ORF » Species Summary » Drosophila erecta » LOC6548788 cDNA ORF clone

LOC6548788 cDNA ORF clone, Drosophila erecta

The following LOC6548788 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC6548788 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
ODi05813 XM_001974031.3
Latest version!		 Drosophila erecta probable ATP-dependent RNA helicase DDX47 (LOC6548788), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
ODi219755 XM_026980621.1
Latest version!		 Drosophila erecta probable ATP-dependent RNA helicase DDX47 (LOC6548788), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
ODi05813 XM_001974031.2 Drosophila erecta uncharacterized protein (Dere\GG21281), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC6548788 ( XM_001974031.2 ) cDNA ORF clone, Drosophila erecta -> XP_001974067.1 Drosophila erecta uncharacterized protein (Dere\GG21281), mRNA.
    Price & Availability↑
    CloneID ODi05813
    Clone ID Related Accession (Same CDS sequence) XM_001974031.2 , XM_001974031.3
    Accession Version XM_001974031.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1575bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1450540800000
    Organism Drosophila erecta
    Product uncharacterized protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_001956550). On Dec 21, 2015 this sequence version replaced XM_001974031.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 1.04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline URL :: http://flybase.org ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTCGGAAA CTTCAGAGGA CGAACAGACG CAATTGCAAA CCAGTGACGA AGAGGAGGAT 
    CTAAGTGGGG AAGAGGAGCA GGAAGATGGA GAGGAAATTG CAGATAACGA TTATGAAGAA 
    GAGGACGACG AGGCGGCACA AAGTGGCGAA GATGAGCCAT CTAAAGGCTC CGAGCCGGAG 
    GACGACACAG CAGATGATCA GAAGCTAACC TGGAAAGATC TCGGTCTCAA TGAGACTTTG 
    TGTCAAGCAT GTGACGAATT AAAGTGGAAA GCCCCTTCAA AGATTCAGCG GGAGGCTATT 
    CCGGTAGCCC TACAGGGCAA GGATGTGATT GGCCTGGCGG AGACCGGTTC CGGCAAGACA 
    GGAGCCTTCG CTCTACCCAT TTTACACGCC CTTCTCGAGA ATCCGCAGCG GTATTTTGCC 
    CTCGTGCTAA CTCCCACGAG GGAACTGGCC TTTCAAATTG GCGAGCAGTT TGAGGCCCTT 
    GGTAGCGGGA TCGGCATAAA GTGCTGCGTG GTTGTCGGCG GCATGGACAT GGTAGCTCAG 
    GGCCTTCAAT TGGCCAAGAA GCCGCATATT ATTATTGCTA CACCGGGTCG CTTGGTTGAT 
    CACCTAGAAA ACATGAAAGG TTTTAACCTT AAGGCTATTA AATACTTGGT CATGGACGAG 
    GCGGATCGCA TTCTCAACAT GGATTTTGAG GTGGAGCTGG ACAAGATCCT GAAGGTATTG 
    CCACGTGAAC GACGAACATT TCTGTTTAGT GCGACTATGA CCAAGAAGGT AAAGAAACTG 
    CAGCGCGCCT CCCTCAAGGA TCCGGTAAAG GTAGAGGTTT CTAACAAGTA TCAGACGGTT 
