Gene Symbol | FOXA1 |
Entrez Gene ID | 101837622 |
Full Name | forkhead box A1 |
Synonyms | HNF3a |
Gene Type | protein-coding |
Organism | Mesocricetus auratus(Golden hamster) |
ORF » Species Summary » Mesocricetus auratus » FOXA1 cDNA ORF clone
Gene Symbol | FOXA1 |
Entrez Gene ID | 101837622 |
Full Name | forkhead box A1 |
Synonyms | HNF3a |
Gene Type | protein-coding |
Organism | Mesocricetus auratus(Golden hamster) |
mRNA | Protein | Name |
---|---|---|
XM_005080517.2 | XP_005080574.1 | hepatocyte nuclear factor 3-alpha isoform X2 |
XM_005080517.3 | XP_005080574.2 | hepatocyte nuclear factor 3-alpha |
XM_013120831.1 | XP_012976285.1 | hepatocyte nuclear factor 3-alpha isoform X1 |
Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters.
Ying B, Toth K, Spencer JF, Aurora R, Wold WS
Virology485305-12(2015 Nov)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following FOXA1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the FOXA1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMe134476 | |
Clone ID Related Accession (Same CDS sequence) | XM_013120831.1 | |
Accession Version | XM_013120831.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1329bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1436630400000 | |
Organism | Mesocricetus auratus(Golden hamster) | |
Product | hepatocyte nuclear factor 3-alpha isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801703.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAACTCCG GCCTGGGCTC CATGAACTCC ATGAACACCT ACATGACCAT GAACACCATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012976285.1 |
CDS | 24..1352 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGAACTCCG GCCTGGGCTC CATGAACTCC ATGAACACCT ACATGACCAT GAACACCATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe134477 | |
Clone ID Related Accession (Same CDS sequence) | XM_005080517.2 | |
Accession Version | XM_005080517.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1305bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1436630400000 | |
Organism | Mesocricetus auratus(Golden hamster) | |
Product | hepatocyte nuclear factor 3-alpha isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801703.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Jul 13, 2015 this sequence version replaced XM_005080517.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAACTCCG GCCTGGGCTC CATGAACTCC ATGAACACCT ACATGACCAT GAACACCATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005080574.1 |
CDS | 24..1328 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGAACTCCG GCCTGGGCTC CATGAACTCC ATGAACACCT ACATGACCAT GAACACCATG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMe252632 | |
Clone ID Related Accession (Same CDS sequence) | XM_005080517.3 | |
Accession Version | XM_005080517.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1404bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 1495296000000 | |
Organism | Mesocricetus auratus(golden hamster) | |
Product | hepatocyte nuclear factor 3-alpha | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004801703.1) and transcript sequence (GDQJ01025108.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 22, 2017 this sequence version replaced XM_005080517.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Mesocricetus auratus Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 199 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGTTAGGGA CTGTGAAGAT GGAAGGGCAT GAGAGCAGCG ACTGGAACAG CTACTACGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005080574.2 |
CDS | 130..1533 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGTTAGGGA CTGTGAAGAT GGAAGGGCAT GAGAGCAGCG ACTGGAACAG CTACTACGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. |