Gene Symbol | rtGEF |
Entrez Gene ID | 411626 |
Full Name | rho-type guanine exchange factor |
Synonyms | GB14745 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
ORF » Species Summary » Apis mellifera » rtGEF cDNA ORF clone
Gene Symbol | rtGEF |
Entrez Gene ID | 411626 |
Full Name | rho-type guanine exchange factor |
Synonyms | GB14745 |
Gene Type | protein-coding |
Organism | Apis mellifera(honey bee) |
mRNA | Protein | Name |
---|---|---|
XM_016917490.1 | XP_016772979.1 | rho-type guanine exchange factor isoform X1 |
XM_016917491.2 | XP_016772980.2 | rho-type guanine exchange factor isoform X2 |
NM_001278329.1 | NP_001265258.1 | rho-type guanine exchange factor |
XM_016917490.2 | XP_016772979.2 | rho-type guanine exchange factor isoform X1 |
XM_016917491.1 | XP_016772980.1 | rho-type guanine exchange factor isoform X2 |
Finding the missing honey bee genes: lessons learned from a genome upgrade.
Elsik CG, Worley KC, Bennett AK, Beye M, Camara F, Childers CP, de Graaf DC, Debyser G, Deng J, Devreese B, Elhaik E, Evans JD, Foster LJ, Graur D, Guigo R, , Hoff KJ, Holder ME, Hudson ME, Hunt GJ, Jiang H, Joshi V, Khetani RS, Kosarev P, Kovar CL, Ma J, Maleszka R, Moritz RF, Munoz-Torres MC, Murphy TD, Muzny DM, Newsham IF, Reese JT, Robertson HM, Robinson GE, Rueppell O, Solovyev V, Stanke M, Stolle E, Tsuruda JM, Vaerenbergh MV, Waterhouse RM, Weaver DB, Whitfield CW, Wu Y, Zdobnov EM, Zhang L, Zhu D, Gibbs RA,
BMC genomics1586(2014 Jan)
Insights into social insects from the genome of the honeybee Apis mellifera.
Nature443(7114)931-49(2006 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following rtGEF gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the rtGEF cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OHd17981 | |
Clone ID Related Accession (Same CDS sequence) | XM_016917490.1 | |
Accession Version | XM_016917490.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1917bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1463932800000 | |
Organism | Apis mellifera(honey bee) | |
Product | rho-type guanine exchange factor isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003378356.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Apis mellifera Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTTTA TATATTCATT TTTAAATTTG TTTTTGAATT GTTTTTTCTT TCTTTATTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016772979.1 |
CDS | 393..2309 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGTTTTTTA TATATTCATT TTTAAATTTG TTTTTGAATT GTTTTTTCTT TCTTTATTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd17982 | |
Clone ID Related Accession (Same CDS sequence) | XM_016917491.1 | |
Accession Version | XM_016917491.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1629bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1463932800000 | |
Organism | Apis mellifera(honey bee) | |
Product | rho-type guanine exchange factor isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003378356.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Apis mellifera Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACTT CTCCTGAAAA AATTCTGCAA GAATCCCCTG TGCATCAAAA ATTAAATCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016772980.1 |
CDS | 312..1940 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGACTT CTCCTGAAAA AATTCTGCAA GAATCCCCTG TGCATCAAAA ATTAAATCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd23155 | |
Clone ID Related Accession (Same CDS sequence) | XM_016917490.2 | |
Accession Version | XM_016917490.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1911bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | rho-type guanine exchange factor isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037638.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 19, 2018 this sequence version replaced XM_016917490.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTTTTTTA TATATTCATT TTTAAATTTG TTTTTGAATT GTTTTTTCTT TCTTTATTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016772979.2 |
CDS | 393..2303 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTTTTTA TATATTCATT TTTAAATTTG TTTTTGAATT GTTTTTTCTT TCTTTATTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd23156 | |
Clone ID Related Accession (Same CDS sequence) | XM_016917491.2 | |
Accession Version | XM_016917491.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1623bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537200000000 | |
Organism | Apis mellifera(honey bee) | |
Product | rho-type guanine exchange factor isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037638.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 19, 2018 this sequence version replaced XM_016917491.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Apis mellifera Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACTT CTCCTGAAAA AATTCTGCAA GAATCCCCTG TGCATCAAAA ATTAAATCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016772980.2 |
CDS | 312..1934 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAAGACTT CTCCTGAAAA AATTCTGCAA GAATCCCCTG TGCATCAAAA ATTAAATCGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OHd00301 | |
Clone ID Related Accession (Same CDS sequence) | NM_001278329.1 | |
Accession Version | NM_001278329.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3306bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1537286400000 | |
Organism | Apis mellifera(honey bee) | |
Product | rho-type guanine exchange factor | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AADG06009520.1. On May 28, 2013 this sequence version replaced XM_395095.4. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMN00008880, SAMN00113341 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGTTTTTTA TATATTCATT TTTAAATTTG TTTTTGAATT GTTTTTTCTT TCTTTATTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001265258.1 |
CDS | 248..3553 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTTTTTA TATATTCATT TTTAAATTTG TTTTTGAATT GTTTTTTCTT TCTTTATTCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Finding the missing honey bee genes: lessons learned from a genome upgrade. |
Insights into social insects from the genome of the honeybee Apis mellifera. |