Gene Symbol | Syt1 |
Entrez Gene ID | 408613 |
Full Name | synaptotagmin 1 |
Synonyms | GB20036,Syti,syt |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
Learn More
Learn More
Learn More
Learn More
ORF » Species Summary » Apis mellifera » Syt1 cDNA ORF clone
Gene Symbol | Syt1 |
Entrez Gene ID | 408613 |
Full Name | synaptotagmin 1 |
Synonyms | GB20036,Syti,syt |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
mRNA | Protein | Name |
---|---|---|
XM_026439452.1 | XP_026295237.1 | synaptotagmin 1 isoform X1 |
NM_001145735.1 | NP_001139207.1 | synaptotagmin 1 |
XM_026439483.1 | XP_026295268.1 | synaptotagmin 1 isoform X1 |
XM_026439523.1 | XP_026295308.1 | synaptotagmin 1 isoform X2 |
NM_001145735.2 | NP_001139207.1 | synaptotagmin 1 |
XM_026439512.1 | XP_026295297.1 | synaptotagmin 1 isoform X1 |
Finding the missing honey bee genes: lessons learned from a genome upgrade.
Elsik CG, Worley KC, Bennett AK, Beye M, Camara F, Childers CP, de Graaf DC, Debyser G, Deng J, Devreese B, Elhaik E, Evans JD, Foster LJ, Graur D, Guigo R, , Hoff KJ, Holder ME, Hudson ME, Hunt GJ, Jiang H, Joshi V, Khetani RS, Kosarev P, Kovar CL, Ma J, Maleszka R, Moritz RF, Munoz-Torres MC, Murphy TD, Muzny DM, Newsham IF, Reese JT, Robertson HM, Robinson GE, Rueppell O, Solovyev V, Stanke M, Stolle E, Tsuruda JM, Vaerenbergh MV, Waterhouse RM, Weaver DB, Whitfield CW, Wu Y, Zdobnov EM, Zhang L, Zhu D, Gibbs RA,
BMC genomics1586(2014 Jan)
A manual collection of Syt, Esyt, Rph3a, Rph3al, Doc2, and Dblc2 genes from 46 metazoan genomes--an open access resource for neuroscience and evolutionary biology.
Craxton M
BMC genomics1137(2010 Jan)
Insights into social insects from the genome of the honeybee Apis mellifera.
Nature443(7114)931-49(2006 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following Syt1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Syt1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHd00282 | |
Clone ID Related Accession (Same CDS sequence) | XM_026439452.1 , NM_001145735.1 , XM_026439483.1 , XM_026439512.1 | |
Accession Version | NM_001145735.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1305bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1464364800000 | |
Organism | Apis mellifera(honey bee) | |
Product | synaptotagmin 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from FJ550352.1. On Mar 12, 2009 this sequence version replaced XM_392154.3. ##Evidence-Data-START## Transcript exon combination :: FJ550352.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00113341, SAMN00120364 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001139207.1 |
CDS | 1..1305 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd34006 | |
Clone ID Related Accession (Same CDS sequence) | NM_001145735.2 | |
Accession Version | NM_001145735.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1305bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1539705600000 | |
Organism | Apis mellifera(honey bee) | |
Product | synaptotagmin 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from HP492262.1. On Sep 13, 2018 this sequence version replaced NM_001145735.1. ##Evidence-Data-START## Transcript exon combination :: HP492262.1, HP534412.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN00113341, SAMN00120364 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001139207.1 |
CDS | 4..1308 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00282 | |
Clone ID Related Accession (Same CDS sequence) | XM_026439452.1 , NM_001145735.1 , XM_026439483.1 , XM_026439512.1 | |
Accession Version | XM_026439452.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1305bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | synaptotagmin 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037638.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026295237.1 |
CDS | 333..1637 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00282 | |
Clone ID Related Accession (Same CDS sequence) | XM_026439452.1 , NM_001145735.1 , XM_026439483.1 , XM_026439512.1 | |
Accession Version | XM_026439483.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1305bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | synaptotagmin 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037638.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026295268.1 |
CDS | 333..1637 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00282 | |
Clone ID Related Accession (Same CDS sequence) | XM_026439452.1 , NM_001145735.1 , XM_026439483.1 , XM_026439512.1 | |
Accession Version | XM_026439512.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1305bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | synaptotagmin 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037638.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026295297.1 |
CDS | 480..1784 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd23150 | |
Clone ID Related Accession (Same CDS sequence) | XM_026439523.1 | |
Accession Version | XM_026439523.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1299bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | synaptotagmin 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037638.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_026295308.1 |
CDS | 333..1631 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCTGCCA TTAACAAGAG AGAAGCTGAG AAGGTGCCGG AAGAGCCACA ACCGGAGGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Finding the missing honey bee genes: lessons learned from a genome upgrade. |
Insights into social insects from the genome of the honeybee Apis mellifera. |