Gene Symbol | LOC101735954 |
Entrez Gene ID | 101735954 |
Full Name | cytoplasmic polyadenylation element-binding protein 2 |
Gene Type | protein-coding |
Organism | Bombyx mori(Domestic silkworm) |
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ORF » Species Summary » Bombyx mori » LOC101735954 cDNA ORF clone
Gene Symbol | LOC101735954 |
Entrez Gene ID | 101735954 |
Full Name | cytoplasmic polyadenylation element-binding protein 2 |
Gene Type | protein-coding |
Organism | Bombyx mori(Domestic silkworm) |
mRNA | Protein | Name |
---|---|---|
XM_012692826.1 | XP_012548280.1 | probable RNA-binding protein orb2 isoform X2 |
XM_012692831.1 | XP_012548285.1 | probable RNA-binding protein orb2 isoform X2 |
XM_012692819.1 | XP_012548273.1 | cytoplasmic polyadenylation element-binding protein 2 isoform X1 |
XM_012692819.2 | XP_012548273.1 | cytoplasmic polyadenylation element-binding protein 2 |
XM_012692823.1 | XP_012548277.1 | probable RNA-binding protein orb2 isoform X2 |
Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori.
Suetsugu Y, Futahashi R, Kanamori H, Kadono-Okuda K, Sasanuma S, Narukawa J, Ajimura M, Jouraku A, Namiki N, Shimomura M, Sezutsu H, Osanai-Futahashi M, Suzuki MG, Daimon T, Shinoda T, Taniai K, Asaoka K, Niwa R, Kawaoka S, Katsuma S, Tamura T, Noda H, Kasahara M, Sugano S, Suzuki Y, Fujiwara H, Kataoka H, Arunkumar KP, Tomar A, Nagaraju J, Goldsmith MR, Feng Q, Xia Q, Yamamoto K, Shimada T, Mita K
G3 (Bethesda, Md.)3(9)1481-92(2013 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC101735954 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC101735954 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBg15043 | |
Clone ID Related Accession (Same CDS sequence) | XM_012692819.1 , XM_012692819.2 | |
Accession Version | XM_012692819.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1278bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1433347200000 | |
Organism | Bombyx mori(Domestic silkworm) | |
Product | cytoplasmic polyadenylation element-binding protein 2 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004581684.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bombyx mori Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGCGAGC TACAATATCC AGGCGCTGCC AGCGTCACGG ACGACGAGAG GCAATACCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012548273.1 |
CDS | 25..1302 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGGCGAGC TACAATATCC AGGCGCTGCC AGCGTCACGG ACGACGAGAG GCAATACCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBg15043 | |
Clone ID Related Accession (Same CDS sequence) | XM_012692819.1 , XM_012692819.2 | |
Accession Version | XM_012692819.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1278bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1496505600000 | |
Organism | Bombyx mori(domestic silkworm) | |
Product | cytoplasmic polyadenylation element-binding protein 2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004581684.1) and transcript sequence (AK387653.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 5, 2017 this sequence version replaced XM_012692819.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bombyx mori Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 63 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGGGCGAGC TACAATATCC AGGCGCTGCC AGCGTCACGG ACGACGAGAG GCAATACCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012548273.1 |
CDS | 64..1341 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGGCGAGC TACAATATCC AGGCGCTGCC AGCGTCACGG ACGACGAGAG GCAATACCGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBg15044 | |
Clone ID Related Accession (Same CDS sequence) | XM_012692826.1 , XM_012692831.1 , XM_012692823.1 | |
Accession Version | XM_012692826.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1017bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1433347200000 | |
Organism | Bombyx mori(Domestic silkworm) | |
Product | probable RNA-binding protein orb2 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004581684.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bombyx mori Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTAACG AACATTTTGT GAGCAGCATG ACGTACTACG GCAAGTCGCC TTTCTTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012548280.1 |
CDS | 162..1178 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATTAACG AACATTTTGT GAGCAGCATG ACGTACTACG GCAAGTCGCC TTTCTTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBg15044 | |
Clone ID Related Accession (Same CDS sequence) | XM_012692826.1 , XM_012692831.1 , XM_012692823.1 | |
Accession Version | XM_012692831.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1017bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1433347200000 | |
Organism | Bombyx mori(Domestic silkworm) | |
Product | probable RNA-binding protein orb2 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004581684.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bombyx mori Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTAACG AACATTTTGT GAGCAGCATG ACGTACTACG GCAAGTCGCC TTTCTTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012548285.1 |
CDS | 104..1120 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATTAACG AACATTTTGT GAGCAGCATG ACGTACTACG GCAAGTCGCC TTTCTTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBg15044 | |
Clone ID Related Accession (Same CDS sequence) | XM_012692826.1 , XM_012692831.1 , XM_012692823.1 | |
Accession Version | XM_012692823.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1017bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1433347200000 | |
Organism | Bombyx mori(Domestic silkworm) | |
Product | probable RNA-binding protein orb2 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004581684.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bombyx mori Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATTAACG AACATTTTGT GAGCAGCATG ACGTACTACG GCAAGTCGCC TTTCTTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012548277.1 |
CDS | 201..1217 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGATTAACG AACATTTTGT GAGCAGCATG ACGTACTACG GCAAGTCGCC TTTCTTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori. |