Gene Symbol | Aubergine |
Entrez Gene ID | 100125336 |
Full Name | aubergine protein |
Synonyms | Piwi,SIWI,siwi1 |
Gene Type | protein-coding |
Organism | Bombyx mori(domestic silkworm) |
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ORF » Species Summary » Bombyx mori » Aubergine cDNA ORF clone
Gene Symbol | Aubergine |
Entrez Gene ID | 100125336 |
Full Name | aubergine protein |
Synonyms | Piwi,SIWI,siwi1 |
Gene Type | protein-coding |
Organism | Bombyx mori(domestic silkworm) |
mRNA | Protein | Name |
---|---|---|
XM_012689822.1 | XP_012545276.1 | aubergine protein isoform X1 |
XM_012689822.2 | XP_012545276.1 | aubergine protein isoform X1 |
NM_001104596.2 | NP_001098066.2 | piwi-like protein Siwi |
Crystal Structure of Silkworm PIWI-Clade Argonaute Siwi Bound to piRNA.
Matsumoto N, Nishimasu H, Sakakibara K, Nishida KM, Hirano T, Ishitani R, Siomi H, Siomi MC, Nureki O
Cell167(2)484-497.e9(2016 Oct)
The initial uridine of primary piRNAs does not create the tenth adenine that Is the hallmark of secondary piRNAs.
Wang W, Yoshikawa M, Han BW, Izumi N, Tomari Y, Weng Z, Zamore PD
Molecular cell56(5)708-16(2014 Dec)
Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis.
Ou J, Deng HM, Zheng SC, Huang LH, Feng QL, Liu L
BMC genomics15820(2014 Sep)
Roles of Piwi proteins in transcriptional regulation mediated by HP1s in cultured silkworm cells.
Tatsuke T, Zhu L, Li Z, Mitsunobu H, Yoshimura K, Mon H, Lee JM, Kusakabe T
PloS one9(3)e92313(2014)
Characterization of Argonaute family members in the silkworm, Bombyx mori.
Wang GH, Jiang L, Zhu L, Cheng TC, Niu WH, Yan YF, Xia QY
Insect science20(1)78-91(2013 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Aubergine gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Aubergine cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBg00744 | |
Clone ID Related Accession (Same CDS sequence) | NM_001104596.2 | |
Accession Version | NM_001104596.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2700bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1539878400000 | |
Organism | Bombyx mori(domestic silkworm) | |
Product | piwi-like protein Siwi | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB332313.2. On Feb 1, 2008 this sequence version replaced NM_001104596.1. ##Evidence-Data-START## Transcript exon combination :: AB332313.2 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00016912, SAMD00016913 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCAGAAC CGAGAGGTAG AGGACGAGCT CGAGGACGCG CTGGTCGTGG TGGTGATGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001098066.2 |
CDS | 1..2700 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCAGAAC CGAGAGGTAG AGGACGAGCT CGAGGACGCG CTGGTCGTGG TGGTGATGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBg14261 | |
Clone ID Related Accession (Same CDS sequence) | XM_012689822.1 , XM_012689822.2 | |
Accession Version | XM_012689822.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2700bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1433347200000 | |
Organism | Bombyx mori(Domestic silkworm) | |
Product | aubergine protein isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004581733.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bombyx mori Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAGAAC CGAGAGGTAG AGGACGAGCT CGAGGACGCG CTGGTCGTGG TGGTGATGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012545276.1 |
CDS | 124..2823 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCAGAAC CGAGAGGTAG AGGACGAGCT CGAGGACGCG CTGGTCGTGG TGGTGATGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBg14261 | |
Clone ID Related Accession (Same CDS sequence) | XM_012689822.1 , XM_012689822.2 | |
Accession Version | XM_012689822.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2700bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1496505600000 | |
Organism | Bombyx mori(domestic silkworm) | |
Product | aubergine protein isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004581733.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 5, 2017 this sequence version replaced XM_012689822.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bombyx mori Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAGAAC CGAGAGGTAG AGGACGAGCT CGAGGACGCG CTGGTCGTGG TGGTGATGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012545276.1 |
CDS | 128..2827 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTCAGAAC CGAGAGGTAG AGGACGAGCT CGAGGACGCG CTGGTCGTGG TGGTGATGGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Crystal Structure of Silkworm PIWI-Clade Argonaute Siwi Bound to piRNA. |
The initial uridine of primary piRNAs does not create the tenth adenine that Is the hallmark of secondary piRNAs. |
Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. |
Roles of Piwi proteins in transcriptional regulation mediated by HP1s in cultured silkworm cells. |
Characterization of Argonaute family members in the silkworm, Bombyx mori. |