAAATA ATCTATTATG ATTTTCAAAA GCCAAGAATA
    AGTGAACTAA ATAGTTATTT TGTGCAGTTG GTTTGGCGCT CAGCAACCGA TGTGGGGGTT
    GGAAAGTATC AGTCAGCATC AGGAAAAACA TATGTTGTTG CATTTTATAA TCCAATTGGA
    AATAGTGATG ATGGATTGAG TTTTAATATT CTTGCCATGA CTAGTTCAGC AGTGACTGGT
    GTCAAATCAG GATATTGTCC TACTGGATAC CAACCGAATT TAGAGTACTG CTATAAGCTA
    TATTCTGAAC CAGTGACATG GGAAGAGGCT GTAGCAACTT GCAGCGCTCA AAAGGGTGCG
    CTAACATCTA TTACAAAAGA TGAAGAACAT TATTTTATAT TTAATATTTT ACATGCGCAT
    ACAGTTAAGT CTACCTGGCT TGGATTGAAT GACAGGATGT TAGAAGGGTC GTTTACATGG
    GTGGATGGTG CTCCACTTTC TTTTAATGGT TGGACTAATC CACCAATAAT TGGAAATCAG
    AAAAGTTGCG TGCAACTTAC AACTGATGTA GGATGGCAAA CTGAACAGTG TGATATACAA
    AATCCATTTA TTTGTAAAAC AATACGACCA GGAGACCTCA TTTTTATGGT AACAATACAT
    TATCCAACAC AAGCATGGAG CCAAGATCTT GTGTATGGAA CTACACCAGC AGCTATTGAA
    CTTATTCAAC GTGTTGAAAG ACTTATCATG AGTATATATG GCTCTCGAGA GTGGTTTCTT
    AGTTATACCA TCAAAGCATT TAGGGGTCAT GTCAGTGTTT TTATTGACAT GGAATTACGA
    TTCTCCCCAG CTTCACCAAT TGATCCTGTT GCTCCTTTAA AAAATGTCAC CTATACTGAA
    GATTGCGATG GTTATATTTG TGATTTGACT GATGTCCAGA TTGTTCCAGC AATTAATGTT
    ACATACAATG GAACGTGTTC GGCAAATTGT TACACTAGTT GTACACCAAA CTGCGCTCCA
    GCTTGCTGTT CACCACAAAC TTTACCTACT TACTACACAT ATGAAGTTGT TCAAGTACCA
    GCTGGACAGC AAACTGCAGC ACCACCACCA CCTCCACCAC CACCGCCACC TCCTCCTCCT
    CCACCACCAA TTGTGTCGCC TGTTACTTCC GTTATTGTGA CTTTCCCTTC GTATTGCGCC
    CAACAATGTC AACAGGTGTG TACCCCTGCA TGTCCGCCAG AATGCTGTCA ACAAAAACGT
    CGAAAAAGAA TGGAAATTTT GCACAAAAGA AGTAAAATAA ATCACAACCA CCATCAAGGT
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_012559742.1
    CDS374..4576
    Translation

    Target ORF information:

    RefSeq Version XM_012704288.1
    Organism Hydra vulgaris
    Definition Hydra vulgaris uncharacterized LOC100206998 (LOC100206998), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_012704288.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    4081
    4141
    4201
    ATGGCATGGA CAGCCATTTT GGCTCTTTGT TTATTTTCCT TGTATTTTGA AAATGTTGAA 
    TGCAACTTTA CATCTGGTGC TAATAACAAT GTTAAGCAGT CATCTTCATC AACTAAAGGT
    GTGGCAAAGG ATATCTTAAC TGATTTAGCT TCAGCTGCTA TTTGTAAAGG TTTATACGTA
    GGCAGTCAGT TTTGCTGGTT ATTTCATGAA ATTGTAAATC AAAACAAGGT TATTGATCCT
