Gene Symbol | Calpb |
Entrez Gene ID | 411453 |
Full Name | calpain-B |
Synonyms | GB15925 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
ORF » Species Summary » Apis mellifera » Calpb cDNA ORF clone
Gene Symbol | Calpb |
Entrez Gene ID | 411453 |
Full Name | calpain-B |
Synonyms | GB15925 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
mRNA | Protein | Name |
---|---|---|
NM_001160405.2 | NP_001153877.1 | calpain-B |
XM_026446368.1 | XP_026302153.1 | calpain-B isoform X2 |
XM_026446371.1 | XP_026302156.1 | calpain-B isoform X5 |
XM_026446375.1 | XP_026302160.1 | calpain-B isoform X8 |
XM_026446369.1 | XP_026302154.1 | calpain-B isoform X3 |
XM_026446372.1 | XP_026302157.1 | calpain-B isoform X6 |
XM_026446373.1 | XP_026302158.1 | calpain-B isoform X7 |
XM_026446370.1 | XP_026302155.1 | calpain-B isoform X4 |
XM_026446367.1 | XP_026302152.1 | calpain-B isoform X1 |
XM_026446374.1 | XP_026302159.1 | calpain-B isoform X7 |
Finding the missing honey bee genes: lessons learned from a genome upgrade.
Elsik CG, Worley KC, Bennett AK, Beye M, Camara F, Childers CP, de Graaf DC, Debyser G, Deng J, Devreese B, Elhaik E, Evans JD, Foster LJ, Graur D, Guigo R, , Hoff KJ, Holder ME, Hudson ME, Hunt GJ, Jiang H, Joshi V, Khetani RS, Kosarev P, Kovar CL, Ma J, Maleszka R, Moritz RF, Munoz-Torres MC, Murphy TD, Muzny DM, Newsham IF, Reese JT, Robertson HM, Robinson GE, Rueppell O, Solovyev V, Stanke M, Stolle E, Tsuruda JM, Vaerenbergh MV, Waterhouse RM, Weaver DB, Whitfield CW, Wu Y, Zdobnov EM, Zhang L, Zhu D, Gibbs RA,
BMC genomics1586(2014 Jan)
Insights into social insects from the genome of the honeybee Apis mellifera.
Nature443(7114)931-49(2006 Oct)
Annotated expressed sequence tags and cDNA microarrays for studies of brain and behavior in the honey bee.
Whitfield CW, Band MR, Bonaldo MF, Kumar CG, Liu L, Pardinas JR, Robertson HM, Soares MB, Robinson GE
Genome research12(4)555-66(2002 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Calpb gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Calpb cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHd00331 | |
Clone ID Related Accession (Same CDS sequence) | NM_001160405.2 | |
Accession Version | NM_001160405.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2166bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1535644800000 | |
Organism | Apis mellifera(honey bee) | |
Product | calpain-B | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AADG06003859.1, BI502923.1, BI504898.1 and DB770650.1. On Apr 19, 2011 this sequence version replaced NM_001160405.1. ##Evidence-Data-START## Transcript exon combination :: HP545494.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00008880, SAMN00113341 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGAGTTATT ACGACGATAG GAATGGAACT GTGCTTAACG ATGTGTTCGT TAAGACAGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001153877.1 |
CDS | 264..2429 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGTTATT ACGACGATAG GAATGGAACT GTGCTTAACG ATGTGTTCGT TAAGACAGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd28416 | |
Clone ID Related Accession (Same CDS sequence) | XM_026446367.1 | |
Accession Version | XM_026446367.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2517bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | calpain-B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037639.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAGAAA AACAGAAATA CACAAGTTAC AAATATTTAA ATTATGTGCA ACAAGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026302152.1 |
CDS | 48..2564 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAAGAAA AACAGAAATA CACAAGTTAC AAATATTTAA ATTATGTGCA ACAAGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd28417 | |
Clone ID Related Accession (Same CDS sequence) | XM_026446368.1 | |
Accession Version | XM_026446368.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2472bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | calpain-B isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037639.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAGAAA AACAGAAATA CACAAGTTAC AAATATTTAA ATTATGTGCA ACAAGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026302153.1 |
CDS | 45..2516 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAAGAAA AACAGAAATA CACAAGTTAC AAATATTTAA ATTATGTGCA ACAAGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd28418 | |
Clone ID Related Accession (Same CDS sequence) | XM_026446369.1 | |
