Gene Symbol | gbgt1 |
Entrez Gene ID | 100194757 |
Full Name | Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 |
Gene Type | protein-coding |
Organism | Salmo salar(Atlantic salmon) |
ORF » Species Summary » Salmo salar » gbgt1 cDNA ORF clone
Gene Symbol | gbgt1 |
Entrez Gene ID | 100194757 |
Full Name | Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 |
Gene Type | protein-coding |
Organism | Salmo salar(Atlantic salmon) |
mRNA | Protein | Name |
---|---|---|
NM_001139786.1 | NP_001133258.1 | Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 |
XM_014192409.1 | XP_014047884.1 | globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2 |
XM_014192410.1 | XP_014047885.1 | globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X3 |
XM_014192408.1 | XP_014047883.1 | globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1 |
Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome.
Leong JS, Jantzen SG, von Schalburg KR, Cooper GA, Messmer AM, Liao NY, Munro S, Moore R, Holt RA, Jones SJ, Davidson WS, Koop BF
BMC genomics11279(2010 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following gbgt1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the gbgt1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAt03174 | |
Clone ID Related Accession (Same CDS sequence) | NM_001139786.1 | |
Accession Version | NM_001139786.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1002bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1461340800000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BT044652.1. ##Evidence-Data-START## Transcript exon combination :: BT044652.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02864014, SAMN02864017 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGCGCTTTA GTTCAAATGT CAAGCCATAT GTTCTGCTTC TCATTGCTGG AATATTCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001133258.1 |
CDS | 198..1199 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGCTTTA GTTCAAATGT CAAGCCATAT GTTCTGCTTC TCATTGCTGG AATATTCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAt13126 | |
Clone ID Related Accession (Same CDS sequence) | XM_014192408.1 | |
Accession Version | XM_014192408.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 993bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1442678400000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012333571.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Salmo salar Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGCTATA TTAAGCCATA TGTTCTGCTT GTCATTGTTG GAACATTCTC GCTTCTGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014047883.1 |
CDS | 359..1351 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCGCTATA TTAAGCCATA TGTTCTGCTT GTCATTGTTG GAACATTCTC GCTTCTGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAt13127 | |
Clone ID Related Accession (Same CDS sequence) | XM_014192409.1 | |
Accession Version | XM_014192409.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 966bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1442678400000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012333571.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Salmo salar Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGCTTTA GTTCAAATGT CAAGCCATAT GTTCTGCTTC TCATTGCTGG AATATTCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014047884.1 |
CDS | 231..1196 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGCTTTA GTTCAAATGT CAAGCCATAT GTTCTGCTTC TCATTGCTGG AATATTCTCG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAt13128 | |
Clone ID Related Accession (Same CDS sequence) | XM_014192410.1 | |
Accession Version | XM_014192410.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 957bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1442678400000 | |
Organism | Salmo salar(Atlantic salmon) | |
Product | globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012333571.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Salmo salar Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCGCTATA TTAAGCCATA TGTTCTGCTT GTCATTGTTG GAACATTCTC GCTTCTGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014047885.1 |
CDS | 355..1311 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCGCTATA TTAAGCCATA TGTTCTGCTT GTCATTGTTG GAACATTCTC GCTTCTGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. |