    GAGCAGCTGC AGCAATCATA TTTGTTCATC CCTGTTAAAT ACAAGGATGT GTATTTGGTT 
    CATATCCTCA ATGAACTGTC AGGCAACAGT TTCATGATAT TTTGCAGCAC CTGCAATAAC 
    ACAGTTAAGA CAGCATTGAT GCTTCGTGCG TTGGGATTGG CTGCTATTCC GCTGCATGGT 
    CAAATGTCGC AAAACAAGCG ACTGGCTGCC TTAAACAAAT TCAAGGCCAA AAATCGCTCA 
    ATACTCATTT CGACGGACGT GGCCTCCCGC GGCCTGGACA TTCCTCACGT GGATGTCGTC 
    GTAAATTTCG ACATACCAAC GCACAGCAAA GACTACATCC ATCGCGTAGG AAGAACAGCA 
    AGAGCGGGTC GCTCCGGCAA AGCCATCACC CTCGTGAGCC AGTACGACAT TGAATTGTAT 
    CAGCGCATCG AACATCTGTT GGGGAAGCAA CTACCACTGT ATAAGTGCGA GGAGGATGAG 
    GTGATGGCCC TTCAAGAGCG AGTCGCCGAG GCGCAGCGCA CCGCAAAACT GGAGCTGAAG 
    GATCTGGAAG ATACAAAGGG TGGCAAGGGC CACAAGAGAG GCGGGGACAC CCTTGATGAT 
    GATTCGGAGA ACTTCACGGG CGCACGCAAG CGCATGAAAC CGATGGGCGC CGTTGGTGGT 
    GGACACAAGC CTGGGGGAGG TGGAAGAAAG AGCTTTGGCA AAAAGAACTG GAGCAAGGGC 
    AAGCAAAAGA GATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_001974067.1
    CDS85..1659
    Translation

    Target ORF information:

    RefSeq Version XM_001974031.2
    Organism Drosophila erecta
    Definition Drosophila erecta uncharacterized protein (Dere\GG21281), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_001974031.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTCGGAAA CTTCAGAGGA CGAACAGACG CAATTGCAAA CCAGTGACGA AGAGGAGGAT 
    CTAAGTGGGG AAGAGGAGCA GGAAGATGGA GAGGAAATTG CAGATAACGA TTATGAAGAA 
    GAGGACGACG AGGCGGCACA AAGTGGCGAA GATGAGCCAT CTAAAGGCTC CGAGCCGGAG 
    GACGACACAG CAGATGATCA GAAGCTAACC TGGAAAGATC TCGGTCTCAA TGAGACTTTG 
    TGTCAAGCAT GTGACGAATT AAAGTGGAAA GCCCCTTCAA AGATTCAGCG GGAGGCTATT 
    CCGGTAGCCC TACAGGGCAA GGATGTGATT GGCCTGGCGG AGACCGGTTC CGGCAAGACA 
    GGAGCCTTCG CTCTACCCAT TTTACACGCC CTTCTCGAGA ATCCGCAGCG GTATTTTGCC 
    CTCGTGCTAA CTCCCACGAG GGAACTGGCC TTTCAAATTG GCGAGCAGTT TGAGGCCCTT 
    GGTAGCGGGA TCGGCATAAA GTGCTGCGTG GTTGTCGGCG GCATGGACAT GGTAGCTCAG 
    GGCCTTCAAT TGGCCAAGAA GCCGCATATT ATTATTGCTA CACCGGGTCG CTTGGTTGAT 
    CACCTAGAAA ACATGAAAGG TTTTAACCTT AAGGCTATTA AATACTTGGT CATGGACGAG 
    GCGGATCGCA TTCTCAACAT GGATTTTGAG GTGGAGCTGG ACAAGATCCT GAAGGTATTG 
    CCACGTGAAC GACGAACATT TCTGTTTAGT GCGACTATGA CCAAGAAGGT AAAGAAACTG 
    CAGCGCGCCT CCCTCAAGGA TCCGGTAAAG GTAGAGGTTT CTAACAAGTA TCAGACGGTT 
    GAGCAGCTGC AGCAATCATA TTTGTTCATC CCTGTTAAAT ACAAGGATGT GTATTTGGTT 
    CATATCCTCA ATGAACTGTC AGGCAACAGT TTCATGATAT TTTGCAGCAC CTGCAATAAC 
    ACAGTTAAGA CAGCATTGAT GCTTCGTGCG TTGGGATTGG CTGCTATTCC GCTGCATGGT 
    CAAATGTCGC AAAACAAGCG ACTGGCTGCC TTAAACAAAT TCAAGGCCAA AAATCGCTCA 
