Gene Symbol | IRF1 |
Entrez Gene ID | 396611 |
Full Name | interferon regulatory factor 1 |
Synonyms | IRF-1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
ORF » Species Summary » Sus scrofa » IRF1 cDNA ORF clone
Gene Symbol | IRF1 |
Entrez Gene ID | 396611 |
Full Name | interferon regulatory factor 1 |
Synonyms | IRF-1 |
Gene Type | protein-coding |
Organism | Sus scrofa(pig) |
Genome |
mRNA | Protein | Name |
---|---|---|
XM_021080244.1 | XP_020935903.1 | interferon regulatory factor 1 isoform X1 |
NM_001097413.1 | NP_001090882.1 | interferon regulatory factor 1 |
IRF1 up-regulates isg15 gene expression in dsRNA stimulation or CSFV infection by targeting nucleotides -487 to -325 in the 5' flanking region.
Li XQ, Li XN, Liang JJ, Cai XB, Tao Q, Li YX, Qin Q, Xu SP, Luo TR
Molecular immunology94153-165(2018 02)
Antiviral Activity of Porcine Interferon Regulatory Factor 1 against Swine Viruses in Cell Culture.
Li Y, Chang H, Yang X, Zhao Y, Chen L, Wang X, Liu H, Wang C, Zhao J
Viruses7(11)5908-18(2015 Nov)
Shear stress modulates VCAM-1 expression in response to TNF-α and dietary lipids via interferon regulatory factor-1 in cultured endothelium.
DeVerse JS, Sandhu AS, Mendoza N, Edwards CM, Sun C, Simon SI, Passerini AG
American journal of physiology. Heart and circulatory physiology305(8)H1149-57(2013 Oct)
Molecular characterization and association analysis of porcine interferon regulatory factor 1 gene.
Liu Y, Lu X, Luo YR, Zhou JP, Liu XY, Liu JF, Ding XD, Zhang Q
Molecular biology reports38(3)1901-7(2011 Mar)
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following IRF1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the IRF1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSe00371 | |
Clone ID Related Accession (Same CDS sequence) | XM_021080244.1 , NM_001097413.1 | |
Accession Version | NM_001097413.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 969bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1577203200000 | |
Organism | Sus scrofa(pig) | |
Product | interferon regulatory factor 1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EF011020.1. ##Evidence-Data-START## Transcript exon combination :: EF011020.1, AK232432.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA1487420, SAMEA1876824 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGCCCATCA CTCGGATGCG CATGAGACCC TGGCTAGAGA TGCAAATTAA TTCCAACCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001090882.1 |
CDS | 235..1203 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGCCCATCA CTCGGATGCG CATGAGACCC TGGCTAGAGA TGCAAATTAA TTCCAACCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OSe00371 | |
Clone ID Related Accession (Same CDS sequence) | XM_021080244.1 , NM_001097413.1 | |
Accession Version | XM_021080244.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 969bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1494518400000 | |
Organism | Sus scrofa(pig) | |
Product | interferon regulatory factor 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010444.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCCATCA CTCGGATGCG CATGAGACCC TGGCTAGAGA TGCAAATTAA TTCCAACCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_020935903.1 |
CDS | 347..1315 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGCCCATCA CTCGGATGCG CATGAGACCC TGGCTAGAGA TGCAAATTAA TTCCAACCAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
IRF1 up-regulates isg15 gene expression in dsRNA stimulation or CSFV infection by targeting nucleotides -487 to -325 in the 5' flanking region. |
Antiviral Activity of Porcine Interferon Regulatory Factor 1 against Swine Viruses in Cell Culture. |
Shear stress modulates VCAM-1 expression in response to TNF-α and dietary lipids via interferon regulatory factor-1 in cultured endothelium. |
Molecular characterization and association analysis of porcine interferon regulatory factor 1 gene. |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |