CAALFM_C400260WA cDNA ORF clone, Candida albicans SC5314

Gene
Clones
gRNAs

Summary

Gene Symbol	CAALFM_C400260WA
Entrez Gene ID	3645037
Full Name	histone demethylase
Synonyms	CaO19.5651
Gene Type	protein-coding
Organism	Candida albicans SC5314

mRNA and Protein(s)

mRNA	Protein	Name
XM_708239.2	XP_713332.2	histone demethylase

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure.
Muzzey D, Schwartz K, Weissman JS, Sherlock G
Genome biology14(9)R97(2013)

Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes.
van het Hoog M, Rast TJ, Martchenko M, Grindle S, Dignard D, Hogues H, Cuomo C, Berriman M, Scherer S, Magee BB, Whiteway M, Chibana H, Nantel A, Magee PT
Genome biology8(4)R52(2007)

The diploid genome sequence of Candida albicans.
Jones T, Federspiel NA, Chibana H, Dungan J, Kalman S, Magee BB, Newport G, Thorstenson YR, Agabian N, Magee PT, Davis RW, Scherer S
Proceedings of the National Academy of Sciences of the United States of America101(19)7329-34(2004 May)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CAALFM_C400260WA gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CAALFM_C400260WA cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OCg11097	XM_708239.2 Latest version!	Candida albicans SC5314 histone demethylase (CAALFM_C400260WA), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CAALFM_C400260WA ( XM_708239.2 ) cDNA ORF clone, Candida albicans SC5314 -> XP_713332.2 Candida albicans SC5314 histone demethylase (CAALFM_C400260WA), partial mRNA.

Price & Availability↑

CloneID	OCg11097
Clone ID Related Accession (Same CDS sequence)	XM_708239.2
Accession Version	XM_708239.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2172bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1522684800000
Organism	Candida albicans SC5314
Product	histone demethylase
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032092). On Dec 8, 2016 this sequence version replaced XM_708239.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends.

ATGCTGTTTG ATAAGAGGTT ATTAACTCCA TGCCCAGTTT TGACTCCAAC AGACCAAGAG 
TTTAATGATC CTGTTGGTTA TTTATCAAGT GACAAGGTTT CGAAGCTAGG TGCTACCTAC 
GGCCTAGTTA AGATTGTACC TCCTCCAAAT TGGAAACCAA GTTTCCACAT CAACCCTGAC 
TTTAAGTTCC ATGTTCGGAA ACAGGTACTC AGTGATTTGG GGATCACAAC CCGATCTAGA 
GATTTTTTCA GAGAAAATAT CAACCGGTTT TTGAAGATGA GAAGAAAGCG CCAGCTAAAG 
TTGTATTTTA ATGTTCAAGG CACCAGAGTA TACTACTATG ATTTGTATAG AGAAGTTGAA 
AATCTTGGTG AACCAATGGA TAAAGAAAAA TGGGAAAAGT TAGGAGCTCG GTTTGGTGTT 
AAGGCATCAG CATTAGAACG TGAATACGAT TCTACAATCA AATATTATGC TACTTATTTG 
CACACCAATT GCACCTATGA TTTTCCTGAA AGTGATTCAG AGGACGAATA CGATAGCTGT 
TTGGTGTGCG GACAACACGA CCACCCTCTG GAGACTTTGC TTTGCGACAA CTGTGATAAT 
CCGTATCATA TGAAATGTTT GAACCCACCT TTGGAGCTGG TCCCTGCTAC TAGCTGGTAC 
TGTGATAAAT GTTTGATCGG GACGGGAGAG TATGGATTCG ACGAAGATGT GGATGTCAAG 
TATACGATCC CTGAGTTTTA CAAAATGTGT CAGGATTTTG ATGCCAAATT CATTAGAGAC 
TACAATCAGA ACAACCCGTT GTCTGTAGAT GACATTGAAA GAAAGTTTTG GTCTTTTGTT 
GATGCCGAAA AGTCCGATTT GGAGGTGAAA TATGGTGCAG ATATCCATAA TTTGCGACCA 
GGTGAAGTTA GTGGGTTTCC TATGGCCGAC ACCCCTTCAT TGGATACAAC TGACCCTGCC 
ATACAGTATT ACATCAACCA CCCATGGAAC TTGAACAAAT TGCCGTTTTC CAATGGGTCA 
TTGCTCAACT TTATCAACAC CTCCATATCT GGAATGACCA TACCTTGGAT TTATATTGGG 
TCGTTGCTAT CGACATTCTG CTGGCATGTT GAAGATCACT ACACTTTATC GGCCAATTAC 
TGTCATTTTG GCGCTACAAA GAAATGGTAT GGTATTCCTT CTCTGTTTGC CGACAAATTT 
GAAAAGCTAA TGAGGGATTC AGCTCCGGAT TTGTTTAAGC GACAGCCGGA CTTGCTACAT 
CAGTTGGTAA CATTGATGTC GCCGCTGAAG TTGGTGGAAC ATGGCATACC CTGTGTATAC 
GCAGACCAAA ACCCTAATGA GTTTGTGATA ACATATCCTC TAGTGTACCA CGCAGGTTTC 
AATTGTGGGT TTAATTTCAA CGAAGCGGTG AATTTTGCCA TTGACGAATG GTTAGAGTTT 
GGGGAAAAAT CTGTTAATGA CTACAGGCCA ATAAAGAAAG AAAACGTGTT TAACCATTAC 
GAATTGTTGG AGAATATTCT AAGTCGATTC AATGCAAAAC ACGATGTGAG CTTAGATTTG 
GTAAAGCGAA GTTTATGGAG CTTTGAAAGA TATGTTTCCA GACTAGAGGA ATTACTAGCA 
CAGTTGAAGG ACAAGTCAAC TGTTGAATAC AAACCCTCTG TTGACAACAA CGACGAAGAC 
GATCTTTGTG ACTCATGCAA AACCCATATT GGCTTCCAAT ATTTTGTTCT TGAACCAGAA 
AACTCTAAAC AATTGTTGAC ACCCGATGCT TCTCCACAGG AGATTGAAAC AAAGCCAAAT 
AAGAATGAGG AGGCTAAGAA GGTTGCCAAT TCACAAGCAT CTCATGATCT TGCCAGCCTT 
AATGAAAGAA AGGCAATGGT GGACGAGTTC AACAGTCTAA TTGAAAAAGC CAAAAAAGAC 
GTTGATAATG ACGAGTCGAC AAAAGTACGA AGATCGAAAC GTATTCATAG TTTGAAGGAA 
AAAGAGGTTC CACAACGACC TACAAAACGA GCCAAAAAGA ATATCATAAA GAAAAAAGCA 
GCCCAATCAA AACTATGTTC AGAATGCGTT TGCCCTATGG AAGGGAAGCT GATACACGGC 
AAACTAGTAC TTCGGAAACA ACTCTCCACT TTAAAGGAAT TGATTGAAGA AACCAAAATG 
AATCTTGTAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_713332.2
CDS	1..2172
Translation	MLFDKRLLTPCPVLTPTDQEFNDPVGYLSSDKVSKLGATYGLVKIVPPPNWKPSFHINPDFKFHVRKQVLSDLGITTRSRDFFRENINRFLKMRRKRQLKLYFNVQGTRVYYYDLYREVENLGEPMDKEKWEKLGARFGVKASALEREYDSTIKYYATYLHTNCTYDFPESDSEDEYDSCLVCGQHDHPLETLLCDNCDNPYHMKCLNPPLELVPATSWYCDKCLIGTGEYGFDEDVDVKYTIPEFYKMCQDFDAKFIRDYNQNNPLSVDDIERKFWSFVDAEKSDLEVKYGADIHNLRPGEVSGFPMADTPSLDTTDPAIQYYINHPWNLNKLPFSNGSLLNFINTSISGMTIPWIYIGSLLSTFCWHVEDHYTLSANYCHFGATKKWYGIPSLFADKFEKLMRDSAPDLFKRQPDLLHQLVTLMSPLKLVEHGIPCVYADQNPNEFVITYPLVYHAGFNCGFNFNEAVNFAIDEWLEFGEKSVNDYRPIKKENVFNHYELLENILSRFNAKHDVSLDLVKRSLWSFERYVSRLEELLAQLKDKSTVEYKPSVDNNDEDDLCDSCKTHIGFQYFVLEPENSKQLLTPDASPQEIETKPNKNEEAKKVANSQASHDLASLNERKAMVDEFNSLIEKAKKDVDNDESTKVRRSKRIHSLKEKEVPQRPTKRAKKNIIKKKAAQSKLCSECVCPMEGKLIHGKLVLRKQLSTLKELIEETKMNLV

Target ORF information:

RefSeq Version	XM_708239.2
Organism	Candida albicans SC5314
Definition	Candida albicans SC5314 histone demethylase (CAALFM_C400260WA), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_708239.2

ORF Insert Sequence:

ATGCTGTTTG ATAAGAGGTT ATTAACTCCA TGCCCAGTTT TGACTCCAAC AGACCAAGAG 
TTTAATGATC CTGTTGGTTA TTTATCAAGT GACAAGGTTT CGAAGCTAGG TGCTACCTAC 
GGCCTAGTTA AGATTGTACC TCCTCCAAAT TGGAAACCAA GTTTCCACAT CAACCCTGAC 
TTTAAGTTCC ATGTTCGGAA ACAGGTACTC AGTGATTTGG GGATCACAAC CCGATCTAGA 
GATTTTTTCA GAGAAAATAT CAACCGGTTT TTGAAGATGA GAAGAAAGCG CCAGCTAAAG 
TTGTATTTTA ATGTTCAAGG CACCAGAGTA TACTACTATG ATTTGTATAG AGAAGTTGAA 
AATCTTGGTG AACCAATGGA TAAAGAAAAA TGGGAAAAGT TAGGAGCTCG GTTTGGTGTT 
AAGGCATCAG CATTAGAACG TGAATACGAT TCTACAATCA AATATTATGC TACTTATTTG 
CACACCAATT GCACCTATGA TTTTCCTGAA AGTGATTCAG AGGACGAATA CGATAGCTGT 
TTGGTGTGCG GACAACACGA CCACCCTCTG GAGACTTTGC TTTGCGACAA CTGTGATAAT 
CCGTATCATA TGAAATGTTT GAACCCACCT TTGGAGCTGG TCCCTGCTAC TAGCTGGTAC 
TGTGATAAAT GTTTGATCGG GACGGGAGAG TATGGATTCG ACGAAGATGT GGATGTCAAG 
TATACGATCC CTGAGTTTTA CAAAATGTGT CAGGATTTTG ATGCCAAATT CATTAGAGAC 
TACAATCAGA ACAACCCGTT GTCTGTAGAT GACATTGAAA GAAAGTTTTG GTCTTTTGTT 
GATGCCGAAA AGTCCGATTT GGAGGTGAAA TATGGTGCAG ATATCCATAA TTTGCGACCA 
GGTGAAGTTA GTGGGTTTCC TATGGCCGAC ACCCCTTCAT TGGATACAAC TGACCCTGCC 
ATACAGTATT ACATCAACCA CCCATGGAAC TTGAACAAAT TGCCGTTTTC CAATGGGTCA 
TTGCTCAACT TTATCAACAC CTCCATATCT GGAATGACCA TACCTTGGAT TTATATTGGG 
TCGTTGCTAT CGACATTCTG CTGGCATGTT GAAGATCACT ACACTTTATC GGCCAATTAC 
TGTCATTTTG GCGCTACAAA GAAATGGTAT GGTATTCCTT CTCTGTTTGC CGACAAATTT 
GAAAAGCTAA TGAGGGATTC AGCTCCGGAT TTGTTTAAGC GACAGCCGGA CTTGCTACAT 
CAGTTGGTAA CATTGATGTC GCCGCTGAAG TTGGTGGAAC ATGGCATACC CTGTGTATAC 
GCAGACCAAA ACCCTAATGA GTTTGTGATA ACATATCCTC TAGTGTACCA CGCAGGTTTC 
AATTGTGGGT TTAATTTCAA CGAAGCGGTG AATTTTGCCA TTGACGAATG GTTAGAGTTT 
GGGGAAAAAT CTGTTAATGA CTACAGGCCA ATAAAGAAAG AAAACGTGTT TAACCATTAC 
GAATTGTTGG AGAATATTCT AAGTCGATTC AATGCAAAAC ACGATGTGAG CTTAGATTTG 
GTAAAGCGAA GTTTATGGAG CTTTGAAAGA TATGTTTCCA GACTAGAGGA ATTACTAGCA 
CAGTTGAAGG ACAAGTCAAC TGTTGAATAC AAACCCTCTG TTGACAACAA CGACGAAGAC 
GATCTTTGTG ACTCATGCAA AACCCATATT GGCTTCCAAT ATTTTGTTCT TGAACCAGAA 
AACTCTAAAC AATTGTTGAC ACCCGATGCT TCTCCACAGG AGATTGAAAC AAAGCCAAAT 
AAGAATGAGG AGGCTAAGAA GGTTGCCAAT TCACAAGCAT CTCATGATCT TGCCAGCCTT 
AATGAAAGAA AGGCAATGGT GGACGAGTTC AACAGTCTAA TTGAAAAAGC CAAAAAAGAC 
GTTGATAATG ACGAGTCGAC AAAAGTACGA AGATCGAAAC GTATTCATAG TTTGAAGGAA 
AAAGAGGTTC CACAACGACC TACAAAACGA GCCAAAAAGA ATATCATAAA GAAAAAAGCA 
GCCCAATCAA AACTATGTTC AGAATGCGTT TGCCCTATGG AAGGGAAGCT GATACACGGC 
AAACTAGTAC TTCGGAAACA ACTCTCCACT TTAAAGGAAT TGATTGAAGA AACCAAAATG 
AATCTTGTAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure.
Genome biology14(9)R97(2013)
Muzzey D,Schwartz K,Weissman JS,Sherlock G

Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes.
Genome biology8(4)R52(2007)
van het Hoog M,Rast TJ,Martchenko M,Grindle S,Dignard D,Hogues H,Cuomo C,Berriman M,Scherer S,Magee BB,Whiteway M,Chibana H,Nantel A,Magee PT

The diploid genome sequence of Candida albicans.
Proceedings of the National Academy of Sciences of the United States of America101(19)7329-34(2004 May)
Jones T,Federspiel NA,Chibana H,Dungan J,Kalman S,Magee BB,Newport G,Thorstenson YR,Agabian N,Magee PT,Davis RW,Scherer S

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CAALFM_C400260WA cDNA ORF clone, Candida albicans SC5314

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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