    ATACTCATTT CGACGGACGT GGCCTCCCGC GGCCTGGACA TTCCTCACGT GGATGTCGTC 
    GTAAATTTCG ACATACCAAC GCACAGCAAA GACTACATCC ATCGCGTAGG AAGAACAGCA 
    AGAGCGGGTC GCTCCGGCAA AGCCATCACC CTCGTGAGCC AGTACGACAT TGAATTGTAT 
    CAGCGCATCG AACATCTGTT GGGGAAGCAA CTACCACTGT ATAAGTGCGA GGAGGATGAG 
    GTGATGGCCC TTCAAGAGCG AGTCGCCGAG GCGCAGCGCA CCGCAAAACT GGAGCTGAAG 
    GATCTGGAAG ATACAAAGGG TGGCAAGGGC CACAAGAGAG GCGGGGACAC CCTTGATGAT 
    GATTCGGAGA ACTTCACGGG CGCACGCAAG CGCATGAAAC CGATGGGCGC CGTTGGTGGT 
    GGACACAAGC CTGGGGGAGG TGGAAGAAAG AGCTTTGGCA AAAAGAACTG GAGCAAGGGC 
    AAGCAAAAGA GATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC6548788 ( XM_001974031.3 ) cDNA ORF clone, Drosophila erecta -> XP_001974067.1 Drosophila erecta probable ATP-dependent RNA helicase DDX47 (LOC6548788), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID ODi05813
    Clone ID Related Accession (Same CDS sequence) XM_001974031.2 , XM_001974031.3
    Accession Version XM_001974031.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1575bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1541347200000
    Organism Drosophila erecta
    Product probable ATP-dependent RNA helicase DDX47 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020825207.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Nov 6, 2018 this sequence version replaced XM_001974031.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila erecta Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTCGGAAA CTTCAGAGGA CGAACAGACG CAATTGCAAA CCAGTGACGA AGAGGAGGAT 
    CTAAGTGGGG AAGAGGAGCA GGAAGATGGA GAGGAAATTG CAGATAACGA TTATGAAGAA 
    GAGGACGACG AGGCGGCACA AAGTGGCGAA GATGAGCCAT CTAAAGGCTC CGAGCCGGAG 
    GACGACACAG CAGATGATCA GAAGCTAACC TGGAAAGATC TCGGTCTCAA TGAGACTTTG 
    TGTCAAGCAT GTGACGAATT AAAGTGGAAA GCCCCTTCAA AGATTCAGCG GGAGGCTATT 
    CCGGTAGCCC TACAGGGCAA GGATGTGATT GGCCTGGCGG AGACCGGTTC CGGCAAGACA 
    GGAGCCTTCG CTCTACCCAT TTTACACGCC CTTCTCGAGA ATCCGCAGCG GTATTTTGCC 
    CTCGTGCTAA CTCCCACGAG GGAACTGGCC TTTCAAATTG GCGAGCAGTT TGAGGCCCTT 
    GGTAGCGGGA TCGGCATAAA GTGCTGCGTG GTTGTCGGCG GCATGGACAT GGTAGCTCAG 
    GGCCTTCAAT TGGCCAAGAA GCCGCATATT ATTATTGCTA CACCGGGTCG CTTGGTTGAT 
    CACCTAGAAA ACATGAAAGG TTTTAACCTT AAGGCTATTA AATACTTGGT CATGGACGAG 
    GCGGATCGCA TTCTCAACAT GGATTTTGAG GTGGAGCTGG ACAAGATCCT GAAGGTATTG 
    CCACGTGAAC GACGAACATT TCTGTTTAGT GCGACTATGA CCAAGAAGGT AAAGAAACTG 
    CAGCGCGCCT CCCTCAAGGA TCCGGTAAAG GTAGAGGTTT CTAACAAGTA TCAGACGGTT 
    GAGCAGCTGC AGCAATCATA TTTGTTCATC CCTGTTAAAT ACAAGGATGT GTATTTGGTT 
    CATATCCTCA ATGAACTGTC AGGCAACAGT TTCATGATAT TTTGCAGCAC CTGCAATAAC 
    ACAGTTAAGA CAGCATTGAT GCTTCGTGCG TTGGGATTGG CTGCTATTCC GCTGCATGGT 
    CAAATGTCGC AAAACAAGCG ACTGGCTGCC TTAAACAAAT TCAAGGCCAA AAATCGCTCA 
    ATACTCATTT CGACGGACGT GGCCTCCCGC GGCCTGGACA TTCCTCACGT GGATGTCGTC 
    GTAAATTTCG ACATACCAAC GCACAGCAAA GACTACATCC ATCGCGTAGG AAGAACAGCA 
    AGAGCGGGTC GCTCCGGCAA AGCCATCACC CTCGTGAGCC AGTACGACAT TGAATTGTAT 
    CAGCGCATCG AACATCTGTT GGGGAAGCAA CTACCACTGT ATAAGTGCGA GGAGGATGAG 
    GTGATGGCCC TTCAAGAGCG AGTCGCCGAG GCGCAGCGCA CCGCAAAACT GGAGCTGAAG 
    GATCTGGAAG ATACAAAGGG TGGCAAGGGC CACAAGAGAG GCGGGGACAC CCTTGATGAT 
    GATTCGGAGA ACTTCACGGG CGCACGCAAG CGCATGAAAC CGATGGGCGC CGTTGGTGGT 
    GGACACAAGC CTGGGGGAGG TGGAAGAAAG AGCTTTGGCA AAAAGAACTG GAGCAAGGGC 
    AAGCAAAAGA GATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_001974067.1
    CDS133..1707
    Translation

    Target ORF information:

    RefSeq Version XM_001974031.3
    Organism Drosophila erecta
    Definition Drosophila erecta probable ATP-dependent RNA helicase DDX47 (LOC6548788), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_001974031.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTCGGAAA CTTCAGAGGA CGAACAGACG CAATTGCAAA CCAGTGACGA AGAGGAGGAT 
    CTAAGTGGGG AAGAGGAGCA GGAAGATGGA GAGGAAATTG CAGATAACGA TTATGAAGAA 
    GAGGACGACG AGGCGGCACA AAGTGGCGAA GATGAGCCAT CTAAAGGCTC CGAGCCGGAG 
    GACGACACAG CAGATGATCA GAAGCTAACC TGGAAAGATC TCGGTCTCAA TGAGACTTTG 
    TGTCAAGCAT GTGACGAATT AAAGTGGAAA GCCCCTTCAA AGATTCAGCG GGAGGCTATT 
    CCGGTAGCCC TACAGGGCAA GGATGTGATT GGCCTGGCGG AGACCGGTTC CGGCAAGACA 
    GGAGCCTTCG CTCTACCCAT TTTACACGCC CTTCTCGAGA ATCCGCAGCG GTATTTTGCC 
    CTCGTGCTAA CTCCCACGAG GGAACTGGCC TTTCAAATTG GCGAGCAGTT TGAGGCCCTT 
    GGTAGCGGGA TCGGCATAAA GTGCTGCGTG GTTGTCGGCG GCATGGACAT GGTAGCTCAG 
    GGCCTTCAAT TGGCCAAGAA GCCGCATATT ATTATTGCTA CACCGGGTCG CTTGGTTGAT 
    CACCTAGAAA ACATGAAAGG TTTTAACCTT AAGGCTATTA AATACTTGGT CATGGACGAG 
    GCGGATCGCA TTCTCAACAT GGATTTTGAG GTGGAGCTGG ACAAGATCCT GAAGGTATTG 
    CCACGTGAAC GACGAACATT TCTGTTTAGT GCGACTATGA CCAAGAAGGT AAAGAAACTG 
    CAGCGCGCCT CCCTCAAGGA TCCGGTAAAG GTAGAGGTTT CTAACAAGTA TCAGACGGTT 
    GAGCAGCTGC AGCAATCATA TTTGTTCATC CCTGTTAAAT ACAAGGATGT GTATTTGGTT 
    CATATCCTCA ATGAACTGTC AGGCAACAGT TTCATGATAT TTTGCAGCAC CTGCAATAAC 
    ACAGTTAAGA CAGCATTGAT GCTTCGTGCG TTGGGATTGG CTGCTATTCC GCTGCATGGT 
    CAAATGTCGC AAAACAAGCG ACTGGCTGCC TTAAACAAAT TCAAGGCCAA AAATCGCTCA 