    GTGAGCAAAA GAGAAGCAAC TTTGTACAAT GGTGCTACTA TTGGATCATC AATTGATCAT
    CCTCACTATT TAAGTTTACA AAATGCTAAC GAAGCTGAGT ATCCATATGT AGATATGGGA
    GATTTTGCAG GAACATGTGT TTCTGATCCC AATTTGTGCA CCAATGGTTT AACTGTAATG
    TTTTGGTTAA AAATGACTCA AGATGATATT TCAAGAATGT TTGAAGCAAG CTATACTCAT
    CAATATATTA TATCAAGTGG CGGCCAAAAA AGTGATTCAA GGGGGTTTGC TTTTCTGTAC
    CAACAAGATT CAAATTTTAA TGGATTCAAA CTTCAACTTC AAGCAAGTGA TAGTGATTAT
    GTGATTGAGA TGAATAGCAT TCCTAATGAA TGGTTTCATG TTGCATTTAC TTGGCATAAA
    GAAGGGGAAA TTTTATTGCC TGGGACTCGT GCTGGATTGA TTTACTATCA GAATGGAATT
    CAGGTAGGAC CATTAGGTAC AGCTGTTGCA GGAAGTTATC CTTTTGATAA GCAGACTCGA
    CTTACAATTG GTAAACCAAA CTATGGAGAT AAATTTTATG GGAGATTTTT GATGGATAGC
    TTCATTATAT ATTATCAAGT TCATCCTGTC AATGCTATTC TGAAATTTGC TACAAGTGCA
    TCAATCAGTG TGACAGAAAG TTTGTCAGGA AGCATATCAG GGAGTGTATC AGGAAGTGTA
    ACTGGAGTAA TCAATGGAAA TGGAGATGCA AGCTTATCTT TGACATATCA AACAAGTGTA
    AAAATGTATG AATATGCACG ATGGTTTTGG CCATTTAAAT CAGTACGAAT TTCTGATGCT
    GGACAATCGA TATCTCCACT TCAACAGAGT GATTCAAATC ATTATGCAGT TTTAGGGGGA
    GGAGCAAAAT TGTATCTTAG TTCAGTGAGA GGACAAGTTT TGTGGTTAGA GAATTTCGGG
    GCTTTTGCAG TATTGGGAGA TTTTGCTGGT ACTTGTGTTA GTGATCCAGA AAAATGTAGT
    CAACAAGCTG GAAGTGCCCC ACTTGGTATG ACCCCAGGAT TAACAGTATC ATTTTGGCTT
    AAAATTACAG CATCTGATCT TGCAGTTCCA TTAAATGACC AGCAGCAACA ACATCAGTAC
    ATCATTTCTA GTGGGGGGCA AGTGAGCAAC TCGAGGGGTT TTTCATTTTT GTATGCAGCA
    GAGGAACAAA AATTTAAACT TCAGTTGCAA ACAAGATATT ATGTATACAT GATTGAGTTT
    AGCAATTTAC AAGAAACATG GTGTCATATT GCTTTTACAT GGAAAAAAGA AGGTCAGCTT
    GTGCTTTACA TAAATGGAGT AATAAAAGAT GCGAGAGAAA AGCAAGAAAA AACATTTGAG
    TTAGATACAC ACACTAAATT GACAGTTGGT AAGCCAAATC ACATTGATAA ACATTTTGGA
    AGATTCAAAA TGGATTTGCT TAGTATCTTT TATTATCAAT TATCATCAAC ACAAATTGGT
    GAAATTGTGA ACAATGCAGC TACAAATTTA CTGCATTCAC TTAATACATA TCTATTGCAA
    CCAATGAAGG CACCGTCTTT GCATTCACTT AATGCACCCA CATTACTAAG TTTCCACAAC
    TTTTATACTA ATCCTTTTCC TACTTTTGTT ACTAAAGTAA CCGGACCATT TGCCACAGTA
    TCCCCATCTC TTATTGATAG TGGAGAAATT AATCCAACTG TTCCTCGTGG TACTACTATT
    AAACCTGCTT CTCAGCCACC AACACCAACT TCTCCTACAG GCAAAACAAG TGCAATTTGT
    ACAGCAAAGC TTGATCTTGT GTTGCTCATC GACAATTCAG GTTCTATTGA AGCACGAGGT
    CGTGAAGGTT ATTTTGAACA AATTAAAATG TTTATCAAAA ATTTAATGAA GCTTTTCAGA
    GTAGGTACAG ATGCTAATGT TGCTATTATT GAAGCTTCAT CAGATGCTAG AATAATTGCT
    AAATTTGGAG ATGTCAAAGA TAAAGTTGTG TTTGACCAAT ATATAAACAA TCTTAATTAT
    AAGAAAGAGC GATCTTTTAT TGGTAAAGCA TTGGAATTAG CAAGAACTGA TGTATTTTCT
    AGAATTCTCT GTAAACAAAG TGCTAAGTTA ATGATGGTGA TAAGTGATGG TTATGCTTCA
    GATGATGTTA CATTGTCAGG TGTTGAACTG CGAGACTTAG GAGTAATTAT GATGGGCATT
    GGGTATGGCC CTGAAACACA ACTAATGCGG TATACTCTTG AAAGTTTGTC TTCTGATCCT
    AAAGATCAAT ACACCTTTGT GTTTGGTTAT GACCGACTTA TTGAATCAGT ACAACTTATT
    GTCAAAAAAG CATGTGAAGC TGCAACAGAG GCTTCATTAG TTGATACCAC TGATCAAGTT
    AACAATAACC CAATTAAAGG CGCTGTTGGT CAGGAGTTTA TTAATTACTT TATGACAGAA
    ATTAATAAAT ATCGCCGTAT GCATAGTGCA ATACCATTAA CTTGGTCTGT TGAACTTAGC
    ATGAAGGCTC AACAGTGGGC TGAGTATCTT GCTAATGAGG ACAAACTTCT AACAAAACCA
    AAAGTTCACT ATGGTCAAAC TTTATATATT TCTCCAAAGC CTGGCCCGAT ATCTGCACAG
    ATTGCTGTCC GTGCATGGTA CAATCAAATA ATCTATTATG ATTTTCAAAA GCCAAGAATA
    AGTGAACTAA ATAGTTATTT TGTGCAGTTG GTTTGGCGCT CAGCAACCGA TGTGGGGGTT
    GGAAAGTATC AGTCAGCATC AGGAAAAACA TATGTTGTTG CATTTTATAA TCCAATTGGA
    AATAGTGATG ATGGATTGAG TTTTAATATT CTTGCCATGA CTAGTTCAGC AGTGACTGGT
    GTCAAATCAG GATATTGTCC TACTGGATAC CAACCGAATT TAGAGTACTG CTATAAGCTA
    TATTCTGAAC CAGTGACATG GGAAGAGGCT GTAGCAACTT GCAGCGCTCA AAAGGGTGCG
    CTAACATCTA TTACAAAAGA TGAAGAACAT TATTTTATAT TTAATATTTT ACATGCGCAT
    ACAGTTAAGT CTACCTGGCT TGGATTGAAT GACAGGATGT TAGAAGGGTC GTTTACATGG
    GTGGATGGTG CTCCACTTTC TTTTAATGGT TGGACTAATC CACCAATAAT TGGAAATCAG
    AAAAGTTGCG TGCAACTTAC AACTGATGTA GGATGGCAAA CTGAACAGTG TGATATACAA
    AATCCATTTA TTTGTAAAAC AATACGACCA GGAGACCTCA TTTTTATGGT AACAATACAT
    TATCCAACAC AAGCATGGAG CCAAGATCTT GTGTATGGAA CTACACCAGC AGCTATTGAA
    CTTATTCAAC GTGTTGAAAG ACTTATCATG AGTATATATG GCTCTCGAGA GTGGTTTCTT
    AGTTATACCA TCAAAGCATT TAGGGGTCAT GTCAGTGTTT TTATTGACAT GGAATTACGA
    TTCTCCCCAG CTTCACCAAT TGATCCTGTT GCTCCTTTAA AAAATGTCAC CTATACTGAA
    GATTGCGATG GTTATATTTG TGATTTGACT GATGTCCAGA TTGTTCCAGC AATTAATGTT
    ACATACAATG GAACGTGTTC GGCAAATTGT TACACTAGTT GTACACCAAA CTGCGCTCCA
    GCTTGCTGTT CACCACAAAC TTTACCTACT TACTACACAT ATGAAGTTGT TCAAGTACCA
