Gene Symbol | STT3B |
Entrez Gene ID | 551853 |
Full Name | STT3, subunit of the oligosaccharyltransferase complex, homolog B |
Synonyms | OstStt3 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
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ORF » Species Summary » Apis mellifera » STT3B cDNA ORF clone
Gene Symbol | STT3B |
Entrez Gene ID | 551853 |
Full Name | STT3, subunit of the oligosaccharyltransferase complex, homolog B |
Synonyms | OstStt3 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
mRNA | Protein | Name |
---|---|---|
NM_001242437.1 | NP_001229366.1 | STT3, subunit of the oligosaccharyltransferase complex, homolog B |
NM_001242436.1 | NP_001229365.1 | STT3, subunit of the oligosaccharyltransferase complex, homolog B |
XM_026440540.1 | XP_026296325.1 | STT3, subunit of the oligosaccharyltransferase complex, homolog B isoform X2 |
XM_026440539.1 | XP_026296324.1 | STT3, subunit of the oligosaccharyltransferase complex, homolog B isoform X1 |
XM_026440541.1 | XP_026296326.1 | STT3, subunit of the oligosaccharyltransferase complex, homolog B isoform X3 |
Finding the missing honey bee genes: lessons learned from a genome upgrade.
Elsik CG, Worley KC, Bennett AK, Beye M, Camara F, Childers CP, de Graaf DC, Debyser G, Deng J, Devreese B, Elhaik E, Evans JD, Foster LJ, Graur D, Guigo R, , Hoff KJ, Holder ME, Hudson ME, Hunt GJ, Jiang H, Joshi V, Khetani RS, Kosarev P, Kovar CL, Ma J, Maleszka R, Moritz RF, Munoz-Torres MC, Murphy TD, Muzny DM, Newsham IF, Reese JT, Robertson HM, Robinson GE, Rueppell O, Solovyev V, Stanke M, Stolle E, Tsuruda JM, Vaerenbergh MV, Waterhouse RM, Weaver DB, Whitfield CW, Wu Y, Zdobnov EM, Zhang L, Zhu D, Gibbs RA,
BMC genomics1586(2014 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following STT3B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the STT3B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHd00203 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242437.1 , NM_001242436.1 , XM_026440539.1 | |
Accession Version | NM_001242437.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2406bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1556899200000 | |
Organism | Apis mellifera(honey bee) | |
Product | STT3, subunit of the oligosaccharyltransferase complex, homolog B | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from HP544373.1. Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: HP544373.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00008880, SAMN00120365 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTTGTCAA ATAGAACATC CATGATAAAT ACCAAAAAAG ATATGTTTCC CGATAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001229366.1 |
CDS | 128..2533 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTGTCAA ATAGAACATC CATGATAAAT ACCAAAAAAG ATATGTTTCC CGATAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00203 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242437.1 , NM_001242436.1 , XM_026440539.1 | |
Accession Version | NM_001242436.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2406bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1556899200000 | |
Organism | Apis mellifera(honey bee) | |
Product | STT3, subunit of the oligosaccharyltransferase complex, homolog B | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from HP544371.1. On Jun 7, 2011 this sequence version replaced XR_015011.2. Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Both variants 1 and 2 encode the same protein. ##Evidence-Data-START## Transcript exon combination :: HP544371.1, HP480582.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00008880, SAMN00113341 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTTGTCAA ATAGAACATC CATGATAAAT ACCAAAAAAG ATATGTTTCC CGATAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001229365.1 |
CDS | 90..2495 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTGTCAA ATAGAACATC CATGATAAAT ACCAAAAAAG ATATGTTTCC CGATAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00203 | |
Clone ID Related Accession (Same CDS sequence) | NM_001242437.1 , NM_001242436.1 , XM_026440539.1 | |
Accession Version | XM_026440539.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2406bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | STT3, subunit of the oligosaccharyltransferase complex, homolog B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037642.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGTCAA ATAGAACATC CATGATAAAT ACCAAAAAAG ATATGTTTCC CGATAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026296324.1 |
CDS | 33..2438 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTGTCAA ATAGAACATC CATGATAAAT ACCAAAAAAG ATATGTTTCC CGATAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd30745 | |
Clone ID Related Accession (Same CDS sequence) | XM_026440540.1 | |
Accession Version | XM_026440540.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2352bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | STT3, subunit of the oligosaccharyltransferase complex, homolog B isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037642.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGTCAA ATAGAACATC CATGATAAAT ACCAAAAAAG ATATGTTTCC CGATAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026296325.1 |
CDS | 14..2365 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTGTCAA ATAGAACATC CATGATAAAT ACCAAAAAAG ATATGTTTCC CGATAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd30746 | |
Clone ID Related Accession (Same CDS sequence) | XM_026440541.1 | |
Accession Version | XM_026440541.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2346bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | STT3, subunit of the oligosaccharyltransferase complex, homolog B isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037642.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTGTCAA ATAGAACATC CATGATAAAT ACCAAAAAAG ATATGTTTCC CGATAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026296326.1 |
CDS | 14..2359 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTGTCAA ATAGAACATC CATGATAAAT ACCAAAAAAG ATATGTTTCC CGATAAGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Finding the missing honey bee genes: lessons learned from a genome upgrade. |