    ATACTCATTT CGACGGACGT GGCCTCCCGC GGCCTGGACA TTCCTCACGT GGATGTCGTC 
    GTAAATTTCG ACATACCAAC GCACAGCAAA GACTACATCC ATCGCGTAGG AAGAACAGCA 
    AGAGCGGGTC GCTCCGGCAA AGCCATCACC CTCGTGAGCC AGTACGACAT TGAATTGTAT 
    CAGCGCATCG AACATCTGTT GGGGAAGCAA CTACCACTGT ATAAGTGCGA GGAGGATGAG 
    GTGATGGCCC TTCAAGAGCG AGTCGCCGAG GCGCAGCGCA CCGCAAAACT GGAGCTGAAG 
    GATCTGGAAG ATACAAAGGG TGGCAAGGGC CACAAGAGAG GCGGGGACAC CCTTGATGAT 
    GATTCGGAGA ACTTCACGGG CGCACGCAAG CGCATGAAAC CGATGGGCGC CGTTGGTGGT 
    GGACACAAGC CTGGGGGAGG TGGAAGAAAG AGCTTTGGCA AAAAGAACTG GAGCAAGGGC 
    AAGCAAAAGA GATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC6548788 ( XM_026980621.1 ) cDNA ORF clone, Drosophila erecta -> XP_026836422.1 Drosophila erecta probable ATP-dependent RNA helicase DDX47 (LOC6548788), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID ODi219755
    Clone ID Related Accession (Same CDS sequence) XM_026980621.1
    Accession Version XM_026980621.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1680bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1541347200000
    Organism Drosophila erecta
    Product probable ATP-dependent RNA helicase DDX47 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_020825207.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila erecta Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGATATATA ACATAGAATC TGTAGTGCTT CAAAGACGCA ATTATATCGA TACTATCGAT 
    TCCATAACTA TTCATATTTT ACCGTCTCGA ACTCTTTCAT TTCGACCACG TGCTGGAACT 
    GAGGACGAAC AGACGCAATT GCAAACCAGT GACGAAGAGG AGGATCTAAG TGGGGAAGAG 
    GAGCAGGAAG ATGGAGAGGA AATTGCAGAT AACGATTATG AAGAAGAGGA CGACGAGGCG 
    GCACAAAGTG GCGAAGATGA GCCATCTAAA GGCTCCGAGC CGGAGGACGA CACAGCAGAT 
    GATCAGAAGC TAACCTGGAA AGATCTCGGT CTCAATGAGA CTTTGTGTCA AGCATGTGAC 
    GAATTAAAGT GGAAAGCCCC TTCAAAGATT CAGCGGGAGG CTATTCCGGT AGCCCTACAG 
    GGCAAGGATG TGATTGGCCT GGCGGAGACC GGTTCCGGCA AGACAGGAGC CTTCGCTCTA 
    CCCATTTTAC ACGCCCTTCT CGAGAATCCG CAGCGGTATT TTGCCCTCGT GCTAACTCCC 
    ACGAGGGAAC TGGCCTTTCA AATTGGCGAG CAGTTTGAGG CCCTTGGTAG CGGGATCGGC 
    ATAAAGTGCT GCGTGGTTGT CGGCGGCATG GACATGGTAG CTCAGGGCCT TCAATTGGCC 
    AAGAAGCCGC ATATTATTAT TGCTACACCG GGTCGCTTGG TTGATCACCT AGAAAACATG 
    AAAGGTTTTA ACCTTAAGGC TATTAAATAC TTGGTCATGG ACGAGGCGGA TCGCATTCTC 
    AACATGGATT TTGAGGTGGA GCTGGACAAG ATCCTGAAGG TATTGCCACG TGAACGACGA 
    ACATTTCTGT TTAGTGCGAC TATGACCAAG AAGGTAAAGA AACTGCAGCG CGCCTCCCTC 
    AAGGATCCGG TAAAGGTAGA GGTTTCTAAC AAGTATCAGA CGGTTGAGCA GCTGCAGCAA 
    TCATATTTGT TCATCCCTGT TAAATACAAG GATGTGTATT TGGTTCATAT CCTCAATGAA 