    GCTGGACAGC AAACTGCAGC ACCACCACCA CCTCCACCAC CACCGCCACC TCCTCCTCCT
    CCACCACCAA TTGTGTCGCC TGTTACTTCC GTTATTGTGA CTTTCCCTTC GTATTGCGCC
    CAACAATGTC AACAGGTGTG TACCCCTGCA TGTCCGCCAG AATGCTGTCA ACAAAAACGT
    CGAAAAAGAA TGGAAATTTT GCACAAAAGA AGTAAAATAA ATCACAACCA CCATCAAGGT
    TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OHc16079
    Clone ID Related Accession (Same CDS sequence) XM_012704289.1
    Accession Version XM_012704289.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 4071bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1433606400000
    Organism Hydra vulgaris
    Product uncharacterized protein LOC100206998 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004169461.1) and transcript sequence (GAOL01020637.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Hydra vulgaris Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 515 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    ATGGCATGGA CAGCCATTTT GGCTCTTTGT TTATTTTCCT TGTATTTTGA AAATGTTGAA 
    TGCAACTTTA CATCTGGTGC TAATAACAAT GTTAAGCAGT CATCTTCATC AACTAAAGGT
    GTGGCAAAGG ATATCTTAAC TGATTTAGCT TCAGCTGCTA TTTGTAAAGG TTTATACGTA
    GGCAGTCAGT TTTGCTGGTT ATTTCATGAA ATTGTAAATC AAAACAAGGT TATTGATCCT
    GTGAGCAAAA GAGAAGCAAC TTTGTACAAT GGTGCTACTA TTGGATCATC AATTGATCAT
    CCTCACTATT TAAGTTTACA AAATGCTAAC GAAGCTGAGT ATCCATATGT AGATATGGGA
    GATTTTGCAG GAACATGTGT TTCTGATCCC AATTTGTGCA CCAATGGTTT AACTGTAATG
    TTTTGGTTAA AAATGACTCA AGATGATATT TCAAGAATGT TTGAAGCAAG CTATACTCAT
    CAATATATTA TATCAAGTGG CGGCCAAAAA AGTGATTCAA GGGGGTTTGC TTTTCTGTAC
    CAACAAGATT CAAATTTTAA TGGATTCAAA CTTCAACTTC AAGCAAGTGA TAGTGATTAT
    GTGATTGAGA TGAATAGCAT TCCTAATGAA TGGTTTCATG TTGCATTTAC TTGGCATAAA
    GAAGGGGAAA TTTTATTGCC TGGGACTCGT GCTGGATTGA TTTACTATCA GAATGGAATT
    CAGGTAGGAC CATTAGGTAC AGCTGTTGCA GGAAGTTATC CTTTTGATAA GCAGACTCGA
    CTTACAATTG GTAAACCAAA CTATGGAGAT AAATTTTATG GGAGATTTTT GATGGATAGC
    TTCATTATAT ATTATCAAGT TCATCCTGTC AATGCTATTC TGAAATTTGC TACAAGTGCA
    TCAATCAGTG TGACAGAAAG TTTGTCAGGA AGCATATCAG GGAGTGTATC AGGAAGTGTA
    ACTGGAGTAA TCAATGGAAA TGGAGATGCA AGCTTATCTT TGACATATCA AACAAGTGTA
    AAAATGTATG AATATGCACG ATGGTTTTGG CCATTTAAAT CAGTACGAAT TTCTGATGCT