Accession Version | XM_026446369.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2382bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | calpain-B isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037639.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAGAAA AACAGAAATA CACAAGTTAC AAATATTTAA ATTATGTGCA ACAAGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026302154.1 |
CDS | 39..2420 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAAGAAA AACAGAAATA CACAAGTTAC AAATATTTAA ATTATGTGCA ACAAGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd28419 | |
Clone ID Related Accession (Same CDS sequence) | XM_026446370.1 | |
Accession Version | XM_026446370.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2346bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | calpain-B isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037639.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGTTATT ACGACGATAG GAATGGAACT GTGCTTAACG ATGTGTTCGT TAAGACAGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026302155.1 |
CDS | 491..2836 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAGTTATT ACGACGATAG GAATGGAACT GTGCTTAACG ATGTGTTCGT TAAGACAGCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd28420 | |
Clone ID Related Accession (Same CDS sequence) | XM_026446371.1 | |
Accession Version | XM_026446371.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2337bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | calpain-B isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037639.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAGAAA AACAGAAATA CACAAGTTAC AAATATTTAA ATTATGTGCA ACAAGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026302156.1 |
CDS | 36..2372 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAAGAAA AACAGAAATA CACAAGTTAC AAATATTTAA ATTATGTGCA ACAAGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd28421 | |
Clone ID Related Accession (Same CDS sequence) | XM_026446372.1 | |
Accession Version | XM_026446372.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2319bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | calpain-B isoform X6 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037639.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAATCACT TTTCATATGG ATGGAAACAA GAAATAACCG AACCAGAATT TATAAAACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026302157.1 |
CDS | 249..2567 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAATCACT TTTCATATGG ATGGAAACAA GAAATAACCG AACCAGAATT TATAAAACAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd28422 | |
Clone ID Related Accession (Same CDS sequence) | XM_026446373.1 , XM_026446374.1 | |
Accession Version | XM_026446373.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2067bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | calpain-B isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037639.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAATTG CGGACAATCC TCAACTGTTC GTTGAAGGTT TTTCCCGATT CGACGTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026302158.1 |
CDS | 382..2448 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAAATTG CGGACAATCC TCAACTGTTC GTTGAAGGTT TTTCCCGATT CGACGTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd28422 | |
Clone ID Related Accession (Same CDS sequence) | XM_026446373.1 , XM_026446374.1 | |
Accession Version | XM_026446374.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2067bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | calpain-B isoform X7 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037639.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAATTG CGGACAATCC TCAACTGTTC GTTGAAGGTT TTTCCCGATT CGACGTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026302159.1 |
CDS | 362..2428 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGAAATTG CGGACAATCC TCAACTGTTC GTTGAAGGTT TTTCCCGATT CGACGTTCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd28423 | |
Clone ID Related Accession (Same CDS sequence) | XM_026446375.1 | |
Accession Version | XM_026446375.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1989bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | calpain-B isoform X8 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037639.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGAAGAAA AACAGAAATA CACAAGTTAC AAATATTTAA ATTATGTGCA ACAAGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026302160.1 |
CDS | 51..2039 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGAAGAAA AACAGAAATA CACAAGTTAC AAATATTTAA ATTATGTGCA ACAAGATATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Finding the missing honey bee genes: lessons learned from a genome upgrade. |
Insights into social insects from the genome of the honeybee Apis mellifera. |
Annotated expressed sequence tags and cDNA microarrays for studies of brain and behavior in the honey bee. |