    CTGTCAGGCA ACAGTTTCAT GATATTTTGC AGCACCTGCA ATAACACAGT TAAGACAGCA 
    TTGATGCTTC GTGCGTTGGG ATTGGCTGCT ATTCCGCTGC ATGGTCAAAT GTCGCAAAAC 
    AAGCGACTGG CTGCCTTAAA CAAATTCAAG GCCAAAAATC GCTCAATACT CATTTCGACG 
    GACGTGGCCT CCCGCGGCCT GGACATTCCT CACGTGGATG TCGTCGTAAA TTTCGACATA 
    CCAACGCACA GCAAAGACTA CATCCATCGC GTAGGAAGAA CAGCAAGAGC GGGTCGCTCC 
    GGCAAAGCCA TCACCCTCGT GAGCCAGTAC GACATTGAAT TGTATCAGCG CATCGAACAT 
    CTGTTGGGGA AGCAACTACC ACTGTATAAG TGCGAGGAGG ATGAGGTGAT GGCCCTTCAA 
    GAGCGAGTCG CCGAGGCGCA GCGCACCGCA AAACTGGAGC TGAAGGATCT GGAAGATACA 
    AAGGGTGGCA AGGGCCACAA GAGAGGCGGG GACACCCTTG ATGATGATTC GGAGAACTTC 
    ACGGGCGCAC GCAAGCGCAT GAAACCGATG GGCGCCGTTG GTGGTGGACA CAAGCCTGGG 
    GGAGGTGGAA GAAAGAGCTT TGGCAAAAAG AACTGGAGCA AGGGCAAGCA AAAGAGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_026836422.1
    CDS16..1695
    Translation

    Target ORF information:

    RefSeq Version XM_026980621.1
    Organism Drosophila erecta
    Definition Drosophila erecta probable ATP-dependent RNA helicase DDX47 (LOC6548788), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_026980621.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGATATATA ACATAGAATC TGTAGTGCTT CAAAGACGCA ATTATATCGA TACTATCGAT 
    TCCATAACTA TTCATATTTT ACCGTCTCGA ACTCTTTCAT TTCGACCACG TGCTGGAACT 
    GAGGACGAAC AGACGCAATT GCAAACCAGT GACGAAGAGG AGGATCTAAG TGGGGAAGAG 
    GAGCAGGAAG ATGGAGAGGA AATTGCAGAT AACGATTATG AAGAAGAGGA CGACGAGGCG 
    GCACAAAGTG GCGAAGATGA GCCATCTAAA GGCTCCGAGC CGGAGGACGA CACAGCAGAT 
    GATCAGAAGC TAACCTGGAA AGATCTCGGT CTCAATGAGA CTTTGTGTCA AGCATGTGAC 
    GAATTAAAGT GGAAAGCCCC TTCAAAGATT CAGCGGGAGG CTATTCCGGT AGCCCTACAG 
    GGCAAGGATG TGATTGGCCT GGCGGAGACC GGTTCCGGCA AGACAGGAGC CTTCGCTCTA 
    CCCATTTTAC ACGCCCTTCT CGAGAATCCG CAGCGGTATT TTGCCCTCGT GCTAACTCCC 
    ACGAGGGAAC TGGCCTTTCA AATTGGCGAG CAGTTTGAGG CCCTTGGTAG CGGGATCGGC 
    ATAAAGTGCT GCGTGGTTGT CGGCGGCATG GACATGGTAG CTCAGGGCCT TCAATTGGCC 
    AAGAAGCCGC ATATTATTAT TGCTACACCG GGTCGCTTGG TTGATCACCT AGAAAACATG 
    AAAGGTTTTA ACCTTAAGGC TATTAAATAC TTGGTCATGG ACGAGGCGGA TCGCATTCTC 
    AACATGGATT TTGAGGTGGA GCTGGACAAG ATCCTGAAGG TATTGCCACG TGAACGACGA 
    ACATTTCTGT TTAGTGCGAC TATGACCAAG AAGGTAAAGA AACTGCAGCG CGCCTCCCTC 
    AAGGATCCGG TAAAGGTAGA GGTTTCTAAC AAGTATCAGA CGGTTGAGCA GCTGCAGCAA 
    TCATATTTGT TCATCCCTGT TAAATACAAG GATGTGTATT TGGTTCATAT CCTCAATGAA 
    CTGTCAGGCA ACAGTTTCAT GATATTTTGC AGCACCTGCA ATAACACAGT TAAGACAGCA 
    TTGATGCTTC GTGCGTTGGG ATTGGCTGCT ATTCCGCTGC ATGGTCAAAT GTCGCAAAAC 