    GGACAATCGA TATCTCCACT TCAACAGAGT GATTCAAATC ATTATGCAGT TTTAGGGGGA
    GGAGCAAAAT TGTATCTTAG TTCAGTGAGA GGACAAGTTT TGTGGTTAGA GAATTTCGGG
    GCTTTTGCAG TATTGGGAGA TTTTGCTGGT ACTTGTGTTA GTGATCCAGA AAAATGTAGT
    CAACAAGCTG GAAGTGCCCC ACTTGGTATG ACCCCAGGAT TAACAGTATC ATTTTGGCTT
    AAAATTACAG CATCTGATCT TGCAGTTCCA TTAAATGACC AGCAGCAACA ACATCAGTAC
    ATCATTTCTA GTGGGGGGCA AGTGAGCAAC TCGAGGGGTT TTTCATTTTT GTATGCAGCA
    GAGGAACAAA AATTTAAACT TCAGTTGCAA ACAAGATATT ATGTATACAT GATTGAGTTT
    AGCAATTTAC AAGAAACATG GTGTCATATT GCTTTTACAT GGAAAAAAGA AGGTCAGCTT
    GTGCTTTACA TAAATGGAGT AATAAAAGAT GCGAGAGAAA AGCAAGAAAA AACATTTGAG
    TTAGATACAC ACACTAAATT GACAGTTGGT AAGCCAAATC ACATTGATAA ACATTTTGGA
    AGATTCAAAA TGGATTTGCT TAGTATCTTT TATTATCAAT TATCATCAAC ACAAATTGGT
    GAAATTGTGA ACAATGCAGC TACAATAACC GGACCATTTG CCACAGTATC CCCATCTCTT
    ATTGATAGTG GAGAAATTAA TCCAACTGTT CCTCGTGGTA CTACTATTAA ACCTGCTTCT
    CAGCCACCAA CACCAACTTC TCCTACAGGC AAAACAAGTG CAATTTGTAC AGCAAAGCTT
    GATCTTGTGT TGCTCATCGA CAATTCAGGT TCTATTGAAG CACGAGGTCG TGAAGGTTAT
    TTTGAACAAA TTAAAATGTT TATCAAAAAT TTAATGAAGC TTTTCAGAGT AGGTACAGAT
    GCTAATGTTG CTATTATTGA AGCTTCATCA GATGCTAGAA TAATTGCTAA ATTTGGAGAT
    GTCAAAGATA AAGTTGTGTT TGACCAATAT ATAAACAATC TTAATTATAA GAAAGAGCGA
    TCTTTTATTG GTAAAGCATT GGAATTAGCA AGAACTGATG TATTTTCTAG AATTCTCTGT
    AAACAAAGTG CTAAGTTAAT GATGGTGATA AGTGATGGTT ATGCTTCAGA TGATGTTACA
    TTGTCAGGTG TTGAACTGCG AGACTTAGGA GTAATTATGA TGGGCATTGG GTATGGCCCT
    GAAACACAAC TAATGCGGTA TACTCTTGAA AGTTTGTCTT CTGATCCTAA AGATCAATAC
    ACCTTTGTGT TTGGTTATGA CCGACTTATT GAATCAGTAC AACTTATTGT CAAAAAAGCA
    TGTGAAGCTG CAACAGAGGC TTCATTAGTT GATACCACTG ATCAAGTTAA CAATAACCCA
    ATTAAAGGCG CTGTTGGTCA GGAGTTTATT AATTACTTTA TGACAGAAAT TAATAAATAT
    CGCCGTATGC ATAGTGCAAT ACCATTAACT TGGTCTGTTG AACTTAGCAT GAAGGCTCAA
    CAGTGGGCTG AGTATCTTGC TAATGAGGAC AAACTTCTAA CAAAACCAAA AGTTCACTAT
    GGTCAAACTT TATATATTTC TCCAAAGCCT GGCCCGATAT CTGCACAGAT TGCTGTCCGT
    GCATGGTACA ATCAAATAAT CTATTATGAT TTTCAAAAGC CAAGAATAAG TGAACTAAAT
    AGTTATTTTG TGCAGTTGGT TTGGCGCTCA GCAACCGATG TGGGGGTTGG AAAGTATCAG
    TCAGCATCAG GAAAAACATA TGTTGTTGCA TTTTATAATC CAATTGGAAA TAGTGATGAT