    AAGCGACTGG CTGCCTTAAA CAAATTCAAG GCCAAAAATC GCTCAATACT CATTTCGACG 
    GACGTGGCCT CCCGCGGCCT GGACATTCCT CACGTGGATG TCGTCGTAAA TTTCGACATA 
    CCAACGCACA GCAAAGACTA CATCCATCGC GTAGGAAGAA CAGCAAGAGC GGGTCGCTCC 
    GGCAAAGCCA TCACCCTCGT GAGCCAGTAC GACATTGAAT TGTATCAGCG CATCGAACAT 
    CTGTTGGGGA AGCAACTACC ACTGTATAAG TGCGAGGAGG ATGAGGTGAT GGCCCTTCAA 
    GAGCGAGTCG CCGAGGCGCA GCGCACCGCA AAACTGGAGC TGAAGGATCT GGAAGATACA 
    AAGGGTGGCA AGGGCCACAA GAGAGGCGGG GACACCCTTG ATGATGATTC GGAGAACTTC 
    ACGGGCGCAC GCAAGCGCAT GAAACCGATG GGCGCCGTTG GTGGTGGACA CAAGCCTGGG 
    GGAGGTGGAA GAAAGAGCTT TGGCAAAAAG AACTGGAGCA AGGGCAAGCA AAAGAGATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Assembly reconciliation.
    Bioinformatics (Oxford, England)24(1)42-5(2008 Jan)
    Zimin AV,Smith DR,Sutton G,Yorke JA


    Evolution of genes and genomes on the Drosophila phylogeny.
    Nature450(7167)203-18(2007 Nov)
    ,Clark AG,Eisen MB,Smith DR,Bergman CM,Oliver B,Markow TA,Kaufman TC,Kellis M,Gelbart W,Iyer VN,Pollard DA,Sackton TB,Larracuente AM,Singh ND,Abad JP,Abt DN,Adryan B,Aguade M,Akashi H,Anderson WW,Aquadro CF,Ardell DH,Arguello R,Artieri CG,Barbash DA,Barker D,Barsanti P,Batterham P,Batzoglou S,Begun D,Bhutkar A,Blanco E,Bosak SA,Bradley RK,Brand AD,Brent MR,Brooks AN,Brown RH,Butlin RK,Caggese C,Calvi BR,Bernardo de Carvalho A,Caspi A,Castrezana S,Celniker SE,Chang JL,Chapple C,Chatterji S,Chinwalla A,Civetta A,Clifton SW,Comeron JM,Costello JC,Coyne JA,Daub J,David RG,Delcher AL,Delehaunty K,Do CB,Ebling H,Edwards K,Eickbush T,Evans JD,Filipski A,Findeiss S,Freyhult E,Fulton L,Fulton R,Garcia AC,Gardiner A,Garfield DA,Garvin BE,Gibson G,Gilbert D,Gnerre S,Godfrey J,Good R,Gotea V,Gravely B,Greenberg AJ,Griffiths-Jones S,Gross S,Guigo R,Gustafson EA,Haerty W,Hahn MW,Halligan DL,Halpern AL,Halter GM,Han MV,Heger A,Hillier L,Hinrichs AS,Holmes I,Hoskins RA,Hubisz MJ,Hultmark D,Huntley MA,Jaffe DB,Jagadeeshan S,Jeck WR,Johnson J,Jones CD,Jordan WC,Karpen GH,Kataoka E,Keightley PD,Kheradpour P,Kirkness EF,Koerich LB,Kristiansen K,Kudrna D,Kulathinal RJ,Kumar S,Kwok R,Lander E,Langley CH,Lapoint R,Lazzaro BP,Lee SJ,Levesque L,Li R,Lin CF,Lin MF,Lindblad-Toh K,Llopart A,Long M,Low L,Lozovsky E,Lu J,Luo M,Machado CA,Makalowski W,Marzo M,Matsuda M,Matzkin L,McAllister B,McBride CS,McKernan B,McKernan K,Mendez-Lago M,Minx P,Mollenhauer MU,Montooth K,Mount SM,Mu X,Myers E,Negre B,Newfeld S,Nielsen R,Noor MA,O'Grady P,Pachter L,Papaceit M,Parisi MJ,Parisi M,Parts L,Pedersen JS,Pesole G,Phillippy AM,Ponting CP,Pop M,Porcelli D,Powell JR,Prohaska S,Pruitt K,Puig M,Quesneville H,Ram KR,Rand D,Rasmussen MD,Reed LK,Reenan R,Reily A,Remington KA,Rieger TT,Ritchie MG,Robin C,Rogers YH,Rohde C,Rozas J,Rubenfield MJ,Ruiz A,Russo S,Salzberg SL,Sanchez-Gracia A,Saranga DJ,Sato H,Schaeffer SW,Schatz MC,Schlenke T,Schwartz R,Segarra C,Singh RS,Sirot L,Sirota M,Sisneros NB,Smith CD,Smith TF,Spieth J,Stage DE,Stark A,Stephan W,Strausberg RL,Strempel S,Sturgill D,Sutton G,Sutton GG,Tao W,Teichmann S,Tobari YN,Tomimura Y,Tsolas JM,Valente VL,Venter E,Venter JC,Vicario S,Vieira FG,Vilella AJ,Villasante A,Walenz B,Wang J,Wasserman M,Watts T,Wilson D,Wilson RK,Wing RA,Wolfner MF,Wong A,Wong GK,Wu CI,Wu G,Yamamoto D,Yang HP,Yang SP,Yorke JA,Yoshida K,Zdobnov E,Zhang P,Zhang Y,Zimin AV,Baldwin J,Abdouelleil A,Abdulkadir J,Abebe A,Abera B,Abreu J,Acer SC,Aftuck L,Alexander A,An P,Anderson E,Anderson S,Arachi H,Azer M,Bachantsang P,Barry A,Bayul T,Berlin A,Bessette D,Bloom T,Blye J,Boguslavskiy L,Bonnet C,Boukhgalter B,Bourzgui I,Brown A,Cahill P,Channer S,Cheshatsang Y,Chuda L,Citroen M,Collymore A,Cooke P,Costello M,D'Aco K,Daza R,De Haan G,DeGray S,DeMaso C,Dhargay N,Dooley K,Dooley E,Doricent M,Dorje P,Dorjee K,Dupes A,Elong R,Falk J,Farina A,Faro S,Ferguson D,Fisher S,Foley CD,Franke A,Friedrich D,Gadbois L,Gearin G,Gearin CR,Giannoukos G,Goode T,Graham J,Grandbois E,Grewal S,Gyaltsen K,Hafez N,Hagos B,Hall J,Henson C,Hollinger A,Honan T,Huard MD,Hughes L,Hurhula B,Husby ME,Kamat A,Kanga B,Kashin S,Khazanovich D,Kisner P,Lance K,Lara M,Lee W,Lennon N,Letendre F,LeVine R,Lipovsky A,Liu X,Liu J,Liu S,Lokyitsang T,Lokyitsang Y,Lubonja R,Lui A,MacDonald P,Magnisalis V,Maru K,Matthews C,McCusker W,McDonough S,Mehta T,Meldrim J,Meneus L,Mihai O,Mihalev A,Mihova T,Mittelman R,Mlenga V,Montmayeur A,Mulrain L,Navidi A,Naylor J,Negash T,Nguyen T,Nguyen N,Nicol R,Norbu C,Norbu N,Novod N,O'Neill B,Osman S,Markiewicz E,Oyono OL,Patti C,Phunkhang P,Pierre F,Priest M,Raghuraman S,Rege F,Reyes R,Rise C,Rogov P,Ross K,Ryan E,Settipalli S,Shea T,Sherpa N,Shi L,Shih D,Sparrow T,Spaulding J,Stalker J,Stange-Thomann N,Stavropoulos S,Stone C,Strader C,Tesfaye S,Thomson T,Thoulutsang Y,Thoulutsang D,Topham K,Topping I,Tsamla T,Vassiliev H,Vo A,Wangchuk T,Wangdi T,Weiand M,Wilkinson J,Wilson A,Yadav S,Young G,Yu Q,Zembek L,Zhong D,Zimmer A,Zwirko Z,Jaffe DB,Alvarez P,Brockman W,Butler J,Chin C,Gnerre S,Grabherr M,Kleber M,Mauceli E,MacCallum I


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