    GGATTGAGTT TTAATATTCT TGCCATGACT AGTTCAGCAG TGACTGGTGT CAAATCAGGA
    TATTGTCCTA CTGGATACCA ACCGAATTTA GAGTACTGCT ATAAGCTATA TTCTGAACCA
    GTGACATGGG AAGAGGCTGT AGCAACTTGC AGCGCTCAAA AGGGTGCGCT AACATCTATT
    ACAAAAGATG AAGAACATTA TTTTATATTT AATATTTTAC ATGCGCATAC AGTTAAGTCT
    ACCTGGCTTG GATTGAATGA CAGGATGTTA GAAGGGTCGT TTACATGGGT GGATGGTGCT
    CCACTTTCTT TTAATGGTTG GACTAATCCA CCAATAATTG GAAATCAGAA AAGTTGCGTG
    CAACTTACAA CTGATGTAGG ATGGCAAACT GAACAGTGTG ATATACAAAA TCCATTTATT
    TGTAAAACAA TACGACCAGG AGACCTCATT TTTATGGTAA CAATACATTA TCCAACACAA
    GCATGGAGCC AAGATCTTGT GTATGGAACT ACACCAGCAG CTATTGAACT TATTCAACGT
    GTTGAAAGAC TTATCATGAG TATATATGGC TCTCGAGAGT GGTTTCTTAG TTATACCATC
    AAAGCATTTA GGGGTCATGT CAGTGTTTTT ATTGACATGG AATTACGATT CTCCCCAGCT
    TCACCAATTG ATCCTGTTGC TCCTTTAAAA AATGTCACCT ATACTGAAGA TTGCGATGGT
    TATATTTGTG ATTTGACTGA TGTCCAGATT GTTCCAGCAA TTAATGTTAC ATACAATGGA
    ACGTGTTCGG CAAATTGTTA CACTAGTTGT ACACCAAACT GCGCTCCAGC TTGCTGTTCA
    CCACAAACTT TACCTACTTA CTACACATAT GAAGTTGTTC AAGTACCAGC TGGACAGCAA
    ACTGCAGCAC CACCACCACC TCCACCACCA CCGCCACCTC CTCCTCCTCC ACCACCAATT
    GTGTCGCCTG TTACTTCCGT TATTGTGACT TTCCCTTCGT ATTGCGCCCA ACAATGTCAA
    CAGGTGTGTA CCCCTGCATG TCCGCCAGAA TGCTGTCAAC AAAAACGTCG AAAAAGAATG
    GAAATTTTGC ACAAAAGAAG TAAAATAAAT CACAACCACC ATCAAGGTTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_012559743.1
    CDS374..4444
    Translation

    Target ORF information:

    RefSeq Version XM_012704289.1
    Organism Hydra vulgaris
    Definition Hydra vulgaris uncharacterized LOC100206998 (LOC100206998), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_012704289.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    3721
    3781
    3841
    3901
    3961
    4021
    ATGGCATGGA CAGCCATTTT GGCTCTTTGT TTATTTTCCT TGTATTTTGA AAATGTTGAA 
    TGCAACTTTA CATCTGGTGC TAATAACAAT GTTAAGCAGT CATCTTCATC AACTAAAGGT
    GTGGCAAAGG ATATCTTAAC TGATTTAGCT TCAGCTGCTA TTTGTAAAGG TTTATACGTA
    GGCAGTCAGT TTTGCTGGTT ATTTCATGAA ATTGTAAATC AAAACAAGGT TATTGATCCT
    GTGAGCAAAA GAGAAGCAAC TTTGTACAAT GGTGCTACTA TTGGATCATC AATTGATCAT
    CCTCACTATT TAAGTTTACA AAATGCTAAC GAAGCTGAGT ATCCATATGT AGATATGGGA
    GATTTTGCAG GAACATGTGT TTCTGATCCC AATTTGTGCA CCAATGGTTT AACTGTAATG
    TTTTGGTTAA AAATGACTCA AGATGATATT TCAAGAATGT TTGAAGCAAG CTATACTCAT
    CAATATATTA TATCAAGTGG CGGCCAAAAA AGTGATTCAA GGGGGTTTGC TTTTCTGTAC
    CAACAAGATT CAAATTTTAA TGGATTCAAA CTTCAACTTC AAGCAAGTGA TAGTGATTAT
    GTGATTGAGA TGAATAGCAT TCCTAATGAA TGGTTTCATG TTGCATTTAC TTGGCATAAA
    GAAGGGGAAA TTTTATTGCC TGGGACTCGT GCTGGATTGA TTTACTATCA GAATGGAATT
    CAGGTAGGAC CATTAGGTAC AGCTGTTGCA GGAAGTTATC CTTTTGATAA GCAGACTCGA
    CTTACAATTG GTAAACCAAA CTATGGAGAT AAATTTTATG GGAGATTTTT GATGGATAGC
    TTCATTATAT ATTATCAAGT TCATCCTGTC AATGCTATTC TGAAATTTGC TACAAGTGCA
    TCAATCAGTG TGACAGAAAG TTTGTCAGGA AGCATATCAG GGAGTGTATC AGGAAGTGTA
    ACTGGAGTAA TCAATGGAAA TGGAGATGCA AGCTTATCTT TGACATATCA AACAAGTGTA
    AAAATGTATG AATATGCACG ATGGTTTTGG CCATTTAAAT CAGTACGAAT TTCTGATGCT
    GGACAATCGA TATCTCCACT TCAACAGAGT GATTCAAATC ATTATGCAGT TTTAGGGGGA
    GGAGCAAAAT TGTATCTTAG TTCAGTGAGA GGACAAGTTT TGTGGTTAGA GAATTTCGGG
    GCTTTTGCAG TATTGGGAGA TTTTGCTGGT ACTTGTGTTA GTGATCCAGA AAAATGTAGT
    CAACAAGCTG GAAGTGCCCC ACTTGGTATG ACCCCAGGAT TAACAGTATC ATTTTGGCTT
    AAAATTACAG CATCTGATCT TGCAGTTCCA TTAAATGACC AGCAGCAACA ACATCAGTAC
    ATCATTTCTA GTGGGGGGCA AGTGAGCAAC TCGAGGGGTT TTTCATTTTT GTATGCAGCA
    GAGGAACAAA AATTTAAACT TCAGTTGCAA ACAAGATATT ATGTATACAT GATTGAGTTT
    AGCAATTTAC AAGAAACATG GTGTCATATT GCTTTTACAT GGAAAAAAGA AGGTCAGCTT
    GTGCTTTACA TAAATGGAGT AATAAAAGAT GCGAGAGAAA AGCAAGAAAA AACATTTGAG
    TTAGATACAC ACACTAAATT GACAGTTGGT AAGCCAAATC ACATTGATAA ACATTTTGGA
    AGATTCAAAA TGGATTTGCT TAGTATCTTT TATTATCAAT TATCATCAAC ACAAATTGGT
    GAAATTGTGA ACAATGCAGC TACAATAACC GGACCATTTG CCACAGTATC CCCATCTCTT
    ATTGATAGTG GAGAAATTAA TCCAACTGTT CCTCGTGGTA CTACTATTAA ACCTGCTTCT
    CAGCCACCAA CACCAACTTC TCCTACAGGC AAAACAAGTG CAATTTGTAC AGCAAAGCTT
    GATCTTGTGT TGCTCATCGA CAATTCAGGT TCTATTGAAG CACGAGGTCG TGAAGGTTAT
    TTTGAACAAA TTAAAATGTT TATCAAAAAT TTAATGAAGC TTTTCAGAGT AGGTACAGAT
    GCTAATGTTG CTATTATTGA AGCTTCATCA GATGCTAGAA TAATTGCTAA ATTTGGAGAT
    GTCAAAGATA AAGTTGTGTT TGACCAATAT ATAAACAATC TTAATTATAA GAAAGAGCGA
    TCTTTTATTG GTAAAGCATT GGAATTAGCA AGAACTGATG TATTTTCTAG AATTCTCTGT
    AAACAAAGTG CTAAGTTAAT GATGGTGATA AGTGATGGTT ATGCTTCAGA TGATGTTACA
    TTGTCAGGTG TTGAACTGCG AGACTTAGGA GTAATTATGA TGGGCATTGG GTATGGCCCT
    GAAACACAAC TAATGCGGTA TACTCTTGAA AGTTTGTCTT CTGATCCTAA AGATCAATAC
    ACCTTTGTGT TTGGTTATGA CCGACTTATT GAATCAGTAC AACTTATTGT CAAAAAAGCA
    TGTGAAGCTG CAACAGAGGC TTCATTAGTT GATACCACTG ATCAAGTTAA CAATAACCCA
    ATTAAAGGCG CTGTTGGTCA GGAGTTTATT AATTACTTTA TGACAGAAAT TAATAAATAT
    CGCCGTATGC ATAGTGCAAT ACCATTAACT TGGTCTGTTG AACTTAGCAT GAAGGCTCAA
    CAGTGGGCTG AGTATCTTGC TAATGAGGAC AAACTTCTAA CAAAACCAAA AGTTCACTAT
    GGTCAAACTT TATATATTTC TCCAAAGCCT GGCCCGATAT CTGCACAGAT TGCTGTCCGT
    GCATGGTACA ATCAAATAAT CTATTATGAT TTTCAAAAGC CAAGAATAAG TGAACTAAAT
    AGTTATTTTG TGCAGTTGGT TTGGCGCTCA GCAACCGATG TGGGGGTTGG AAAGTATCAG
    TCAGCATCAG GAAAAACATA TGTTGTTGCA TTTTATAATC CAATTGGAAA TAGTGATGAT
    GGATTGAGTT TTAATATTCT TGCCATGACT AGTTCAGCAG TGACTGGTGT CAAATCAGGA
    TATTGTCCTA CTGGATACCA ACCGAATTTA GAGTACTGCT ATAAGCTATA TTCTGAACCA
    GTGACATGGG AAGAGGCTGT AGCAACTTGC AGCGCTCAAA AGGGTGCGCT AACATCTATT
    ACAAAAGATG AAGAACATTA TTTTATATTT AATATTTTAC ATGCGCATAC AGTTAAGTCT
    ACCTGGCTTG GATTGAATGA CAGGATGTTA GAAGGGTCGT TTACATGGGT GGATGGTGCT
    CCACTTTCTT TTAATGGTTG GACTAATCCA CCAATAATTG GAAATCAGAA AAGTTGCGTG
    CAACTTACAA CTGATGTAGG ATGGCAAACT GAACAGTGTG ATATACAAAA TCCATTTATT
    TGTAAAACAA TACGACCAGG AGACCTCATT TTTATGGTAA CAATACATTA TCCAACACAA
    GCATGGAGCC AAGATCTTGT GTATGGAACT ACACCAGCAG CTATTGAACT TATTCAACGT
    GTTGAAAGAC TTATCATGAG TATATATGGC TCTCGAGAGT GGTTTCTTAG TTATACCATC
    AAAGCATTTA GGGGTCATGT CAGTGTTTTT ATTGACATGG AATTACGATT CTCCCCAGCT
    TCACCAATTG ATCCTGTTGC TCCTTTAAAA AATGTCACCT ATACTGAAGA TTGCGATGGT
    TATATTTGTG ATTTGACTGA TGTCCAGATT GTTCCAGCAA TTAATGTTAC ATACAATGGA
    ACGTGTTCGG CAAATTGTTA CACTAGTTGT ACACCAAACT GCGCTCCAGC TTGCTGTTCA
    CCACAAACTT TACCTACTTA CTACACATAT GAAGTTGTTC AAGTACCAGC TGGACAGCAA
    ACTGCAGCAC CACCACCACC TCCACCACCA CCGCCACCTC CTCCTCCTCC ACCACCAATT
    GTGTCGCCTG TTACTTCCGT TATTGTGACT TTCCCTTCGT ATTGCGCCCA ACAATGTCAA
    CAGGTGTGTA CCCCTGCATG TCCGCCAGAA TGCTGTCAAC AAAAACGTCG AAAAAGAATG
    GAAATTTTGC ACAAAAGAAG TAAAATAAAT CACAACCACC ATCAAGGTTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.